SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN31378_c0_g1_i15
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		serine/threonine-protein_phosphatase_6_regulatory_ankyrin_repeat_subunit_A_isoform_X1_[Helicoverpa_armigera]
Ontology
GO:0005198 F structural molecule activity
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0006887 P exocytosis
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0007010 P cytoskeleton organization
GO:0007165 P signal transduction
GO:0008093 F cytoskeletal anchor activity
GO:0010638 P positive regulation of organelle organization
GO:0014731 C spectrin-associated cytoskeleton
GO:0016020 C membrane
GO:0016323 C basolateral plasma membrane
GO:0016529 C sarcoplasmic reticulum
GO:0019899 F enzyme binding
GO:0030018 C Z disc
GO:0030507 F spectrin binding
GO:0030673 C axolemma
GO:0031430 C M band
GO:0031672 C A band
GO:0042383 C sarcolemma
GO:0043005 C neuron projection
GO:0045199 P maintenance of epithelial cell apical/basal polarity
GO:0045211 C postsynaptic membrane
GO:0051117 F ATPase binding
GO:0072661 P protein localization to plasma membrane
Transcript
Level		FPKM:1.16 TPM:0.64
ORF EntryO_BomoIG11748_complete:A_BomoIG_DN31378_c0_g1_i15
Sequence
(Nucleotide)
AGCTGATGGTGATGACGGGTTGCACACAAATCAATATCTTGCTCCCAATGAGAACTTACG
CCCAGCAGGGCCTTGCTTTCTTCTGTATGATTCCCCGGACAGTGGTTTGATCCATTGCGG
AACAAATGCTTGTCGTTTATTTCGCTGATTTTCTATTTTATGAGAAGAAGAAAGTAATTT
GTCAAATGTTTTTTATTTAATTTTTGTTTTTAATGTGAATGTTATGGTGATGAGTATTAT
GATGTTTGAACAAAGTAAACGAACAGACTCACCGTCTGAGAAAAGTTTTCTTCTGGCTTG
GCTTGCATACTTATTGTCTTCACTTTTATTAATATTTCTGAATGGCTGATTCAATGCTAC
TATATGCATCGAGAATCCAAATACAAAAATCGCTAAAACTGCTAAAAATCTGCCCAAATC
TTTCATGAGATCTCCTATAATTATCGCCCATGGACCGAACAGATGATGGAAGGATAAGAA
GTCCAAAATTTGGACACAAGCTAATAGAAAAGATAGAGCAAAGCATTGATTCCTACAATA
CATTAAAGTTGGCCAATATTTAGGTTGGATGAATATCCAGCCCACAACGTGTGTCGCCAC
CCCGATCATACCTAGTAACAAAACTGCTATTTTAATCCACCCTAACCCTGACTTATCACT
AGGATTCGTTAATTCTAATAATAAAAGACCACTCAACGATATGAGCAGCATCCACTCATA
CCAACGCGGTATTAAACTATCCCTAAATATCGAATTATAAATAGGTGTGATTGCTACTAA
TGCTAATAATACCATCAAATATATGTGCGCTGTTAAATACGACATGAACTTAATTATTGG
