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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN31389_c1_g3_i7
Scaffold_idBomo_Chr6
NCBI non-redundant
(nr)		eukaryotic_initiation_factor_4B_protein_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0001731 P formation of translation preinitiation complex
GO:0002181 P cytoplasmic translation
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003743 F translation initiation factor activity
GO:0005844 C polysome
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0016281 C eukaryotic translation initiation factor 4F complex
GO:0033592 F RNA strand annealing activity
GO:0034057 F RNA strand-exchange activity
GO:0043024 F ribosomal small subunit binding
GO:0044822 F RNA binding
GO:0097010 P eukaryotic translation initiation factor 4F complex assembly
Transcript
Level		FPKM:0.16 TPM:0.09
ORF EntryO_BomoIG12586_complete:A_BomoIG_DN31389_c1_g3_i7
Sequence
(Nucleotide)
CCGCTACAGGTTAGTTCATATAATTTTGGCACGTGAAAAAAGTTTGAAATTTACACTATT
TCCTTCATTAATTTAATTTATTTTACAAGTATTTCTAATGTCACAGTAAATCACTCTACG
GGCAAATCAATTGCAAGAAGTCAAAGAAGGCAAAATGGATCAAAGCCGACATCACAAGCA
TTATAGCAGAACCGACCACAATCGCAACTACCAACAATTGGGCGAACGCTGCAGAAGATG
AAACGGAAAATTTTGGATATGCATCGCATACACGGGCACCAGTTGTACTGCCTTCAGCTT
CTCGTGCAGCACGAGGAGGCTTGGCAGTTGATGATGAGTCAATACCACATCGCCCCCCAT
TTATTGCACACATCTCTAATCTGCCTTATGATGTTGAAGAAAGTGCTATTGCAGAGTTAT
TTGCTGACCTTAAGGTTACCAACTTAAGACTTCCAAGAGAGGGTGACAGACTCAAAGGTC
ATGGATATGTTGATTTTGAAGACAGAGAAAATTTAATTGAAGCTCTCAATATGCCAGACT
TGACAATAGGTGGCAGGAGAGTACGAATTGAGGTGTCTACTCCAGATGACCGTCGAATGG
GACGAAGTGGACGCTCTGATAGAGATAGGGACTATGACCCTGAGCGTACAATGGGTGACT
GGCGCTCCGGACCCCGCGCTGTACCCGACGCGCCCGGCCGCCCTCGTCCTCCCAATGACA
GAGAACGAGATCGGGATCGGGATCGCGAAAGAGACTCGAGTGCAGATAACCGTCCGGGAG
CCTGGCGCGACGCCGAGCGAGCCCCCGAGCCCGCGCGGGCCCCCTACGGCGGGAGGGACT
CCTTCGGACGTGACCGCTATGGAGAGGATAGAGGTAGAGATCGGGGTTATGGTGGACGAG
ATGGATTCCGTGCTGCACCAGACCGTGAAGGAGGATTCAGCAGAGATAGTAGAGGATTCG
GCGGCAGAGGTTTTGGCGATCGTGATCGTGACCGGGACCCACCTCCAAGAGAAGACACAA
AACCTCGTGAACGTCCTAAGTTGAATTTGTTACCGCGCACTGTGCCTCGCGAGACCGAAG
CCCCCACCAAGCCCGCCGACGGAGCGCCCCTGGAGGAAAAACAAGAGAAACAGGCTCCGA
AGCCGGTGCCTGCTGAAAAAGTGTTTGGCGGCGCTAAACCTGTTGACACTGCTGCTAAGG
AAAGAGAAATTGAAGAGCGTCTACGAAAACAGGAAGAAGAAGCCAGACGCGTTGCTGAAG
AAAAAGAACGTTGGGGGGGACGTAGAAATGATCACTCTGGAGATCGTCGTGGAGGTGCTA
GAAGAGACGATCGCGGCAGAGATTCGCGAAGCTTCAACAGGGAGCGACGAGATTATTCTA
AGGACGACAAGGATCGGCGCGACGACCGAGAAAAAAGGGACTACAGGGACGATAGAGACA
GGCGCGACTACAACAGGGACAGTAGAGATCGGCGCGATCCCAAAGACGAGAGAGAACGCA
GAGACTACACCCCCGACCGACGGGACCCCTCGCCCGCCTCGCCAGCGCGCAGGAGAGATT
CCGTAGAGCGCGATCAAGAAAGAAACGGACGACCCAGTCGTTCACGTGATCGACGCGACG
ACACTGACGAGAAACCACTGCCCAAATTAAAAGAACAAGAAAAACCCAATTTCGTTGCAT
CCAACAAGTTTAGCTTCCTTGAAGACGCCGACGACGCTGCATCTGAATAACACTCGTATA
GACGTGTGAAATATTTTGTGTCCGTTCTGCAAGTGACCAGAGTGTAAAGTGTAAATTTAT
CGAGTGACTGACGCACGACGGAACTGTACGTGGCACCGAGACGATCGTTTACATTGTGCT
ATGTGATATAGAACTCGACTAATCATAGTGCGGTGTGGTTTATCATATGTGTATATTAAT
TAGGGTTTGTTACATGCTCACGCAGCTTCGAGGTCTGCCCCAGTCTTTACTGTAGTGACC
TGATATTCGATAAAATTATATCATCGACAAAAGGTTGTTTTTAAATCTGTGCAGTTGCAA
CATTAAAGACTGGGGCTCTCATATTTGCAACCATTTTATACTAATTGGTGTAAATTCACG
ATGAGTTTTTTTACAAATATAGATGAAGCTGATTAATTAAAAATCATTGGAATCCGAAAG
TTCCATTTCCTCAATTTTACAATAAAACAGGTGCTGCCTCTTTGTCGTGTTTTGTTTTCT
TGCAAATTTATCATGTATTTGATTTCTTTTCGAGTAGGAGTAATATTATTATGAATTGAG
TGTGAAACTCAACAATACACCACTATTATTATGATTATTATTATTATTTTATAGGAATCT
TTCTCATTTCTTTGTTTCCGTTGTGCTAAAGGGATCTATTTATAAACCGCGATATACGGG
GTATACCCGCCACAGAATCGTGATGAACAAACGTCTTCTTGCGATACAACACATTTTGTT
AATTTAGCACTCGTATTAATGTTGTCATATTATTATTTACTATGCTTGAAGCATCATTTA
AATAGTAATTGTAATTAAAACTGATGTGAAAATTTTAATCAATGTTTTATTGGAGTGAGA
AAAACGTTAAAGGAACAATAGTACCCCGCGTAGTCAACGTTAAAGCTTTCAAAGTAGTAA
TTCATATCTGTATTTGTTACTTTCATTCGATTCCCATCTTTTAATTAAGTAACTTTCGTA
ATCGCGACGCTGATTGAAAAGATTATTTTGCATTACACTTGTAATACACAAAAGATAACT
CATCAAAAGAGTGAATTTTAAATCTCATGAGACGGTAAAAAAATATATTGAGACTGTCTA
GATAGTGTTAATTCGCCTTATTCCATTTTTCTCTGAGTACCCCGACACATCTAGAAACTA
CATTTTCG
(2888 bp)

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