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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN31347_c4_g2_i3
Scaffold_idBomo_Chr3
NCBI non-redundant
(nr)		long-chain-fatty-acid--CoA_ligase_5_isoform_X3_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0001676 P long-chain fatty acid metabolic process
GO:0003824 F catalytic activity
GO:0004467 F long-chain fatty acid-CoA ligase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005743 C mitochondrial inner membrane
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016874 F ligase activity
GO:2001236 P regulation of extrinsic apoptotic signaling pathway
Transcript
Level		FPKM:21.91 TPM:12.20
ORF EntryO_BomoIG10994_complete:A_BomoIG_DN31347_c4_g2_i3
Sequence
(Nucleotide)
ATTCAAAGTATGTACGAGTATTCATTATCAATTACAATATTACAGCCATCCACTAAAGTT
CGTCTCCGTCAAACAGCATGCCTCTACAGTTTAATTAGTGCATTGTGCTCGCTACCGTTA
TTCAAGTTGCTTGTACATGTCCTCTATTTGCGGTTTGAAATAACTTCGTATTTCTGGTCT
CTTCGCCTTCATCGTTGGCGTCAGTAGGCCGTTCTGTACCGAAAACGGATCCGGATGCAA
GTATATATCTTTTACCTGTTCAAAAGTTTTCAGGCCAGCGTTCCTGCCCCACTGAAGCAT
GTCCTCCATGATGACCTTCTTGACTCGTTCATCCTCGCACAGAGATGAGAAGGTTCCTTT
GATACCGTATTCTAAAGCCCAGCATTTAACGACATCCACGTCCGGTACAACTATAGCGAC
CACGCAGGACTTCAATGATTCACCGTGAACAAAGACTTGCTCAACGTACTGACTTCTAAT
GTAAATGTTTTCAATTTTCTCAGGAACTATATATTCGCCTTGTGACAATTTGAAAATGTG
TTTTCTTCTGTCGATTATTTTCAGGGTACCGTTAGGTAACCACTTGCCGACATCGCCGGT
GTGATGCCATCCGTCTTGGTCGATGACCTCTCTGGTTTTCTCCGCGTCCTTGAAGTATCC
TTTGAAGACGTTAGCTCCCTGCACGCAAACCTCACCCTGGCCCTGCGCCGCATAGTACTC
CATTTCGGGCACGTCCACTAGCTTCACTTTACAACAAGCGACGGGAGGGCCGACGTGTTC
AGGAACATGATCTCCCTGAACTGTTAGCGTCACCGGCGCAGTGCACTCTGTCTGACCGTA
GCCTTCCACGATCAAACAACCGAGGGCGCATCTCGCGAAAGTCAGTACGTTTCCTGCTAA
AGGCGCTGATCCGACGACCATTATCCGAAGTCGTCCTCCCATACCTTCTCGAACCTTGCG
GAAAACTAACTTGTCCCATATCGAGTCAGCACGAACTATTCCTCTCTTCAATTCCGATTC
TTTTGCGGATAGCGCCATGTTGAAAAGTAATTTCTTGATTTTCGAGTTGGCGATCTCAGT
CTGGGCTTTGTCGTACAGTCTGTTCAGGAGACGTGGAACAGCCGGCATCATGGTCGGCTT
AAGAGCGGTGAGGTCATCGCCCAGCCTCCTTATATCGCCACTGTAGAAACCAACGGCTCC
TCCCACCATGTAGAGAGCATTCTCGCAGCATCGCTCCAGCATGTGAGCTAAAGGCAGGAA
GGAGATCATGATGTCGTTCTTGGTGGGTCGATGCTCGCCGAGTTGCATCGTAACGCTGCA
CATCGAAGCTACAACGTTCTCGTGAGTCAGCATAACGCCTTTAGGCATCCCAGTCGTTCC
GGACGTATAACATATTGTACAAAGGTTTTCCGGTTTCGGTGGGACAAAAGGATGGTCCTT
TTGAGCTCCCTGTATTTCGACGTCAGAGAACTTCAAAATCTCAACACCACGGCTCTTGGC
GCGTTGAAATGTAGACGGCGATACTTCCTTAATTGTAATCAGTTTTCTGAGGCATCGAGG
CGACTGATCCAGTAGGAGATTGGCTTTTTTGTCGTCTTCACAAATTACTACAGCCATTTC
AGTTTGGTTAACAATGAAGGCACAAGCGTTCGCTCCTAGCGTATCATACAACGGAACTAT
AACCATCGAATAACAATACGCCGCCTGTTCGGTCATAATCCATTCAGGACAATTCTGCGA
ATAAATACCGACAAATGTAGTCTGACCGGGAATGAGACCTTGACAGAGCAGACCGGAACC
AAAATTCTTTGCGCGCAGTAGAGTCTCATTATATGTCTGCCAAACGTAAGGCTTGTTCGG
ACCCTCGCGCCAACCCAAACAGTTGCCATTGTTCGACTCTTTTACGCCTCGTCGGAAAGT
GTCGTAAAGTGTGCGTGTATCCTCGTGAAGATATCGTAGGAAACGTCCGTTCTTCGCGTC
TTTGTAGAATTTCGAAACACGAACCATCTCAGGTCCTTTGAGGGCCTCGGATTGGTCATT
AAGATTAATCGGAGGTCGAATCGGAGGAACTCCGACACAGCAATCACAGCAGGCCATTGT
TTTAAAGTAACGGTCACACAAAACACAAAATGCACCGTTCCTCTTCAAACTTCAAGCTTT
ATCACATTGCGCAATCATAACTGTCCTTTATGATGATACTTTTCAAGATTCACATTCACT
CAATATAACGCAGACGTTCTTAGATTTGAAACAAGATTTTGTTGAAGCTAAGGCTAAGCG
GTTAGCCTCTTCACTTTCGCTGCTATCTATTGGTGTCTGGCAAGAGAGTTTCGGCCAGGG
CTGCCGTTGGCACAATGAGTTAAAAATACCGCTCGAAGATGCGCTCTGCCAACTTCTGCG
TTCTTGAATGTTGGTAATAGGATAATTCGAACTTTGGTACCGCAATGCGAACGAATTTTA
CTGTCGCACTAACGATTAAGGAGAAAGGTGTTGTTTAAAA
(2500 bp)

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