AATCTTATGATATCTATGACCTAAGGGAAGAGAGAACACCATCCAAACTGGTGGACAGAC
TATAAATGCGAAAAAAAGGAACATAATTTTGATGCCGGTCCATTTGAGACTCCCTCTCCA
GAGTTCCTGTAAAAGAATAAGCAAAAATATAATTCGCGGTATGTTTGCATTACGAAACTT
TGGTGTAGTAGAGAAGTTACCTATTTTTTACCTGAAGATATCTCTGGACAACTGTGTGGG
CGATTACTTCTTTTTGTTCGTTTTCTATTAGAACATCCAAGAATTCAATGTTTCGGTTAT
CCGTGGCAGTGAGTATGTGTCCGGCAGAGTCGGCCCCCGCCGCTAGAGCCAGCAGTTCGG
TCGCCATCGCCTCACATTGTTTCCCTGCCGCTATAAGGTCTTTGGCACGCTCCTTTTCCT
TAGTCGATAAATTGATGTAAATATTCGATAACTTGGCAGCCGTGTCGACCGGCGCCGGTG
ATACCAAAACGAATTCCTCTATAGGAATGTTATTGTGGTTCTTAGAACAAACCATGAGGT
TGTAGACAAACCTCTTGTCGTCCATCAGTGACTGAGTATCGTGTTCTTTGTGGAGTAAAT
ATTCAAGAACGTCGTTGTGGTTTTCCGAAGCGGCGAACCATATAGGGGCGCAATTTAGAT
TGGTCTCACTTTTTGGAGATGCTCCGGATTCACAAAGTAGTTTCACGACGTTCAAGTGAC
CAGCTTTTGCTGCACAGTGCAATGGTGTCCATCCGTTTTTATCGGTAGCGTTTATTTCTG
CTCCTTGACCCAACAAGACCTCAACCATTTGATAATGTCCGTGTGTTGATGCAATGTGTA
AACCAGTTTTTCCGTGCCTGTCAGTACTGTGTAGTAGTTCTGCTGATCTACTTAATAGAA
GTCCTACTATGGACATATGGCCTCCGAAACATGCTAGATGTAATGGATTATAGCCATTTT
CGTTACTAGCTGCATCCGCTTGGACACCGGCAGAGTTGAGGAGTAATCGGACCACGTTCT
CGTTACCGTTATATGCAGCCAAATGGAGAGGTGTCAAACCAGATTCAGCTCCTAATACTG
GGACCAATGAGACTCCCGTAGGAGCCTCAGATTTCACAGTACCGGGAACGTGAGATAGAA
GTTCTCTTACAGTTTCAGCTTGTCCATAATACGCTGCAATATGTAATGGAGTCAATCCCA
ACTTTTTGCTAGATATCCTTAAAGTATTCGTTGATCTCATAACATCCAATACATTAGTGT
GTCCATGCTCTGCTGCCAAGTGTACAGCAGTGAGGCCGGCTCTGTTTTCATCAGTACACG
ATGCTCCGGCTCTCACAAGCACCCTTACAACATCTGCATGACCACCTTCCGCTGCTAGTT
GCAAAGGCGTTGAATCATTCAGTTTATTTCGAGCTGAAATAACTCCAGTCCTATCGAACT
TCATTAATTCCTCGATCACTTTAACAGAGCCTTGTATGGCTGCAATATGAGCGCACGTGT
TTCCATCTTTAGTTGTTGCCATTACCAAGTTGGGGTGCTGTTGTAAAAACAATTGAACGA
CTTCTGAATAGTTATTTTGTGCAGCTGCGTGTATCGGTTTTTGTCCGAGCTCATCGGTCG
CATCAATATTCGCACCAAGTTCTAATAGAAGCTTACATACTTCGATCTGACCACTAGCAG
CTGCCAAATGTAGTGGAGTTTGCTTTTTCAAGGTTAGAACGTCTATCATAGCGTTGTGGT
CTCTAATAAGAAACTTGACTAGATGTGCGTATCCGTTCATTGCTGCCAAATGAAGAGCCG
TTCTGCCGTTTCGTGCTTTTGAATTTATGAAAGCTTTATTTGTTAGTAGTGCGTCACATA
CTTGTAGGTATCCGTGCTCAGCTGCCAAATGCAATGCGGATCTGCCTTCGACGTCGAATA
CGTCAACTCGGGCGTGGTTTGTTAATAATGTATTTACGAGTTGCATATGTCCTCTGTGAC
AGGCTATTAGAAGAGGCGTCCACCCTATTGAATTTTGTCTATTGAGCGCTCTGCTGACGT
