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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN31365_c2_g3_i2
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_DNA-directed_RNA_polymerase_II_subunit_RPB1_[Bombyx_mori]
Ontology
GO:0001055 F RNA polymerase II activity
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005665 C RNA polymerase II, core complex
GO:0005700 C polytene chromosome
GO:0005703 C polytene chromosome puff
GO:0006351 P transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0046872 F metal ion binding
Transcript
Level		FPKM:0.21 TPM:0.12
ORF EntryO_BomoIG12837_complete:A_BomoIG_DN31365_c2_g3_i2
Sequence
(Nucleotide)
TGGAAGAGTGGGCTAGCAGTGGAAACATCTGTTTTGTGAGGAAGTATGTTAGATAGTGAA
CCAACTATTAGAAGGATTTTTACATATCTGCTTTGAACATAACTGATTGTGGAAATAAAA
AACTTAGTTTACATCCATCTTGAGAATTTAGCCCCAAGTTTCAAGGAAGGCAGGGGCATT
CATAATGTCATTTCTAAGAGCACCTGTAACAACCAGGTTAAATACTCAAAGTTAATCGCA
CTCTATTTATTGACTGTTCTAATTTTATAAACCATTTACAGATGAAGATTCATTTATTTT
GGGTATGGATCCAAATTTTGCAAGACCAGATTGGATGATTGTGACGGTTTTGCCTGTCCC
TCCATTGTGTGTTCGTCCAGCTGTTGTTATGTTTGGCTCTGCCAAAAATCAAGATGACTT
AACCCACAAGCTAGCTGATATAATAAAAGCTAACAATGACTTGGAAAAAAATGAGCAGTC
TGGAGCTGCTGCTCATGTCCTTGCAGAGAATATAAGAATGTTACAATTTCATGTTGCTAC
TTTTGTTGACAATGACATGCCTGGTATGCCAAAAGCTATGCAGAAATCTGGGAAGCCCTT
AAAGGCTCTCAAAGCCAGATTGAAAGGAAAAGAAGGAAGAATTCGAGGAAATCTAATGGG
GAAACGTGTTGACTTCTCAGCTAGGACAGTAATCACACCTGATCCAAATTTACGTATAGA
TCAAGTTGGGGTTCCCAGATCAATTGCTCAAAATATGACATTCCCAGAGTTGGTGACTCC
ATTTAATCTTGATAGAATGCAAGAACTTGTCCGAAGAGGAAATGCACAATACCCTGGGGC
AAAGTACATTGTAAGAGAAAACGGAGAAAGAATTGATTTAAGATTCCATCCTAAATCTTC
AGATTTACATTTACTCTATGGTTACAAAGTAGAAAGACATCTAAGAGATGATGACCTTGT
TATATTTAATCGTCAACCAACTCTTCACAAAATGAGTATGATGGGTCACAGAGTTAAGGT
ACTTCCTTGGTCAACGTTTCGTATGAATTTGAGTTGCACATCACCTTACAATGCTGATTT
TGATGGAGATGAAATGAATTTGCATGTTCCTCAATCAATGGAAACAAGGGCTGAAGTTGA
AAATATTCATATAACACCTAGACAAATTATAACTCCACAGGCTAATAAACCTGTAATGGG
TATTGTGCAGGACACATTGACTGCCGTTAGAAAAATGACTAAGAGAGATGTTTTTTTAAC
AAAAGAACAAGTAATGAATCTTCTTATGTTTTTACCTACATGGGATGGTAAAATTCCTCA
ACCTTGCATTTTGAAACCACAGCCTTTATGGACAGGTAAACAAATATTCACTTTAATAAT
ACCTGGTCCTGTTAATATGATTCGAACTCACTCTACTCATCCTGATGAAGAAGATGATGG
TCCTTACAAGTGGATTTCTCCAGGAGATACCAAAGTTGTTGTAGAACATGGAGAACTACT
AATGGGTATTTTGTGTAAAAAGTCGCTTGGTGCATCTGCTGGCTCTCTGTTGCATATTTG
CATGTTGGAATTAGGCCATGAAACTGCTGGACGATTCTACGGTAACATTCAGACTGTCAT
