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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN31389_c2_g1_i3
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		endoplasmic_reticulum_mannosyl-oligosaccharide_1,2-alpha-mannosidase_[Bombyx_mori]
Ontology
GO:0004571 F mannosyl-oligosaccharide 1,2-alpha-mannosidase activity
GO:0005509 F calcium ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006491 P N-glycan processing
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0036508 P protein alpha-1,2-demannosylation
GO:0036509 P trimming of terminal mannose on B branch
GO:0044322 C endoplasmic reticulum quality control compartment
GO:0046872 F metal ion binding
GO:0097466 P ubiquitin-dependent glycoprotein ERAD pathway
GO:1903561 C extracellular vesicle
GO:1904380 P endoplasmic reticulum mannose trimming
GO:1904382 P mannose trimming involved in glycoprotein ERAD pathway
Transcript
Level		FPKM:9.16 TPM:5.10
ORF EntryO_BomoIG12591_complete:A_BomoIG_DN31389_c2_g1_i3
Sequence
(Nucleotide)
GTCGAGGCTACTGTCAGTGTCACTGACTGCAAGACATACCTACCTAAATCTACTTCTAAT
TCACGCGTTTGGCACTTTGGTATTTCTTTCCTAAACATAATTGTATTAAATTTTATTTTT
ATATATGAATACATTTATAGGGATATATTAAAAATATTTAAATATATTAGATGTATACCT
ATATACATAAATACATTTATAGCTCTAATTAAAAATCCAAAAATACATTTCTGGATCAAA
ATGATGGTGAATATACTGAAACCTTAAATAACTGAACTTTCAATATGAGACAGCAAAACT
TAGAGACACATCTAAATTTTAATATAAATAATCATACAAATAATGTTAATGATAGAAAAT
GGGTCACCAATGGAGAGACAGCAATATTACTTAATGATCCAGCAATATCACATACTAAAA
TTATAAGGAAATGGAATCGTCTATCACGTCTTCAGAGATCCATAGTGTATGCTGTGCTAG
TTGTGACTGCAACAGCTCTTTTGTTGCTGTATTTTTCTAAAACTGGTATTGTCATCATTG
AGCGAGGCAATGAAGATTCAGTTCAGGAAAAATTAAGAAACACATCTCTAAATGCCAAAC
CTGCATTGGACAACACAGTTCAAATAAAATATGATCCTACAGTGTATGAGAGGCCTGTTT
TTACAGGACCAAAAAATGATCGGCAACGGGCATTGGTGGAAAGTTTTAGACATGCATGGA
GAGGGTATAAAGAGCATGCTTGGGGCCATGACAATCTAAAACCAGTCTCTGGTATGGCTT
CTGACTGGTTCTCTCTTGGACTTACAATTGTTGACAGTTTGGATACAGCTTACATAATGG
GACTAACTGATGTATTTGAGGAAGGCAAGCAATGGATCAAAGAAGAACTAATATTCACAA
AAAATAAAGATGTTAATTTCTTTGAAGTCACCATTAGAATACTAGGTGGCTTGTTAACAA
ATCATTATTTCACTCAAGACCAGCTATTTCTTGATAAAGCTATTGACCTCGGAGACCGTC
TCATGGCAGCATTTTCGTCACCATCTGGCATCCCATACTCTGATGTGAACTTGGGAGCTA
GAACTGCTCATGCTCCTGAATGGTCACACTACAGCACCACAGCTGAAGTTACTACTGTGC
AGTTGGAGTTTAGGCAACTGTCCAGAGCTAGTGGCAACCCTATATTCGAGGAGGCAGCAG
CAGCCGTTTCCGAGAAGATTCATCAGCTACCAAAAAAACATGGACTTGTTCCAATATTTA
TTAATCCGAATACAGGACATTTTCTGCCTCACGCCACCATCACTCTCGGAGCAAGAGGGG
ATAGTTATTATGAATACCTGCTAAAACAATGGCTCCAGACTGGGAAAACAATCAACTAGT
AAGTCCATTTTCATATTAAGCTAATGCGATTAGGACTTAACAAATTGCGTGACTTGCAAT
AGCGGACAAAGGCGAGATCGGAAGAG
(1466 bp)

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