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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN31365_c2_g3_i6
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_DNA-directed_RNA_polymerase_II_subunit_RPB1_[Bombyx_mori]
Ontology
GO:0001055 F RNA polymerase II activity
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005665 C RNA polymerase II, core complex
GO:0005700 C polytene chromosome
GO:0005703 C polytene chromosome puff
GO:0006351 P transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0046872 F metal ion binding
Transcript
Level		FPKM:0.04 TPM:0.02
ORF EntryO_BomoIG12863_complete:A_BomoIG_DN31365_c2_g3_i6
Sequence
(Nucleotide)
GTTGCGCCCCTACATTGATTTAGTTGATTAGTATTGTGCTACACAACAGCGACACGATGA
AGATCATCAGTTACGAAAATTGATAAAGGCTTACCAAAACAGAACGGTCATCACAGTGAT
GAATACTTGAAAAAACAACACTATTAACGTTGGATTACTTTGAAACTGCGTCTGTTCACT
TTCTATTTTGATTTCATATAGATGTAAAAATTATGATTTACAGCGACGCATGTCAGTTAC
TGAGGGAGGGATTCGATTCCCGGAGACCATGGAAGGTGGAAGACCGAAGCTTGGCGGTCT
TATGGATCCTCGACAAGGGGTAATTGACAGAAGCTCACGGTGTCAAACGTGTGCTGGGAA
TATGACAGAATGTCCAGGACACTTTGGGCACATTGATTTAGCTAAACCAGTTTTCCATAT
TGGTTTCATAACAAAAACAATAAAAATACTCAGATGTGTATGCTTTTATTGTTCAAAGCT
GCTTGTCAGCCCTACAAATCCAAAGATAAAAGAAGTTATAATGAAATCCAAGGGCCAACC
CCGCAAACGGTTGACCTATGTTTATGATCTGTGCAAAGGAAAAAATATATGTGAAGGTGG
TGAAGACATGGATATTGGGAAAGAAGGTGAAGAAGGTAAAAGAGGATCTGGTCATGGTGG
TTGTGGGCATTATCAACCCTCTATTAGACGACAAGGTCTAGAGCTCACAGCTGAGTGGAA
ACATGCTAATGAAGATACACAAGAAAAGAAAATTTTTGTCTCTGCAGAAAGAGTATGGGA
AATTTTGAAACATATAACAGATGAAGATTCATTTATTTTGGGTATGGATCCAAATTTTGC
AAGACCAGATTGGATGATTGTGACGGTTTTGCCTGTCCCTCCATTGTGTGTTCGTCCAGC
TGTTGTTATGTTTGGCTCTGCCAAAAATCAAGATGACTTAACCCACAAGCTAGCTGATAT
AATAAAAGCTAACAATGACTTGGAAAAAAATGAGCAGTCTGGAGCTGCTGCTCATGTCCT
TGCAGAGAATATAAGAATGTTACAATTTCATGTTGCTACTTTTGTTGACAATGACATGCC
TGGTATGCCAAAAGCTATGCAGAAATCTGGGAAGCCCTTAAAGGCTCTCAAAGCCAGATT
GAAAGGAAAAGAAGGAAGAATTCGAGGAAATCTAATGGGGAAACGTGTTGACTTCTCAGC
TAGGACAGTAATCACACCTGATCCAAATTTACGTATAGATCAAGTTGGGGTTCCCAGATC
AATTGCTCAAAATATGACATTCCCAGAGTTGGTGACTCCATTTAATCTTGATAGAATGCA
AGAACTTGTCCGAAGAGGAAATGCACAATACCCTGGGGCAAAGTACATTGTAAGAGAAAA
CGGAGAAAGAATTGATTTAAGATTCCATCCTAAATCTTCAGATTTACATTTACTCTATGG
TTACAAAGTAGAAAGACATCTAAGAGATGATGACCTTGTTATATTTAATCGTCAACCAAC
TCTTCACAAAATGAGTATGATGGGTCACAGAGTTAAGGTACTTCCTTGGTCAACGTTTCG
TATGAATTTGAGTTGCACATCACCTTACAATGCTGATTTTGATGGAGATGAAATGAATTT
GCATGTTCCTCAATCAATGGAAACAAGGGCTGAAGTTGAAAATATTCATATAACACCTAG
ACAAATTATAACTCCACAGGCTAATAAACCTGTAATGGGTATTGTGCAGGACACATTGAC
TGCCGTTAGAAAAATGACTAAGAGAGATGTTTTTTTAACAAAAGAACAAGTAATGAATCT
