SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN31349_c1_g1_i1
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		hemicentin-1_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007267 P cell-cell signaling
GO:0007399 P nervous system development
GO:0007416 P synapse assembly
GO:0008039 P synaptic target recognition
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030424 C axon
GO:0032403 F protein-containing complex binding
GO:0042995 C cell projection
GO:0045202 C synapse
GO:0048668 P collateral sprouting
GO:0048755 P branching morphogenesis of a nerve
GO:0050808 P synapse organization
GO:0050839 F cell adhesion molecule binding
GO:0051017 P actin filament bundle assembly
Transcript
Level		FPKM:0.27 TPM:0.15
ORF EntryO_BomoIG11099_complete:A_BomoIG_DN31349_c1_g1_i1
Sequence
(Nucleotide)
AGCAGAAATAGGCAGAGTGGTGGTACCTACCTACCCGTGCGGACTCACAAGAGGTCCTAC
CACCAGTAAGATAGTTAAATTAATGTACATAGAATATATTATTGTATGGGTCTGCAGATC
GGAATAGTTGTAATTACACTTTAGAGCTAAGGAAATAGCTCCATATACTTTATCTAAACC
ATATCGAATACTCTGCATCAATCGAGCGACAATGTCTCAAATCGATAATTTGAAGTCAAA
TCAAGACACAATATTGAATACCATTCCCCCAGAAAGTTCCTTAGGCTTTGAACTATTATA
ATTCGATCTAGGTATTTTCTTTAATTGTTTTTTATAAATTTTTCATGTTCTGTACAAAAA
AAACTATTATGTATGTTCTCGATATGACAATAACGCTAAGAAAGGGTCGAAAAAAAGAGA
TATCGAAAAAATAATTAAAAAAGCACTTTTATAATATATACACATAATTATCTAAAATTA
TCTACAGCTTAGAGCCTTCATTGTACCTCTTAAAGAGTAATTAATTGTTATATTACGACA
AATTATTCTAAATTATTTAATTAACATTTCCCCATCAGTCGTTTATTTGAAGATACAAAT
CATTTTATCCGTAAAACTAAATTGATTTTTTTTTCCATTAAGTTATAATACACTCTTGAC
CAGAAAATATAAATACTAATATTATTTAACGATTAATTGTAAACAGAATCGGCTTACTAC
TAATATCTGTAAAAACAACCTTTAATCAAAACTAATCATTATTACACATATTTTAAAATC
GAAGATTCCTTAACTTTCCTCGTAATTATATGTACATCAAATTGAAATTTTAAACACAGC
TTTCTTGATGCGCCGCGAGTAGAGGCGTTCTCGTTGTCACGACTTCTCTGTGAGATCTCA
AAACTCCGTTCGCTCCGTTTCGACTTGATTCACTCTGCGTGTCAGCGTATTGAGCGTGCG
ACGAAGCCGGCGTGGTCGGTGATAGCGTGCGAGACAAACTGTGGGCGCTGTTCGAGTTCT
TTGGGTCTGATGACGTCACCGCCGAATACATAGGCGGATCGGGCGGACATCCTGCCAGTC
CTTTGCTTAGTGGAATGATGTCTGGATTTCTGTCGTCTTGCCCGTGAGGAGAGTTCCTCT
TTGGCGGTAATACCTTTTGGTTCTTTAATGAAGGTATGGTGACTTCGTAGTCTCTTGCTC
TATTTCTCAATTTGAAAACGGTCATTGCGAGACAGACAATCACACCGATCACCGTGATGA
AGCACAAAGCACCGCCGACAGCCCAGTTCACTTCCCATGCCGCTTGCGCTTCCGTCCTTG
GAGCTAATCTCGGTGCAGTTTCAACAGTGAATGAGACGTGCTCGGACCTCCCTCTAGAAT
TCGCGGCATATACAACCAAACGCAAAAGTCTTGCTGCTCCCAATCTTCTTAGGTTCCATA
AGGCAGCACCATTACTCACGTTCACCAACAGACCCTCGTTGGTCCAGACTTCTAATACGT
AAACACAACGTAGACCTCCTTCGTATCCAGCAATACAGGCGAGGTCCAGAGAGTCGTCGG
TGAGGTTGTAAACAGTGCAGTTAGTTGGCTGATCGGGACGCGTCGCCGGTAATAAAGTGT
AGAGGCACGGCATCGGCTGCTGTCCAGCCAAGTTCGTCGCGCGGCACGACAACGTGCCAT
AGTCGACGTCCGACACCGGCATGTAAGTTAATACTGAACGACCCTCCTTTACTTCCACCG
TGAAACGTTCAGCATCAACCCTGATGGATCCAGCAGAACTGTTCAATGTCCATTCGAAAG
TGTTCGGTGGAGGATATGCGTCCACCTCGCAGATAACCTTCGTCGGTTCTTGGAGAGCAG
CTCCAATCATTTTCATTTCTCTCTTCCGACAGAGCGGTTTGTAAACTATTTGTAAGTGCA
GTGGAGGAGATTTTCCGTCACCCTCCACGTTAGATGCTGTGCAAGTGTAGTTTCCCGCTT
GGTGTCTTGATACGTTTCGGACCGCCAGGTTCGTGTTCCCGGTCAATATTACACCATTCG
ATGGATTGTGTTGTAGAAGAACCTCCTGTTAAAAATACGATTGATAATGAATACATTTTA
ACGGCCGTCTGGTGTAGTGGTAAGTGACATGGTCACTACACATGGGAGTC
(2150 bp)

- SilkBase 1999-2023 -