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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN31389_c1_g3_i1
Scaffold_idBomo_Chr6
NCBI non-redundant
(nr)		eukaryotic_initiation_factor_4B_protein_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0001731 P formation of translation preinitiation complex
GO:0002181 P cytoplasmic translation
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003743 F translation initiation factor activity
GO:0005844 C polysome
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0016281 C eukaryotic translation initiation factor 4F complex
GO:0033592 F RNA strand annealing activity
GO:0034057 F RNA strand-exchange activity
GO:0043024 F ribosomal small subunit binding
GO:0044822 F RNA binding
GO:0097010 P eukaryotic translation initiation factor 4F complex assembly
Transcript
Level		FPKM:49.63 TPM:27.64
ORF EntryO_BomoIG12531_complete:A_BomoIG_DN31389_c1_g3_i1
Sequence
(Nucleotide)
GGTAGATAAAGTGGGTTCTGCAGTGGCAACTCCAACCCCAGCCTTTTAATATGGCCGCTA
CAGGCAAGAAGTCAAAGAAGGCAAAATGGATCAAAGCCGACATCACAAGCATTATAGCAG
AACCGACCACAATCGCAACTACCAACAATTGGGCGAACGCTGCAGAAGATGAAACGGAAA
ATTTTGGATATGCATCGCATACACGGGCACCAGTTGTACTGCCTTCAGCTTCTCGTGCAG
CACGAGGAGGCTTGGCAGTTGATGATGAGTCAATACCACATCGCCCCCCATTTATTGCAC
ACATCTCTAATCTGCCTTATGATGTTGAAGAAAGTGCTATTGCAGAGTTATTTGCTGACC
TTAAGGTTACCAACTTAAGACTTCCAAGAGAGGGTGACAGACTCAAAGGTCATGGATATG
TTGATTTTGAAGACAGAGAAAATTTAATTGAAGCTCTCAATATGCCAGACTTGACAATAG
GTGGCAGGAGAGTACGAATTGAGGTGTCTACTCCAGATGACCGTCGAATGGGACGAAGTG
GACGCTCTGATAGAGATAGGGACTATGACCCTGAGCGTACAATGGGTGACTGGCGCTCCG
GACCCCGCGCTGTACCCGACGCGCCCGGCCGCCCTCGTCCTCCCAATGACAGAGAACGAG
ATCGGGATCGGGATCGCGAAAGAGACTCGAGTGCAGATAACCGTCCGGGAGCCTGGCGCG
ACGCCGAGCGAGCCCCCGAGCCCGCGCGGGCCCCCTACGGCGGGAGGGACTCCTTCGGAC
GTGACCGCTATGGAGAGGATAGAGGTAGAGATCGGGGTTATGGTGGACGAGATGGATTCC
GTGCTGCACCAGACCGTGAAGGAGGATTCAGCAGAGATAGTAGAGGATTCGGCGGCAGAG
GTTTTGGCGATCGTGATCGTGACCGGGACCCACCTCCAAGAGAAGACACAAAACCTCGTG
AACGTCCTAAGTTGAATTTGTTACCGCGCACTGTGCCTCGCGAGACCGAAGCCCCCACCA
AGCCCGCCGACGGAGCGCCCCTGGAGGAAAAACAAGAGAAACAGGCTCCGAAGCCGGTGC
CTGCTGAAAAAGTGTTTGGCGGCGCTAAACCTGTTGACACTGCTGCTAAGGAAAGAGAAA
TTGAAGAGCGTCTACGAAAACAGGAAGAAGAAGCCAGACGCGTTGCTGAAGAAAAAGAAC
GTTGGGGGGGACGTAGAAATGATCACTCTGGAGATCGTCGTGGAGGTGCTAGAAGAGACG
ATCGCGGCAGAGATTCGCGAAGCTTCAACAGGGAGCGACGAGATTATTCTAAGGACGACA
AGGATCGGCGCGACGACCGAGAAAAAAGGGACTACAGGGACGATAGAGACAGGCGCGACT
ACAACAGGGACAGTAGAGATCGGCGCGATCCCAAAGACGAGAGAGAACGCAGAGACTACA
CCCCCGACCGACGGGACCCCTCGCCCGCCTCGCCAGCGCGCAGGAGAGATTCCGTAGAGC
GCGATCAAGAAAGAAACGGACGACCCAGTCGTTCACGTGATCGACGCGACGACACTGACG
AGAAACCACTGCCCAAATTAAAAGAACAAGAAAAACCCAATTTCGTTGCATCCAACAAGT
TTAGCTTCCTTGAAGACGCCGACGACGCTGCATCTGAATAACACTCGTATAGACGTGTGA
AATATTTTGTGTCCGTTCTGCAAGTGACCAGAGTGTAAAGTGTAAATTTATCGAGTGACT
GACGCACGACGGAACTGTACGTGGCACCGAGACGATCGTTTACATTGTGCTATGTGATAT
AGAACTCGACTAATCATAGTGCGGTGTGGTTTATCATATGTGTATATTAATTAGGGTTTG
TTACATGCTCACGCAGCTTCGAGGTCTGCCCCAGTCTTTACTGTAGTGACCTGATATTCG
ATAAAATTATATCATCGACAAAAGGTTGTTTTTAAATCTGTGCAGTTGCAACATTAAAGA
CTGGGGCTCTCATATTTGCAACCATTTTATACTAATTGGTGTAAATTCACGATGAGTTTT
TTTACAAATATAGATGAAGCTGATTAATTAAAAATCATTGGAATCCGAAAGTTCCATTTC
CTCAATTTTACAATAAAACAGGTGCTGCCTCTTTGTCGTGTTTTGTTTTCTTGCAAATTT
ATCATGTATTTGATTTCTTTTCGAGTAGGAGTAATATTATTATGAATTGAGTGTGAAACT
CAACAATACACCACTATTATTATGATTATTATTATTATTTTATAGGAATCTTTCTCATTT
CTTTGTTTCCGTTGTGCTAAAGGGATCTATTTATAAACCGCGATATACGGGGTATACCCG
CCACAGAATCGTGATGAACAAACGTCTTCTTGCGATACAACACATTTTGTTAATTTAGCA
CTCGTATTAATGTTGTCATATTATTATTTACTATGCTTGAAGCATCATTTAAATAGTAAT
TGTAATTAAAACTGATGTGAAAATTTTAATCAATGTTTTATTGGAGTGAGAAAAACGTTA
AAGGAACAATAGTACCCCGCGTAGTCAACGTTAAAGCTTTCAAAGTAGTAATTCATATCT
GTATTTGTTACTTTCATTCGATTCCCATCTTTTAATTAAGTAACTTTCGTAATCGCGACG
CTGATTGAAAAGATTATTTTGCATTACACTTGTAATACACAAAAGATAACTCATCAAAAG
AGTGAATTTTAAATCTCATGAGACGGTAAAAAAATATATTGAGACTGTCTAGATAGTGTT
AATTCGCCTTATTCCATTTTTCTCTGAGTACCCCGACACATCTAGAAACTACATTTTCG
(2819 bp)

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