TCTTATGTTTTTACCTACATGGGATGGTAAAATTCCTCAACCTTGCATTTTGAAACCACA
GCCTTTATGGACAGGTAAACAAATATTCACTTTAATAATACCTGGTCCTGTTAATATGAT
TCGAACTCACTCTACTCATCCTGATGAAGAAGATGATGGTCCTTACAAGTGGATTTCTCC
AGGAGATACCAAAGTTGTTGTAGAACATGGAGAACTACTAATGGGTATTTTGTGTAAAAA
GTCGCTTGGTGCATCTGCTGGCTCTCTGTTGCATATTTGCATGTTGGAATTAGGCCATGA
AACTGCTGGACGATTCTACGGTAACATTCAGACTGTCATTAATAACTGGCTTCTGTTGGA
AGGTCACTCAATTGGTATTGGTGACACTATTGCTGATCCACAGACATATCAAGAAATTCA
GCGTGCAATCGTAAAAGCTAAAGATGACGTAATAGAAGTCATTCAGAAAGCCCACAATAT
GGAATTGGAACCCACACCTGGTAATACACTAAGGCAGACCTTTGAAAATCAAGTGAACCG
TATCCTCAATGATGCTCGTGATAAAACAGGTGGATCTGCTAAGAAATCATTAACAGAATA
CAATAATCTCAAAGCTATGGTAGTTGCTGGCTCGAAAGGTTCAAACATTAATATTTCACA
AGTCATTGCTTGTGTAGGCCAACAGAATGTTGAAGGAAAACGAATCCCATTTGGATTTAG
AAAACGCACCTTACCCCACTTTATTAAAGATGATTATGGTCCTGAATCCAGAGGTTTTGT
TGAAAACTCTTATCTAGCTGGTCTGACTCCTTCAGAATTCTATTTTCACGCCATGGGTGG
ACGTGAAGGTTTAATTGATACTGCTGTAAAAACTGCTGAAACTGGATACATTCAACGGCG
TCTCATTAAAGCCATGGAGTCTGTAATGGTCCACTATGATGGTACAGTTAGAAACTCTGT
TGGACAACTTATTCAATTGAGGTATGGTGAGGACGGTCTCGCAGGAGAGACAGTAGAATT
CCAGAACCTGCCGACTGTTAAATTGTCAAATAAAGCATTTGAAAAGAAATTCAAATTTGA
CTCTTCCAATGAGAGATATCTGAAGAGAATTTTCAGTGAAGACATAGTCAGAGAGCTAAC
AGAATCTGGAAGTGTCATAGCTGACCTTGAAAGTGAGTGGGAACAACTTTCTAAAGACAG
AGAAACATTACGTCAGATTTTCCCAACGGGAGAATCTAAGGTTGTATTGCCATGTAATTT
CAAGAGAATGATTTGGAATGCTCAGAAAACATTCCACATAAACAAGAGAATACCAACAGA
CTTAAGCCCTATCAAAGTTATAAAAGGTGTATCAGACCTTCTAAAGAAGTGTGTCATTGT
AGCTGGTGATGATCGTTTGTCTAAGCAAGCCAATGAGAATGCTACATTACTTTTCCAATG
CTTAGTGAGATCAACACTTTGTACAAAATTTGTATCTGAAGAACATAGATTATCTAGTGT
AGCATTTGAATGGCTTATCGGGGAAATAGAGGCAAGATTCCAGCAAGCACAAGTAAATCC
AGGTGAAATGGTAGGCGCTTTAGCTGCTCAATCACTTGGTGAGCCAGCTACTCAGATGAC
ATTGAATACCTTCCATTTTGCTGGTGTATCATCCAAAAATGTAACACTTGGTGTGCCTCG
TCTGAAGGAAATCATCAACATTTCTAAGAAACCAAAGGCTCCTTCTCTAACTGTATTTTT
GACCGGTGGAGCAGCCAGAGATGCCGAAAAAGCCAAAAACGTTCTCTGTAGATTAGAACA
TACAACTTTACGTAAAGTTACTGCTAACACGGCTATTTATTATGACCCTGATCCTCAGAA
TACTGTTATTGCAGAGGACCAAGAATTTGTCAATGTTTACTACGAAATGCCTGACTTTGA
TCCTGCGAAAATTTCGCCTTGGTTATTGCGTATTGAACTGGACCGTAAGAGAATGACCGA
CAAGAAATTAACAATGGAACAGATTGCTGAGAAAATTAATGCTGGTTTTGGTGATGATCT
CAATTGTATCTTCAATGATGACAATGCTGAAAAGTTAGTTTTGCGAATTAGAATCATGAA
TAATGAAGAAAGTAAATTCCAAGATCATGATGAAGAGACAGTAGACAAAATGGAAGATGA
CATGTTCTTAAGATGTATTGAAGCAAACATGCTGTCTGATATGACTTTGCAAGGCATTGA
GGCTATTGCAAAAGTGTATATGCATTTACCACAGACAGAAGCTAAGAAACGTATAACTAT
AACTGAACAGGGAGAGTTCAAAGCTATAGCAGAATGGTTATTGGAAACAGACGGCACATC
TCTTATGAAAGTGCTCTCAGAGCGTGATGTGGATCCAATCAGAACTTTTAGTAACGACAT
TTGTGAGATATTCCAAGTGCTTGGAATTGAAGCTGTACGAAAATCCGTCGAAAAAGAAAT