CCGCAGTTGAGATATGCGCGATCATTTCAGTCATGACGTCATTATTACCAGCAATAGCGC
AATAATGAAAAGCCGTTTCGTGGTTATGCCTTGTTTGCAGAGACACATCTGCGCCGTTTT
CTATTAAGCATTTGACAACCTGTCTATCTGCTGTAGGTATTTTAACTTCTTCTTTGGTAA
CTTTACAAGCGTAATGCAATGCGCTGGCTCCATCCTCGTCTACTGCGTCTATAAATGCCG
TAGACACGCTTTCTCCTTTGTGGTCTTTTACGAATTCTATTAAGTGTCGCACAATATCTG
GCATGCAGCTTCGACAGGCCATTTGTAAAGGCGTTTCTCCTGTTTTAGTTTTCCGCAAAG
GGTCTCCACCGTCTTCCAGTAGTAAGACCAGCGTTGCCAGATTTCCAAATTTGGCGGCGA
CATGTACAGGCGTCATGCCATCTTCTGTCGCCTTGTTTGGGCCAGCCCCGGACTTTAGCA
ACATCAGCGCGCATTTGTCTCCATCAGGTATCCTAGCAGCTATGTGGAGAGGAGTTTCTC
TTTGTTTTCCACCTCGAATATGAACGTCTGCGCCATACCCTAAAAGAGTTTCTACCACTG
CTGGTTTACACGACTCAACTGCAATATGGAGAGCTGTGTAGTTATCATTGGTCGTGACAT
CAACACTTTCCCCTTTCTGCAACAACGTATTGATGATCCCAACATGGCCATAACGAGCCG
CTGTGTGGATACTCCGCGCTCCATCCTTGTTGGGCATGTGTAGGTAGACACCTTTCTTGA
AAAGCATCATGGCGCAATCCGCGTGGCCATTGAGTGACGCAATGTGCATCAAAGTGCTGC
CGTCCTTGGTCCTCTCGAAGATCGAAGCCTTAAACTTGTCCGCCAGTAGTTCAATGATGG
CAGCATGACCATTCTCCGCTGCTAAATGCATTGGAGTTCGATCCTCATTATCAGCAATCG
CAGCGTTAGCCCTGACTCCGTAGAAGTACTTTACTAAGGGCTCATCGCCTTCAGCTGCGG
CTATATGTAAAGGTGTTTGTCCAGCGCCATTCGTAGCATCGACTACTGCTCCGTAGTCCA
CTAAGATCCTGGCCATGTCTACGTCCCTCCTTCTGGCAGCTAGATGCAGAGCGGTGTCTC
CGGCAGGGGTCGTCGCCTTCAGTTGTTCAGCCGTTTGTGCGCTTAGCAGCTCTCGGACCA
TGCTCTGGTTCCCGGCCTCCACCGCGAGCAGCAGCGGGACCTTGCCTCTTCCATCAGCTC
GTAGGCGTATATCTTTTCCGGCGGCAGTCAGGAGTGCTCTAAGTATGCTCGTGGCCGTTC
CTGTTTGCCTGCTCGCCACTATGTGGACTGCTGTCTGCTGTCGACTCCCGCCGGTGGCAA
AAGGATCGACTCCCCTTTTCGAGAGTAGTAGCTTGACAATATCTTCCCTCGAGTACATAG
CTGAGATGTGGAGTACATTGTAGTTGTCATTGTTTCTGGCTCCAACGTCAGAACCCAGTT
CGATGAGGCGCTCCACAAACGATGTCCGGTTATCTTTGACCGCGTACATGAGCGGCGTCA
TACCCGTAGCGGGATCAAGTATCCCCGCCATAGGGACACTGATGGCATCTTCTCCCCCAG
CAGCCACCAGCTTCTCCAAGACCTTGAGCGTTTGCTCGACGGCCGGCCATTCTCCTTTTT
GGGCCAAGGTCAAGATCTTCCCGGCCACGTCGCGAATGTTGACACCGGCGCTGGGCGGCT
TGACCACCTCCGCTCCATTGACTTCCTTGACTTCCTTCTTCTCTCCATTGTTCGAGGCCG
TTTCGTCTTTCTCTTCTGCAGGCTTCGCAGGTGCGTTCTTGTCTTCTTCGGTGTTCTTCT
TTGGCGGGCCTTTGCCGCCCTTTTTGCCGCCCGCGGCCTGCGACATCCTCACACATTAGT
AGCACACGGTATCACCGCACTCGGAGTCACGGGGGAGCACATTGGTTCCGTGCGAGTGTT
ACTCGTAGGGC
(4871 bp)

- SilkBase 1999-2023 -