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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN31347_c4_g2_i7
Scaffold_idBomo_Chr3
NCBI non-redundant
(nr)		long-chain-fatty-acid--CoA_ligase_5_isoform_X2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0001676 P long-chain fatty acid metabolic process
GO:0003824 F catalytic activity
GO:0004467 F long-chain fatty acid-CoA ligase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005743 C mitochondrial inner membrane
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016874 F ligase activity
GO:2001236 P regulation of extrinsic apoptotic signaling pathway
Transcript
Level		FPKM:0.34 TPM:0.19
ORF EntryO_BomoIG10999_complete:A_BomoIG_DN31347_c4_g2_i7
Sequence
(Nucleotide)
GCCGCCTTTTCATTTTGCATCATCTTGATATAAATATATGTAAGTATTCACAATTTTTTT
TTGTTATTATGAATGTTTTATTATAAATGAAGCCAGATACTTTTAGAAATAGAACCGCAT
TCTTCCATTTAGAACCTCTGAAAATATAGGTCCCATTTCGAGTTACTAGTATCCCATTCC
CAAATGTGAGTCGGATGCAACGTCTAATATAAAATTACAAAGTATATACCTGTTCAAAAG
TTTTCAGGCCAGCGTTCCTGCCCCACTGAAGCATGTCCTCCATGATGACCTTCTTGACTC
GTTCATCCTCGCACAGAGATGAGAAGGTTCCTTTGATACCGTATTCTAAAGCCCAGCATT
TAACGACATCCACGTCCGGTACAACTATAGCGACCACGCAGGACTTCAATGATTCACCGT
GAACAAAGACTTGCTCAACGTACTGACTTCTAATGTAAATGTTTTCAATTTTCTCAGGAA
CTATATATTCGCCTTGTGACAATTTGAAAATGTGTTTTCTTCTGTCGATTATTTTCAGGG
TACCGTTAGGTAACCACTTGCCGACATCGCCGGTGTGATGCCATCCGTCTTGGTCGATGA
CCTCTCTGGTTTTCTCCGCGTCCTTGAAGTATCCTTTGAAGACGTTAGCTCCCTGCACGC
AAACCTCACCCTGGCCCTGCGCCGCATAGTACTCCATTTCGGGCACGTCCACTAGCTTCA
CTTTACAACAAGCGACGGGAGGGCCGACGTGTTCAGGAACATGATCTCCCTGAACTGTTA
GCGTCACCGGCGCAGTGCACTCTGTCTGACCGTAGCCTTCCACGATCAAACAACCGAGGG
CGCATCTCGCGAAAGTCAGTACGTTTCCTGCTAAAGGCGCTGATCCGACGACCATTATCC
GAAGTCGTCCTCCCATACCTTCTCGAACCTTGCGGAAAACTAACTTGTCCCATATCGAGT
CAGCACGAACTATTCCTCTCTTCAATTCCGATTCTTTTGCGGATAGCGCCATGTTGAAAA
GTAATTTCTTGATTTTCGAGTTGGCGATCTCAGTCTGGGCTTTGTCGTACAGTCTGTTCA
GGAGACGTGGAACAGCCGGCATCATGGTCGGCTTAAGAGCGGTGAGGTCATCGCCCAGCC
TCCTTATATCGCCACTGTAGAAACCAACGGCTCCTCCCACCATGTAGAGAGCATTCTCGC
AGCATCGCTCCAGCATGTGAGCTAAAGGCAGGAAGGAGATCATGATGTCGTTCTTGGTGG
GTCGATGCTCGCCGAGTTGCATCGTAACGCTGCACATCGAAGCTACAACGTTCTCGTGAG
TCAGCATAACGCCTTTAGGCATCCCAGTCGTTCCGGACGTATAACATATTGTACAAAGGT
TTTCCGGTTTCGGTGGGACAAAAGGATGGTCCTTTTGAGCTCCCTGTATTTCGACGTCAG
AGAACTTCAAAATCTCAACACCACGGCTCTTGGCGCGTTGAAATGTAGACGGCGATACTT
CCTTAATTGTAATCAGTTTTCTGAGGCATCGAGGCGACTGATCCAGTAGGAGATTGGCTT
TTTTGTCGTCTTCACAAATTACTACAGCCATTTCAGTTTGGTTAACAATGAAGGCACAAG
CGTTCGCTCCTAGCGTATCATACAACGGAACTATAACCATCGAATAACAATACGCCGCCT
GTTCGGTCATAATCCATTCAGGACAATTCTGCGAATAAATACCGACAAATGTAGTCTGAC
CGGGAATGAGACCTTGACAGAGCAGACCGGAACCAAAATTCTTTGCGCGCAGTAGAGTCT
CATTATATGTCTGCCAAACGTAAGGCTTGTTCGGACCCTCGCGCCAACCCAAACAGTTGC
CATTGTTCGACTCTTTTACGCCTCGTCGGAAAGTGTCGTAAAGTGTGCGTGTATCCTCGT
GAAGATATCGTAGGAAACGTCCGTTCTTCGCGTCTTTGTAGAATTTCGAAACACGAACCA
TCTCAGGTCCAGACTCCAGGAGGCTCTGTTCGTGTAGCGTCACGAGTGGTTTCTCTGGTT
TCGGTCGTGTACTTAGATAGAAGGCCGATGCGGCTGCGACCCCGGTCAAAGCCAGAGCAC
CAGCTGAGCCCCCCACCATCCACAGATACTGATCGATCTCGCTTAGTTTAGACATCATGT
TCGTCGATACTCCACGCCAAAACAAACCGATTTAAAACCTAAATATACGTAACTGTTTCT
CCAATTTTAATATCACAATTTAACTTAGCGTTAAGACTAAAAATTACTTTTCAAACGTTT
AAAATTTAAACTAAAAAATTACTTCTAAATATTTACAAATTTGTACTAAGGTGTTATTAT
TAGACTAGCATTATTTAAATATTTGCTTAAGAAACATACGGCATCTTGCAGTTATTATAA
AAGTAACTGCGCAGCTTACGAAAGCCGCATTTCTATATCAAGTTCACGTGAAAACGCAAA
GCCGTAATCGTCGGACGCAGTACGCATGCGTG
(2492 bp)

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