TAATAACTGGCTTCTGTTGGAAGGTCACTCAATTGGTATTGGTGACACTATTGCTGATCC
ACAGACATATCAAGAAATTCAGCGTGCAATCGTAAAAGCTAAAGATGACGTAATAGAAGT
CATTCAGAAAGCCCACAATATGGAATTGGAACCCACACCTGGTAATACACTAAGGCAGAC
CTTTGAAAATCAAGTGAACCGTATCCTCAATGATGCTCGTGATAAAACAGGTGGATCTGC
TAAGAAATCATTAACAGAATACAATAATCTCAAAGCTATGGTAGTTGCTGGCTCGAAAGG
TTCAAACATTAATATTTCACAAGTCATTGCTTGTGTAGGCCAACAGAATGTTGAAGGAAA
ACGAATCCCATTTGGATTTAGAAAACGCACCTTACCCCACTTTATTAAAGATGATTATGG
TCCTGAATCCAGAGGTTTTGTTGAAAACTCTTATCTAGCTGGTCTGACTCCTTCAGAATT
CTATTTTCACGCCATGGGTGGACGTGAAGGTTTAATTGATACTGCTGTAAAAACTGCTGA
AACTGGATACATTCAACGGCGTCTCATTAAAGCCATGGAGTCTGTAATGGTCCACTATGA
TGGTACAGTTAGAAACTCTGTTGGACAACTTATTCAATTGAGGTATGGTGAGGACGGTCT
CGCAGGAGAGACAGTAGAATTCCAGAACCTGCCGACTGTTAAATTGTCAAATAAAGCATT
TGAAAAGAAATTCAAATTTGACTCTTCCAATGAGAGATATCTGAAGAGAATTTTCAGTGA
AGACATAGTCAGAGAGCTAACAGAATCTGGAAGTGTCATAGCTGACCTTGAAAGTGAGTG
GGAACAACTTTCTAAAGACAGAGAAACATTACGTCAGATTTTCCCAACGGGAGAATCTAA
GGTTGTATTGCCATGTAATTTCAAGAGAATGATTTGGAATGCTCAGAAAACATTCCACAT
AAACAAGAGAATACCAACAGACTTAAGCCCTATCAAAGTTATAAAAGGTGTATCAGACCT
TCTAAAGAAGTGTGTCATTGTAGCTGGTGATGATCGTTTGTCTAAGCAAGCCAATGAGAA
TGCTACATTACTTTTCCAATGCTTAGTGAGATCAACACTTTGTACAAAATTTGTATCTGA
AGAACATAGATTATCTAGTGTAGCATTTGAATGGCTTATCGGGGAAATAGAGGCAAGATT
CCAGCAAGCACAAGTAAATCCAGGTGAAATGGTAGGCGCTTTAGCTGCTCAATCACTTGG
TGAGCCAGCTACTCAGATGACATTGAATACCTTCCATTTTGCTGGTGTATCATCCAAAAA
TGTAACACTTGGTGTGCCTCGTCTGAAGGAAATCATCAACATTTCTAAGAAACCAAAGGC
TCCTTCTCTAACTGTATTTTTGACCGGTGGAGCAGCCAGAGATGCCGAAAAAGCCAAAAA
CGTTCTCTGTAGATTAGAACATACAACTTTACGTAAAGTTACTGCTAACACGGCTATTTA
TTATGACCCTGATCCTCAGAATACTGTTATTGCAGAGGACCAAGAATTTGTCAATGTTTA
CTACGAAATGCCTGACTTTGATCCTGCGAAAATTTCGCCTTGGTTATTGCGTATTGAACT
GGACCGTAAGAGAATGACCGACAAGAAATTAACAATGGAACAGATTGCTGAGAAAATTAA
TGCTGGTTTTGGTGATGATCTCAATTGTATCTTCAATGATGACAATGCTGAAAAGTTAGT
TTTGCGAATTAGAATCATGAATAATGAAGAAAGTAAATTCCAAGATCATGATGAAGAGAC
AGTAGACAAAATGGAAGATGACATGTTCTTAAGATGTATTGAAGCAAACATGCTGTCTGA
TATGACTTTGCAAGGCATTGAGGCTATTGCAAAAGTGTATATGCATTTACCACAGACAGA
AGCTAAGAAACGTATAACTATAACTGAACAGGGAGAGTTCAAAGCTATAGCAGAATGGTT
ATTGGAAACAGACGGCACATCTCTTATGAAAGTGCTCTCAGAGCGTGATGTGGATCCAAT
CAGAACTTTTAGTAACGACATTTGTGAGATATTCCAAGTGCTTGGAATTGAAGCTGTACG
AAAATCCGTCGAAAAAGAAATGAATGCGGTTTTGCAGTTCTACGGTCTATACGTGAATTA
TCGACACTTGGCATTGCTTTGTGACGTCATGACAGCAAAAGGTTATCTTATGGCCATCAC
ACGTCACGGCATTAACCGACAGGACACTGGTGCTCTTATGAGATGTTCATTTGAGGAAAC
