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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN31523_c2_g5_i3
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		beta-TrCP_isoform_X1_[Bombyx_mori]
Ontology
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0000209 P protein polyubiquitination
GO:0002223 P stimulatory C-type lectin receptor signaling pathway
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006470 P protein dephosphorylation
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007165 P signal transduction
GO:0008013 F beta-catenin binding
GO:0016032 P viral process
GO:0016055 P Wnt signaling pathway
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0019005 C SCF ubiquitin ligase complex
GO:0030163 P protein catabolic process
GO:0031146 P SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0031648 P protein destabilization
GO:0033598 P mammary gland epithelial cell proliferation
GO:0038061 P NIK/NF-kappaB signaling
GO:0038095 P Fc-epsilon receptor signaling pathway
GO:0042752 P regulation of circadian rhythm
GO:0042753 P positive regulation of circadian rhythm
GO:0043122 P regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043433 P negative regulation of DNA-binding transcription factor activity
GO:0045309 F protein phosphorylated amino acid binding
GO:0045862 P positive regulation of proteolysis
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046983 F protein dimerization activity
GO:0048511 P rhythmic process
GO:0050852 P T cell receptor signaling pathway
GO:0051403 P stress-activated MAPK cascade
GO:0051437 P obsolete positive regulation of ubiquitin-protein ligase activity involved in regulation of mitotic cell cycle transition
GO:0051726 P regulation of cell cycle
GO:0060444 P branching involved in mammary gland duct morphogenesis
GO:0060828 P regulation of canonical Wnt signaling pathway
GO:0061136 P regulation of proteasomal protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
GO:0071407 P cellular response to organic cyclic compound
Transcript
Level		FPKM:15.38 TPM:8.56
ORF EntryO_BomoIG100586_complete:A_BomoIG_DN31523_c2_g5_i3
Sequence
(Nucleotide)
CACAATTACATAAGTATTTTATTGTTTACTTATTCTGAAGTATTCCATCTTTATATCCTA
TATATTTCTTCTGTGCGTGTTTTTGTCACTAAACTCCTAAACGGTTCGACCGATTTGAAT
GTTTTTTTTTTGTATGCGTTTGTATGGCGCCCTGGATGGTTTAGATTCACAAATCAGCCC
GGCAGTTGGCGCTGCAGTCGGTATCTAGGTTATTTATCTATACTACAACCAAACGGATGG
ATCGACTTGAACGAATTTTCGCAGGACAACTTCTGTCGGGTCCGCTAATTTAATATAATT
