SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN31347_c4_g2_i2
Scaffold_idBomo_Chr3
NCBI non-redundant
(nr)		long-chain-fatty-acid--CoA_ligase_5_isoform_X2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0001676 P long-chain fatty acid metabolic process
GO:0003824 F catalytic activity
GO:0004467 F long-chain fatty acid-CoA ligase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005743 C mitochondrial inner membrane
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016874 F ligase activity
GO:2001236 P regulation of extrinsic apoptotic signaling pathway
Transcript
Level		FPKM:0.04 TPM:0.02
ORF EntryO_BomoIG10993_complete:A_BomoIG_DN31347_c4_g2_i2
Sequence
(Nucleotide)
GCCGCGACGACTTTTTTATGTTATATTAAATATGTTTATGTTTTATTAAATACGTTTTAT
ATATTACGATGCAATGATACCAACCTTCACTTTACAACAAGCGACGGGAGGGCCGACGTG
TTCAGGAACATGATCTCCCTGAACTGTTAGCGTCACCGGCGCAGTGCACTCTGTCTGACC
GTAGCCTTCCACGATCAAACAACCGAGGGCGCATCTCGCGAAAGTCAGTACGTTTCCTGC
TAAAGGCGCTGATCCGACGACCATTATCCGAAGTCGTCCTCCCATACCTTCTCGAACCTT
GCGGAAAACTAACTTGTCCCATATCGAGTCAGCACGAACTATTCCTCTCTTCAATTCCGA
TTCTTTTGCGGATAGCGCCATGTTGAAAAGTAATTTCTTGATTTTCGAGTTGGCGATCTC
AGTCTGGGCTTTGTCGTACAGTCTGTTCAGGAGACGTGGAACAGCCGGCATCATGGTCGG
CTTAAGAGCGGTGAGGTCATCGCCCAGCCTCCTTATATCGCCACTGTAGAAACCAACGGC
TCCTCCCACCATGTAGAGAGCATTCTCGCAGCATCGCTCCAGCATGTGAGCTAAAGGCAG
GAAGGAGATCATGATGTCGTTCTTGGTGGGTCGATGCTCGCCGAGTTGCATCGTAACGCT
GCACATCGAAGCTACAACGTTCTCGTGAGTCAGCATAACGCCTTTAGGCATCCCAGTCGT
TCCGGACGTATAACATATTGTACAAAGGTTTTCCGGTTTCGGTGGGACAAAAGGATGGTC
CTTTTGAGCTCCCTGTATTTCGACGTCAGAGAACTTCAAAATCTCAACACCACGGCTCTT
GGCGCGTTGAAATGTAGACGGCGATACTTCCTTAATTGTAATCAGTTTTCTGAGGCATCG
AGGCGACTGATCCAGTAGGAGATTGGCTTTTTTGTCGTCTTCACAAATTACTACAGCCAT
TTCAGTTTGGTTAACAATGAAGGCACAAGCGTTCGCTCCTAGCGTATCATACAACGGAAC
TATAACCATCGAATAACAATACGCCGCCTGTTCGGTCATAATCCATTCAGGACAATTCTG
CGAATAAATACCGACAAATGTAGTCTGACCGGGAATGAGACCTTGACAGAGCAGACCGGA
ACCAAAATTCTTTGCGCGCAGTAGAGTCTCATTATATGTCTGCCAAACGTAAGGCTTGTT
CGGACCCTCGCGCCAACCCAAACAGTTGCCATTGTTCGACTCTTTTACGCCTCGTCGGAA
AGTGTCGTAAAGTGTGCGTGTATCCTCGTGAAGATATCGTAGGAAACGTCCGTTCTTCGC
GTCTTTGTAGAATTTCGAAACACGAACCATCTCAGGTCCAGACTCCAGGAGGCTCTGTTC
GTGTAGCGTCACGAGTGGTTTCTCTGGTTTCGGTCGTGTACTTAGATAGAAGGCCGATGC
GGCTGCGACCCCGGTCAAAGCCAGAGCACCAGCTGAGCCCCCCACCATCCACAGATACTG
ATCGATCTCGCTTAGTTTAGACATCATGTTCGTCGATACTCCACGCCAAAACAAACCGAT
TTAAAACCTAAATATACGTAACTGTTTCTCCAATTTTAATATCACAATTTAACTTAGCGT
TAAGACTAAAAATTACTTTTCAAACGTTTAAAATTTAAACTAAAAAATTACTTCTAAATA
TTTACAAATTTGTACTAAGGTGTTATTATTAGACTAGCATTATTTAAATATTTGCTTAAG
AAACATACGGCATCTTGCAGTTATTATAAAAGTAACTGCGCAGCTTACGAAAGCCGCATT
TCTATATCAAGTTCACGTGAAAACGCAAAGCCGTAATCGTCGGACGCAGTACGCATGCGT
G
(1861 bp)

- SilkBase 1999-2023 -