CGTCGATGTTTTATTGGACGCTGCCAGTCATGCTGAAGTGGATCCTATGAGAGGAGTATC
AGAAAATATTATAATGGGACAGTTGCCGAGAATGGGTACTGGTTGCTTCGATTTATTACT
TGATGGCGAGAAGTGCAAGGAAGCAATGGGCGGTCTTGGAGGCGCAGAAGTGGGAATGTA
TTTCGGTGTCGGAACGCCATCTATGTCACCACTTATGACTCCCTGGTCTACACAGAATAC
ACCAGGATATGGAAGCAGCGTGTGGTCTCCATGTCAAGTTGGCAGCAGTATGACTCCTGG
AGGACCATCATTCTCGCCATCTAACGCATCTGACGCATCAGGACTCTCACCGGCATACAG
TAATGCTTGGTCACCACAACCTGGTTCACCAGGATCTCCCGGACCTCCGCTTTCACCTTA
CTCGTCGCCCGCAGGAGCGTCACCATCTTACTCCCCATCGAATCCTGTTTACGCTCCCGC
GTCCCCGAGTATTACTCCAACATCACCACATTATTCACCTGCCAGTCCTTCTTACTCTCC
AACTTCACCCAATTATTCCCCGACTTCACCAATATACTCGCCAACATCACCCAGCTACTC
GCCAACATCGCCTGGTTATTCGCCCACATCCCCATTATACTCCCCAGCTTCTCCTAGATA
CTCTCCGTCATCTCCCAACTATTCACCAGCAAGTCCGGCTTATTCAACAACTTCTAATTT
CCCGACAACTTCACCTAACTATTCTCCATCAAGTCCTTCGTATTCTCCCACGAGTCTATC
GTATTCTCCAACGAGCCCAGGTTATTCCACATCCCCTGGCTATTCGCCCTCGTCACCTAG
ATATTCACCAAATAGTCCTGTCTACAGTCCTACTTCATCAAATTATTCGCCTTCGTCTCC
AAATTACACTTCTGGATCTGTTTATTCACCTACGAGTCCTACATATTCACCTACTTCTCG
CTCATATTCTCCATCATCACCGAGCTATTCGCAGTCTTCTCCAAATTATTCACCCTCGTC
ACCGAATTATTCTCCTACTTCGCCCTCTGTGGCTGGAGGTAGTCCTACATATTCACCAAC
AAGTCAGCAATATTCTCCAACCAGTCCACAGTATTCTCCGACTAGTCCAGGCTATTCTTC
TACATCACAACATCCTAGTAGCACTAGGTATTCGCCGTCTTCGCCTTCCTCGCCTAATTA
TTCTCCATCATCTCACAATTATTCACCTTCATCTCCCCGGTATTCGCCAGGATCATCAAA
ATATTCCCCGACATCGCCTACTTTTACTCCTACTTCTCCCAATTATTCTCCGAGCTCTCC
TGCGTATTCTTCCACTGGTGGACCATCTACCTATTCTCCAACTTCACCAACATATTCATC
TACTTCACCCAATTATGATGATGGTGACGACTGAATTGAAAATGTTTTTTTTTACTATAA
TGTACTATAATTTCTACTATACCTCCATAATATACTAAATTTAAAGTTTTATTGTGGTGA
TAATATTATGTCTTATAATTTTTTTTTATGACTATGTGTAGAAAAATATTTCTCATACGC
TCAACAGCATTGGAATAGTGTGAGATAATAGAAGATACATGAAATAAAAATGTATCTGTT
ACTAATTTTCACTTTGTATAGAATAGTTATAAGTTATTTAGCTTAAGAAATACAAAATAT
AAATGGTATATTTAAGATAGTGCTGTATTTTCTTTAAACTAGATAAAAATGAAAATATTC
CATTGTTTAAATAATCTTTTACGGGTTTTCATTGTTTCAAATGTAATTCCAATGTGATTG
CATTGATCAAGACTGGTAGATAAATAGTTATCTGCGGAAGAAAATCGTAAAAGTTCAAAA
CAATTTTGAAATCTGTGGTTAATTTACTGTTTCAATTGATTAAAATTAAGTAAGGAGGAT
TGAAATGGATATTCAATAAAATGTGCGTGTACCTTAGTATTAAGAACAAAAACAAAAATA
TAAAAAAAAGGATTGTGTGGTTTATGAAACCACAGTAAAAGTGAAACTTTTTTTCACATT
ATAGACATTTAACTAAAAGTTTTTGGAATAATATTCCATTAAGGGTATAAAAATCGCTTT
ATCAATCTTAATTTTATACTTGGAAAATTGGAATGATAATGGGAAATGATAAAAGTAGAC
TAAGTCTCCAACTAATATTTTCATTGAACTCTGTGTCATGTATACACATATTTAAAAAC
(6119 bp)

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