SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN31349_c1_g1_i4
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		PREDICTED:_nephrin-like_[Amyelois_transitella]
Ontology
GO:0000165 P MAPK cascade
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007254 P JNK cascade
GO:0007275 P multicellular organism development
GO:0007517 P muscle organ development
GO:0007519 P skeletal muscle tissue development
GO:0007520 P myoblast fusion
GO:0007588 P excretion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0017022 F myosin binding
GO:0030838 P positive regulation of actin filament polymerization
GO:0032836 P glomerular basement membrane development
GO:0035418 P protein localization to synapse
GO:0036057 C slit diaphragm
GO:0042995 C cell projection
GO:0044062 P regulation of excretion
GO:0070062 C extracellular exosome
GO:0072015 P glomerular visceral epithelial cell development
Transcript
Level		FPKM:0.46 TPM:0.26
ORF EntryO_BomoIG11114_complete:A_BomoIG_DN31349_c1_g1_i4
Sequence
(Nucleotide)
AGCAGAAATAGGCAGAGTGGTGGTACCTACCTACCCGTGCGGACTCACAAGAGGTCCTAC
CACCAGTAAGATAGTTAAATTAATGTACATAGAATATATTATTGTATGGGTCTGCAGATC
GGAATAGTTGTAATTACACTTTAGAGCTAAGGAAATAGCTCCATATACTTTATCTAAACC
ATATCGAATACTCTGCATCAATCGAGCGACAATGTCTCAAATCGATAATTTGAAGTCAAA
TCAAGACACAATATTGAATACCATTCCCCCAGAAAGTTCCTTAGGCTTTGAACTATTATA
ATTCGATCTAGGTATTTTCTTTAATTGTTTTTTATAAATTTTTCATGTTCTGTACAAAAA
AAACTATTATGTATGTTCTCGATATGACAATAACGCTAAGAAAGGGTCGAAAAAAAGAGA
TATCGAAAAAATAATTAAAAAAGCACTTTTATAATATATACACATAATTATCTAAAATTA
TCTACAGCTTAGAGCCTTCATTGTACCTCTTAAAGAGTAATTAATTGTTATATTACGACA
AATTATTCTAAATTATTTAATTAACATTTCCCCATCAGTCGTTTATTTGAAGATACAAAT
CATTTTATCCGTAAAACTAAATTGATTTTTTTTTCCATTAAGTTATAATACACTCTTGAC
CAGAAAATATAAATACTAATATTATTTAACGATTAATTGTAAACAGAATCGGCTTACTAC
TAATATCTGTAAAAACAACCTTTAATCAAAACTAATCATTATTACACATATTTTAAAATC
GAAGATTCCTTAACTTTCCTCGTAATTATATGTACATCAAATTGAAATTTTAAACACAGC
TTTCTTGATGCGCCGCGAGTAGAGGCGTTCTCGTTGTCACGACTTCTCTGTGAGATCTCA
AAACTCCGTTCGCTCCGTTTCGACTTGATTCACTCTGCGTGTCAGCGTATTGAGCGTGCG
ACGAAGCCGGCGTGGTCGGTGATAGCGTGCGAGACAAACTGTGGGCGCTGTTCGAGTTCT
TTGGGTCTGATGACGTCACCGCCGAATACATAGGCGGATCGGGCGGACATCCTGCCAGTC
CTTTGCTTAGTGGAATGATGTCTGGATTTCTGTCGTCTTGCCCGTGAGGAGAGTTCCTCT
TTGGCGGTAATACCTTTTGGTTCTTTAATGAAGGTATGGTGACTTCGTAGTCTCTTGCTC
TATTTCTCAATTTGAAAACGGTCATTGCGAGACAGACAATCACACCGATCACCGTGATGA
AGCACAAAGCACCGCCGACAGCCCAGTTCACTTCCCATGCCGCTTGCGCTTCCGTCCTTG
