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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN31352_c0_g1_i7
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
Ontology
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004525 F ribonuclease III activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0015630 C microtubule cytoskeleton
GO:0020037 F heme binding
GO:0031053 P primary miRNA processing
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0070877 C microprocessor complex
GO:0070878 F primary miRNA binding
GO:0072091 P regulation of stem cell proliferation
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:1.65 TPM:0.92
ORF EntryO_BomoIG12179_complete:A_BomoIG_DN31352_c0_g1_i7
Sequence
(Nucleotide)
CTCGGACCCCACTAGCGCTAATCATAATTAATGAGATTATTTTTGATTTGAATTCATTAT
CTTCTATATATTATATAAAAATGGAGTTTGTATATTTGTCCTATGTGCGTTCCCAAACCA
TCGGTCCGATTGTGACCAAGCTTGGTACCCTCGTCGGCACCGTGGCCGCGCAATGCTGGC
TTCAAGAAATCGATGGTTTTCACACGACCACGGCGTGCCCGGGTGCCGCTGGTCGTGAAT
AAAGTAATGTTGGATACTAATTTTTTTGTGGTCATTGTCCGATTTTCCTCAAGACATCAA
CGCCCCGCTCTTGTGAAACTGTCGTAGGGGTGGCTACTCTTGCGCTCCTTCATCCTGACC
CGGGACAGAAGGGCCGCGGTCAGCACCACGACGCGCGCGCCACCCGGACACGCCGTGTTG
AGGTGGTAATATGTTGCCAACGTATTGCAATATTATGTTCTAACGTATTGTACAATATTA
TCTAGACTTAAAAATAGGTGGCTCGACTTGAACAATGAAAATAAAACTAAGTATATAGAG
CCCTAAGCAGATGATTTAACTAACATTATTTAAAAAGTTGTGTCATGTCGATAGAGATGT
AAGTAACGCCATCTGTGATGCCGAAGAGACTAGTACTACAGTACTACCGTTGAAGTTCTG
GAAACCGTAGAACCGTCGTGTCGGGAGCGCGGGGGCACACGCCCAGCTGTCGGAACTCAC
TTCTACTCGAAGAGATGCAGCGGACGAAAGTGGACCATGAGAGTCGTAATAATCAAATTC
GAGTCTTAATTTGTATTTCGGTGAGAGTTTTTACTCATCCCGAGCCCCAGCGCAACACGC
CTGCACCGAGGAGGCTGGCAGGGCGCGTGCCGCAGCTCGACCGCCGTGCACAAGTAATCG
ACACAATTAATTTAACGACAGCTTCATTACGGAGACACGGGCCCGCGCGCTGCGGACACC
CAGAATACGTTTGTGCCGGTCCTTGGGCCTTCTCACCCCCTCGCATGTGGGGGCGCGCAC
CGGTGGCGGCATTACCAGGGTTTGTTTTAACAATAAATTAAAAAAGTTTATTATTTACAC
AAATAATTGCTGTTGTTTTGGGACTTTTTTTTGGGGTTGAATTATGTTTTCATTGAATTA
ATCAAAATCAGAAGAGGAAATTGAATAATTATATAGCCAGCAGTCGTCTGCGACCGGAGG
TGGCGCCCCCCGGCGGCAGCCCCCGCGCGCACAGTATTGTTTCTACTTATTACTTATGTA
GAGGGTGCCAGGGCACGTGAAGTCGCTCAGAGCTCGACGTTGTTGAGGTTGGAGGCGGAG
TGCGAGGGCAGGTCGTCGGCCAGCAGCAGCGTGCCGATGGGCACCACGGCCGCGTCGCGC
