SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN31367_c0_g1_i1
Scaffold_idBomo_Chr18
NCBI non-redundant
(nr)		histone-lysine_N-methyltransferase_setd3_isoform_X1_[Bombyx_mori]
Ontology
GO:0000790 C chromatin
GO:0003713 F transcription coactivator activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008168 F methyltransferase activity
GO:0010452 P histone H3-K36 methylation
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0018022 P peptidyl-lysine methylation
GO:0018023 P peptidyl-lysine trimethylation
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0018026 P peptidyl-lysine monomethylation
GO:0018027 P peptidyl-lysine dimethylation
GO:0032259 P methylation
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046975 F histone methyltransferase activity (H3-K36 specific)
GO:0051568 P histone H3-K4 methylation
Transcript
Level		FPKM:23.50 TPM:13.09
ORF EntryO_BomoIG12265_complete:A_BomoIG_DN31367_c0_g1_i1
Sequence
(Nucleotide)
TTTTTGACATTGACATTATTCTTTAGTTGACACTTGACATGTAATCTGACTAAACTCAAC
ACTTTCCAATGAAAGTGATTTCAAAACTTTATTCCATTTAAACCTATTTTTAGCTATTTA
ATAATTCCACGTTTCTAATTCCCTTCACATAAGCCAGTAGCTTTCTCCTTTAATCTTAAT
TAGATAAATTAAAATAATGGGACGAAAATCGCAATCAAAACAAAACCAAAAGAAATCCAC
TGGAAAGGAAAATAATAAATTATACCTACAGAAAAGAAAAGAATTAGCTTTTCTTGTTGA
TAGAGTGCTAAGACTTACCAGTATATTTCAAGCGACTGGTAACGTAAGCAAAAGTTGGGA
ACATCATTTAGAAATCGAGAAATTAGTGAATGAAATTACTAACATAGAAGGAACGCAGTT
AAGAAATACTCGAACTCTTCGGCAAACTCACATTGATAAATATTTGCAGTGGCTAAGAGA
AAACGGTGTCCAATTCGATGGGATTGAAATAGCGGAATTCAAAGGATATGATCTTGGTCT
TAAAGCTTTGAAAGATTTCACTGAAGGATCTCTGATTTTAACCATACCATCCAAAGTTAT
GATTACAGAGAAAAATGCCAAAGAATCTGAACTATCAGCATTTATTGCTGTCGATCCTCT
TTTACAGAATATGCCAAATATTACTTTAGCCCTATTCCTATTACTTGAAAATAATAACCC
AGATTCATTCTGGAAGCCGTACATTGAGGTTTTGCCTGAAAAATATTCTACCATTTTATA
CTACACATCTGAAGAACTTGAACTATTGAAACCATCGCCAGTGTTTGAATCATCACTAAA
ACTTTACAGAAGTATAGCCAGACAGTATGCATACTTTTATAAAAAGATTCACACACTCGA
TATACCAGTGCTGAAGAAACTTCAAGAAGTTTTCACTTTTGATAGTTACAGGTGGGCAGT
CTCAACCGTGATGACAAGGCAAAACAATATAAGACTTTCGGAAGCTGACGTCACAGCGTT
CATACCGCTATGGGATATGTGCAACCATGAACACGGCGAGATAAGAACGGACTACAACAA
CGAACTAAATAGAGGCGAATGCTACGCGCTCCGCGATTTTAAAACCGACGAACAAATCTT
CATATTCTACGGAGCTCGTCCTAACGCAGACCTGTTTCTACACAATGGTTTTGTTTACCC
GAATAATCAGCACGACAGCCTATCTGTAACACTCGGCATTAGCTCGGGCGATCCTCTGCG
AGAGATAAAAATGTCTCTGCTCACGAAGCTAGGGCTGGGCTGCGTCACGCACTACTCTCT
GTTCAAACGACAGAATCCAATCGGACCAGAACTATTGGCGTTTATAAGGATCTTCAATAT
GAATCAGGAGGAACTAACGAAATGGTCCAGTCAAAGTCTTCCAAGCGACCTTGTGTCGTC
GGAGCCGAGCAGCGCTGAGGCGGTAGGCGCCGACATCGACCGTCGAGCCCACACGTATCT
ACTGACGCGGTGCAAACTGCTACTAGCTGCATACAAGAAAAACGACAACGAAAATCGCAC
AGAAACCGATCATGTTTCCAACGTGAAACTCTTGAAACAATGCGAAGTACAAATACTGGA
AGCTACTGTTACGTACCTGGAAGAAACTATACGAACACTACCCACCGCGGTTAAACAATA
AGTCGGATGTACTTATTAGCGAATTTATGAAAACGTGGTAATAAAAAATTCTATTTTGTA
TTTATTTTATATAATTATGTATAAGCTGCAATATTTATTTCTCAGGATATTTATGTTCAC
ACATTTTGGCAACACAAACGACAGTAGGATTCGTGTTGATGTTGCCATTAATTACTTTGA
AAAATCTACGCCGCTTATGGATTTTATTCTTTATCGTGAATAGATAGATAGATAGACCTT
TTTTATTTCTAGAATGGTCTATCAAAGCCGCGCTTTCTCAACCTATGAACAAAATCATGA
CAGTATTCGAAGAATTATTTACATTTTTTTATTCTATTTTAAGTATTTAGTGATTAACAC
AGCGAATTTTTTATATATTTAAGTTTGTTATTTTTATTCGAGGTATGCGATGATTCAGTG
TGAACTTTGTTTTTACTGATTTTGTTTACTATTAATAAGTTTTATGTCTTATGAATTTCA
AACAATATGGCAACACTGTAAATTCTCCGAATGAATACCATTTGTTGTTCAATGGGTTAC
CCCATGGATTTAGAATTTTTTAAATTAAGAAATTATTTCTTTAATGAAACATTATTGAAA
TATTCACACTTGACCACTGTGTTCATCGCTTAGTTGAAATGAACCTACTACTATTGTGTT
ACATGTGTTTTTTTACTGTTTTTATTTGTACTTATGTTGGAAGGCAGTGCAATTTTTTAT
CGTAAATAAATGTTTTTCGTTGTAAAAAAAAAAAAAA
(2437 bp)

- SilkBase 1999-2023 -