GAGCTAATCTCGGTGCAGTTTCAACAGTGAATGAGACGTGCTCGGACCTCCCTCTAGAAT
TCGCGGCATATACAACCAAACGCAAAAGTCTTGCTGCTCCCAATCTTCTTAGGTTCCATA
AGGCAGCACCATTACTCACGTTCACCAACAGACCCTCGTTGGTCCAGACTTCTAATACGT
AAACACAACGTAGACCTCCTTCGTATCCAGCAATACAGGCGAGGTCCAGAGAGTCGTCGG
TGAGGTTGTAAACAGTGCAGTTAGTTGGCTGATCGGGACGCGTCGCCGGTAATAAAGTGT
AGAGGCACGGCATCGGCTGCTGTCCAGCCAAGTTCGTCGCGCGGCACGACAACGTGCCAT
AGTCGACGTCCGACACCGGCATGTAAGTTAATACTGAACGACCCTCCTTTACTTCCACCG
TGAAACGTTCAGCATCAACCCTGATGGATCCAGCAGAACTGTTCAATGTCCATTCGAAAG
TGTTCGGTGGAGGATATGCGTCCACCTCGCAGATAACCTTCGTCGGTTCTTGGAGAGCAG
CTCCAATCATTTTCATTTCTCTCTTCCGACAGAGCGGTTTGTAAACTATTTGTAAGTGCA
GTGGAGGAGATTTTCCGTCACCCTCCACGTTAGATGCTGTGCAAGTGTAGTTTCCCGCTT
GGTGTCTTGATACGTTTCGGACCGCCAGGTTCGTGTTCCCGGTCAATATTACACCATTCG
ATGGATTGTGTTGTAGAAGAACCTCGTTATGCTCCCATATGACTTTGTACGCTGGTGGAT
TTGCGTCAACGTCGCACCCGAAGTAAACATCGTCGCCTTCTTCAATATCGTTTGGATTCA
TCTTCGAGCCAAGCTCCATTCTTGTAATGGGAACGTAGTAAATATTCAAAGGTAGCTTGC
TTTCAATGGTGGAGTGATTGAAGCGAACATGTTCAGCTCTGCATGTGAGTACCTTCCCGT
TGTGCTCTTTCATGGGGACCCATTCGAGCAAAGACTGGCTTTCGTTTGTATCCTTTTTCT
GTTTGCCGATAGAGTGCAGCTGTTTTCCATCAAGCCACCAAGTGATATTAGCAGGGGGTC
GTGCCCCTGTAGACCGGCACCAAAGCTCAGTCTTTCTGCCCACGGAGAGCGGCTGTTCCT
TTGATAAAATTTCGACTGATAGCGGCCTCAAATACAGATCCACTCGAACGCTAGTCTTCT
GCGGTGTAGACAACAGTGTGTTATCAGCCGTGCAAGTGTAAACAGCAGACAAATGCAGCC
TAGTAGCGTTCTTCACAACTAGTACTAGAGTCCTGGTCATCCCCGAAGGTTGAAGGTCAC
TGGCTCCCAAAGTCGTTAAAACTGTGTCTCCGTGCAGCCATTGTACTCTTGGAGTGGGTG
TACCCCCGTTTACTGAACAAATAAGTTTGAAGTCCCCACCCTCGTTGTAAGGGCCCGCCG
CACCGGATATTTCCTTGCCGAATTCGTCAAAGATAACCGGCTTATTCGGGAGCTCTATTA
CATCAAGTGCAATCCTGTAGTTCCTGGTGGGTGAGATTTGGAAATCGACCCTGCATCTGT
AGACGGCTCTGTCTCGGGCCTGTACAGCATCCACGTGGAGACCAGAAGACGGCGTGCTGT
ACCAGCGTGCTCGGTTTGCGAAGGGCTCGTCAGTCCAGTGAGCAGACGGCCCGAGCACTC
GAGTGTCATAGCTGTAAACTGGATTGTCATCTCGGTACCAAACGACCAGCAGCATGCTAT
CGTTGCGCTGTGGCGGGCGACTGTCGCAGGGTAAATTAGCCTCCCCGCCTACGACCGCCG
CTACTCTTGTCACTGTGCCCGTTACCGACGACATCGGACTACCAGTGATAAAAGTGTTTT
GCGTGGCTGAAGGCGAATTACTGAGAGCCAGTAGAACGAAAGCGAGCAGAGTCCTTTGAG
CGCCCACTGCTATATGCATTTCGGTATTTTTCTCTAACTAACATTAAAAACTAATATATA
TTCACATATGGACTTTCACACTTGTCACTAGCTATTAATTCGCCTATTCGCGTTTCCAGT
CGGATCGTAAATCCACGTGAACATGCCTCGTTATTCCACAACATCGTACACTAGCACAAG
CAAAAAAAAAAAAAAACACAAACTATCAATTTAGAAAACCGGTTCAAGACACAAAAACGT
GTAAACAGTCGGAAACATTCATGAAAACATTCGCGAACTCTCAGCTCTCTTAGTTGATAC
CCGAAAGTTTTCAAAGTCCCCTAGTTACATACTTCCTGATTTTATATAGGACGTAGTTGT
GCTTCCGGAGCTAGGCTTAACAACGTGTGCGTCGAACGAACGCAGCT
(3647 bp)

- SilkBase 1999-2023 -