SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN31352_c0_g1_i36
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
Ontology
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004525 F ribonuclease III activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0015630 C microtubule cytoskeleton
GO:0020037 F heme binding
GO:0031047 P gene silencing by RNA
GO:0031053 P primary miRNA processing
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0070877 C microprocessor complex
GO:0070878 F primary miRNA binding
GO:0072091 P regulation of stem cell proliferation
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:0.74 TPM:0.41
ORF EntryO_BomoIG12258_3prime_partial:A_BomoIG_DN31352_c0_g1_i36
Sequence
(Nucleotide)
CTGCGCTGATGGGAATATCGTGCCGCCGGATGTTCCCTTTCCCGAGGAAGTAGGGCTTGG
AGAGCGTGCAGACCCTGGTGGAGCGGTGCATGTAGACCGGCATGCCGCTGTAGTGTCGGA
CCATCATCCAATCCAGCGGAAGCACTTCGAAGTGGTTGGCGCCCTTGTCTTCTAAAACAA
TTTTCTTTCCCATAACGTATGCCTTCTCCTTAGGTTTAGGAGCACCCTTAAAGCCCTCCG
GAAGATCTTCATCTAACATTTTCTCTATTTCATCTTCGGGCACACCTTCTGATTTTCCCT
CAGTGGACTCTGTATCCTCGTCATTACTATCTTCTTCGTTGGACTTCACCTCATCTAGAA
CTTTGAATTCCCGCAGCTGCTGCAGCTCAGTAGGGGTCACATAATCAGTATATTTATCAG
TACTTATCTTAAAGTCTTTGTTATTATCTACAATGGACACATCTTGAGTGAAATCAACAT
CTTCTACCGAATTGTCCACCTTTGGCTTCTTCGCTGGTGGCATATGCTGATCTTCCTCAT
TCATTTTATTCTGTTTAAAAACGTGCGTTCATTGAAAATGTTTTTAATGAAATAGGAACA
CAAGATCGGAAGAGCACA
(618 bp)

- SilkBase 1999-2023 -