TCCCGCAGCTTCCGCATCTCGTTCCGCAGCTTCTCCAGCACCGCGTAGTTGGGCTCGTTG
TGGCGCGCCTTGTCCTGCAGGAGCGTGATCTGCTGCTCCTCTAGCTTCTTCTCCTTGCAG
CTCTTCACGGACCGCGAACCATACAGCCGCAGCAGTGAGCCCCACGAGCGCACGTGGGGG
TGCAGAGCCTGCAGGATGGACTGCGACGCGCGCTGCTTGGCCGTCTTCTTGTTCTTGCAG
ACCACGGTGGCGGTGTGCTTGCCCACCTTCATCGTCAGTTCAATCTTTTGGTTTTCAAAC
TTTTTCATCTCGGTGTGCACGTGCCGGTCGCCGGCGCCGAAGTTCCTGAGCAGGCAGGTG
CGCAGGATGGCGTGCGGCGAGGGCTCGCAGGTGGCGGCGCAGAACTCGGCGATGCGCGGG
TCCTCGATGCCGACGTAGTCGAAGAAGGTGAAGTCGGGGTCGGCGTCGCGGCGGCGGCCG
TCCAGCTCGTCCTTCATCTCGGGGATGAGGATGTGGATGGAGGCGCGCGCGGCCGCCGAC
TTGGCCTGGCGCTTGCTGGAGCCGCGGCCCACGCCGTACTGCATGCCGCCGATGTACACC
GTGGCCTGGTAGGGCGTGGCGGCGTTCTCCAGCTGCTTGAACTCGTAGACGGGCTGCTTC
TGCAGGGCGCGGCCCACGTACTCGTGGAACACGGCGAGGTAGCTGCGCCCGTCCATGTTC
ATGACCCAGTCGCGCTTGGTGGACTTGCCGCCTTCAGCGTCGTGCGCGCCGTGCTGCGCG
GGGATGGCGATGAGCTTGGTGCCCTCGGGCAGCGCCGGGTACTGCAGGGCCTTCCGCGCC
TTGGTGTACTTGCGCTTGTCGGCCCAGCGCTTGAAAAGCATAATATTGACGGTCTTAAAC
TTGAACAGCTTAGCGCAGTACTCGTTGACCTGCTCGTGAGTCAAGTGCTGGGTCTTCCAG
CTGGTGCTGACGGTCTCCACCCTGGGGGGAGGCATCACGATCCCGCCGGGCAGAACCACC
GGTTTCCTGTTGGCGGGGATGCCATCATCGTTCTCCTGCCTGCTTACACTGCCGCCACTG
CTGGTGGTGTCTCCAGTAGTGCCGCCGGTGGTAGCACTGCTGGTGGCGTCTCCAGTAGTG
TCGCCTGTGGTAGCACTGCTGGTGGTGTCTCCAGTAGTGGCACCAGTGGTAGCGCTGATG
GTGGTGTCCCCAGTGGCAGCGCTGTCGGCGGGGTCCCCAGTAGTGGCACTGGTGGCAGCG
AAGGGGCAGCGAGGAACGGGCGGCTCTGAGGCGGCGTCGCTCTGCACCGTGTTCCAGGTC
CCATTGCGGATCTGTTCTTGGATCTTGTTGTCAATTTCCTTTTGTTTTTCTTCCTCCTCT
AAGTACTTTCTGTACGCAAGACACGGGATGGCGCTGATGGGAATATCGTGCCGCCGGATG
TTCCCTTTCCCGAGGAAGTAGGGCTTGGAGAGCGTGCAGACCCTGGTGGAGCGGTGCATG
TAGACCGGCATGCCGCTGTAGTGTCGGACCATCATCCAATCCAGCGGAAGCACTTCGAAG
TGGTTGGCGCCCTTGTCTTCTAAAACAATTTTCTTTCCCATAACGTATGCCTTCTCCTTA
GGTTTAGGAGCACCCTTAAAGCCCTCCGGAAGATCTTCATCTAACATTTTCTCTATTTCA
TCTTCGGGCACACCTTCTGATTTTCCCTCAGTGGACTCTGTATCCTCGTCATTACTATCT
TCTTCGTTGGACTTCACCTCATCTAGAACTTTGAATTCCCGCAGCTGCTGCAGCTCAGTA
GGGGTCACATAATCAGTATATTTATCAGTACTTATCTTAAAGTCTTTGTTATTATCTACA
ATGGACACATCTTGAGTGAAATCAACATCTTCTACCGAATTGTCCACCTTTGGCTTCTTC
GCTGGTGGCATATGCTGATCTTCCTCATTCATTTTATTCTGTTTAAAAACGTGCGTTCAT
TGAAAATGTTTTTAATGAAATAGGAACACATTAATTTATCTTCAACATACCATGTTAGGC
ATAATCCATTAAATTACATAAACTAAGATACACGTTGATAACA
(3463 bp)

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