TAACTAGCTCTTTAAAATATTTCTCACTCAGTCTTTCAATTTAGTAATCAATTTAGTATC
AAATTTTTTTTTTCTTGGTTCACTTCTGTCGAATGTCTTCCACGGGTTCCTACCACAAAC
TTTGTTTCTAATGTCATTGACATAGTGACGTCACGAATCAAACATGGCGTGCCGAGTTTT
CCCGCGCTAAAAAAATTTTTTTTTTCTGTTTAACAAATACATAATTCTTCACCGCGCGTA
TAAATCTTAATATCCATCACAGATGAAGAGTTTATAGTCGAGCTTTTTTTATTTTAATAT
TTCTCTTTCGTCAAAGGTCAAAAAAACAAAAAATCTCAGGAGATTCCGTTTTGCATCTTT
TTTTTCTCTCTCTCTCTCTTTCTCTCTCATCTTACATTTATTCATTTACGTTGTAAATAT
ACCTTAGTAACTACTAAGCGTCGACACTATTTATAAACTTTCATTTCGCTAAAAAAAAAA
CAAAACGAACCAACTTTACAACAATTATTTCATGTTTTGTCCCATATTTTAGTTAGTTTT
TTTTTCTTTCTTGTTTTCTTTTTTTAATTATTTTTTCTTTCTCTCTCTTTTTAATCTATT
TAATTACTTACATCCCTCATTAATTTAATAATTAATTCTCTTTAACGTTTAAACTTTTTA
AAAAAAAAACGTAGTCTCATTGTGGTCTTAGAATGTTACCGGGGGGCGGCGCTAGTCGAA
CAGGTCCCTATCTGCGGGCGAGCGCGCGCGCGGCGGGGGCGAGGCGCCGCTGTAGTTGAG
GAAGTCCCACACGAGGATGGTGTCGTCGTGCGACGAGGACACGATCTGGAACTCGTCGAA
CTGAAGACGGAACACGCGTCCCGTGTGCTCGACTAAGGTCCGCAGACAGAGGTCCTGGTG
CGGCGTCCGCACGTCCAGCGCGGCCGGCAGGTCCCACACCTTGATCTTCCCGTCGTAAGC
GCCGCTCACGATTCGCTTATTGTCAAACCGTATGCAGCGCACGAGCTCCTCGTGCCCCTC
GAGCACCCGGATGCACGAGCCGCACTCGATGTCCCACAGCCGGATGGTGTTGTCCGAGGA
CCCCGACACGACGAGCCGGTCCCGGTACTGCAGGCACGCGATCCCGCGCTTGTGCCCGTT
CAGCGTGCGCACGAACTCGCACGACGACGTGTTCCACACTTTTATAGTTCTATCACCGGA
CGCACTGACAATATATTTCTCGTCAAAGTCAACGACATTGACAGCGGCCCTGTGTCCCAC
CAGCACTCGCCTCAGCATTATCTCCGTCGTCGACGTCATATCCCACACGGCTATCGAACG
ATCCTTGCTGCAAGTGACCATCATCCCGTTGCAGAAGCGCAGGTGCAGCACCGCCTCGCA
GTGGTGGATGAGCGTGTTGAGCATGGCGCCCGTGGACACGTCCCACACGCGCACGGTGGA
GTCCGACGAGCCGGATATGATGGCGCGCTCGTCGTACTGCAGGCACAGAACCGACCCCGT
GTGACCTTGCAGCTCTCTGACGCACTGCAGTGTCTTTCTGTCCCATATTTTTATTGTGTT
ATCTCTAAGGCCCGATACTATCTTATTGTCGTCGTACTGTAAGCAATATACGCCTTTGGA
ATTCTCCGATCTGCAGTTTATCCTCTGTAAATTATGTTTTCCCATTCTCCAATTGTCCTC
TATAGATTGTATGTCCTTTATTATCTTGGGATATAGTTGTCTGTAGAATGAGTGTGACGG
ATGTTGGCAGCCAGGCTTCGGTTTGAACAGGTACTGTATCCATCCCCTCCGCTCGGCGAG
GCCGCGCCACAGCGAATCCGTACGGACCTTCCTCTCGATGAGCTTCTTCCACAGCATCCC
TTCCGATATCACCCTCAACCACTCGCGGCAAACCAACTCGGCCGCACATAGAGAGCTCGC
GTCCAGGTACGACAGTATGTTCTCTGCGACGTGGTCCAGGCCTTTTTTGGGCAGCATACT
GATGAAATCCCTTTGTAGCATCGGTTTGAGGTAGGCATTGATGTGACCGTGCTGGTAGTG
GCACATCCTAGCCAGGAGTTGCTCCACGAATTCCACCTGATCTGTCTCGTTCCATCTTGT
GAAGTAGTTGAGGCATGCGTCCCTTTCCGCCGCGTACGCAGGGCTGCTGGGCACCGGTCT
GACGCCGCTGTCCAAACTTGTCAGTGACGTCACCTGAGGTGGTATTGTATCCTCTATCAT
CTTTTCAGTCTCCATTTTCACTATTTATTATTTAACATTAATAATTGTCCACTAAAACAC
CTCTAATATATACAAAACCACAATCGCTAAACACACATCGTTCGAATGACGTCAAGTACA
ACAATGTTTTAAAG
(2654 bp)

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