GAATGCGGTTTTGCAGTTCTACGGTCTATACGTGAATTATCGACACTTGGCATTGCTTTG
TGACGTCATGACAGCAAAAGGTTATCTTATGGCCATCACACGTCACGGCATTAACCGACA
GGACACTGGTGCTCTTATGAGATGTTCATTTGAGGAAACCGTCGATGTTTTATTGGACGC
TGCCAGTCATGCTGAAGTGGATCCTATGAGAGGAGTATCAGAAAATATTATAATGGGACA
GTTGCCGAGAATGGGTACTGGTTGCTTCGATTTATTACTTGATGGCGAGAAGTGCAAGGA
AGCAATGGGCGGTCTTGGAGGCGCAGAAGTGGGAATGTATTTCGGTGTCGGAACGCCATC
TATGTCACCACTTATGACTCCCTGGTCTACACAGAATACACCAGGATATGGAAGCAGCGT
GTGGTCTCCATGTCAAGTTGGCAGCAGTATGACTCCTGGAGGACCATCATTCTCGCCATC
TAACGCATCTGACGCATCAGGACTCTCACCGGCATACAGTAATGCTTGGTCACCACAACC
TGGTTCACCAGGATCTCCCGGACCTCCGCTTTCACCTTACTCGTCGCCCGCAGGAGCGTC
ACCATCTTACTCCCCATCGAATCCTGTTTACGCTCCCGCGTCCCCGAGTATTACTCCAAC
ATCACCACATTATTCACCTGCCAGTCCTTCTTACTCTCCAACTTCACCCAATTATTCCCC
GACTTCACCAATATACTCGCCAACATCACCCAGCTACTCGCCAACATCGCCTGGTTATTC
GCCCACATCCCCATTATACTCCCCAGCTTCTCCTAGATACTCTCCGTCATCTCCCAACTA
TTCACCAGCAAGTCCGGCTTATTCAACAACTTCTAATTTCCCGACAACTTCACCTAACTA
TTCTCCATCAAGTCCTTCGTATTCTCCCACGAGTCTATCGTATTCTCCAACGAGCCCAGG
TTATTCCACATCCCCTGGCTATTCGCCCTCGTCACCTAGATATTCACCAAATAGTCCTGT
CTACAGTCCTACTTCATCAAATTATTCGCCTTCGTCTCCAAATTACACTTCTGGATCTGT
TTATTCACCTACGAGTCCTACATATTCACCTACTTCTCGCTCATATTCTCCATCATCACC
GAGCTATTCGCAGTCTTCTCCAAATTATTCACCCTCGTCACCGAATTATTCTCCTACTTC
GCCCTCTGTGGCTGGAGGTAGTCCTACATATTCACCAACAAGTCAGCAATATTCTCCAAC
CAGTCCACAGTATTCTCCGACTAGTCCAGGCTATTCTTCTACATCACAACATCCTAGTAG
CACTAGGTATTCGCCGTCTTCGCCTTCCTCGCCTAATTATTCTCCATCATCTCACAATTA
TTCACCTTCATCTCCCCGGTATTCGCCAGGATCATCAAAATATTCCCCGACATCGCCTAC
TTTTACTCCTACTTCTCCCAATTATTCTCCGAGCTCTCCTGCGTATTCTTCCACTGGTGG
ACCATCTACCTATTCTCCAACTTCACCAACATATTCATCTACTTCACCCAATTATGATGA
TGGTGACGACTGAATTGAAAATGTTTTTTTTTACTATAATGTACTATAATTTCTACTATA
CCTCCATAATATACTAAATTTAAAGTTTTATTGTGGTGATAATATTATGTCTTATAATTT
TTTTTTATGACTATGTGTAGAAAAATATTTCTCATACGCTCAACAGCATTGGAATAGTGT
GAGATAATAGAAGATACATGAAATAAAAATGTATCTGTTACTAATTTTCACTTTGTATAG
AATAGTTATAAGTTATTTAGCTTAAGAAATACAAAATATAAATGGTATATTTAAGATAGT
GCTGTATTTTCTTTAAACTAGATAAAAATGAAAATATTCCATTGTTTAAATAATCTTTTA
CGGGTTTTCATTGTTTCAAATGTAATTCCAATGTGATTGCATTGATCAAGACTGGTAGAT
AAATAGTTATCTGCGGAAGAAAATCGTAAAAGTTCAAAACAATTTTGAAATCTGTGGTTA
ATTTACTGTTTCAATTGATTAAAATTAAGTAAGGAGGATTGAAATGGATATTCAATAAAA
TGTGCGTGTACCTTAGTATTAAGAACAAAAACAAAAATATAAAAAAAAGGATTGTGTGGT
TTATGAAACCACAGTAAAAGTGAAACTTTTTTTCACATTATAGACATTTAACTAAAAGTT
TTTGGAATAATATTCCATTAAGGGTATAAAAATCGCTTTATCAATCTTAATTTTATACTT
GGAAAATTGGAATGATAATGGGAAATGATAAAAGTAGACTAAGTCTCCAACTAATATTTT
CATTGAACTCTGTGTCATGTATACACATATTTAAAAAC
(6638 bp)

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