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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN31344_c0_g1_i9
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_UBR4_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016032 P viral process
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
Transcript
Level		FPKM:1.35 TPM:0.75
ORF EntryO_BomoIG13113_5prime_partial:A_BomoIG_DN31344_c0_g1_i9
Sequence
(Nucleotide)
CACGACACCAGGCGGCGCCACTCGGCGTGCGGCACGTCGCCCGCCAGCCACGCCGCCAGG
TCCACCACCACGTTGCCCACGGACGTGGAGAACGCCGTCGCAGACATGTTGTTCGGGGCC
GGACTCTGTTCCTTGGCATTCCCGTCCTTGGGTTGTTCTCCCTCGACGGGTGTAGCGGAC
GCGGCCGGCGCGATCGGCGCCATGAGCTCCTGCATGTAGCGGAGACAGGGCAACGCCACT
TGTTGCAATGCGTATTGATGAGAGTTAGGGGACGATGTATTAATTCCTGGGATATCAGCT
AAGGCTTCAGGTTTTAGCAAAGAGCTCGCTGCGGGTGGTATCCCAGTTACTTCAGTGAGA
TGGGGGCAGCACCACACCCAAAGTTTGACTGTGCAGCGAAGTCTAACTTCCCAGCACTCG
ACAGAATCGTGAACTTTGACAAGCGAGCCCAGAAGGACGACCAAGGGACGTACCGAATTG
TTGTGATCCTGAGAGGCGGCGTGTCCCATGAGCGACAAAGTGATTCTCTGAGTCAGCAGA
TTACATAGTTGTTCGGTTGCAGGCAAGTTATCGCGCGTAACTAGGCATATCAACGCACGG
ACTTCTTCTTGACACTGCGGGGTCCCTCGGTGCAGGTTGTGCTGTACGAGTTCCTGCACT
AGGCCGAAGCGACACAAGCGGTCCCGGTGCTCGGCTTGCGAGGCGAGCGCGCGCAGCAAT
GTAAGGCAATGTTCCGCCGAGGCCAGGGAGCAACCGTAACATCCGCCACCAGATTCTTTA
GTGAAGTCGCCGTCATAGTTCTGCACAAGACCGGCGTACACGGGCAAGGTTTCTCCGTTC
ATTTGTTCACTCTGAGATCGGTCATAAGTCACTAACTCTTTCCTGCAAGCTAGCACCTTC
TGGATGATCTTGGACAAATCCTCGAAATGTCCCTTGCTATCCACACAATACTTATGCGCG
AGGGTCTGTATGACGCGATTGATTTGAGCCCCACTGAATGCTGTAGTACTTGAATTGCTG
TTCTCGTCGCCTGTGCGACTCTCCAGGCGATGTTCGGTTATCTTGTGTAAAAGAGATTCA
AGTACGGGCTTATTAGAGACGAGTTGTCGATACACCCTATCGGCTTTATCGAGCAGAGCG
CCGATGGTCTGCACCATCTTCTTGCGCTCCTCGTCGTTCTCGATGGTGTCGACGGCGCAG
CACGGTCGCGCCGTCAGCGTGTAGTCGAACTTCGCGTACTTGCAGAACCCGCACGCGTGA
CACAGGAACGGATCTTTTTCGTCGTAGTTTATAGCTCGACACTTGTGGCATTGGAAGACA
TTTTCACCGCAGTTACCACATACGCCAGGGTTTGCAGGCACAGATTGGGAACAACGTGGG
CACTGTAGTGATTCTCCGGTAGCCTGTTGGTTCTCATAGAAATCGGCATACTCCATCATT
AGGTTACATGCCACTATTGGCAAAGGGAAATCGACACGAACTTCCGTCTGGCCGGACTGT
AGTTGAACGCGTTTAGCTTTATGCCACATTCCGGGTCTATTTTTAAGTTCCTGCACAGCC
TGAACGGTGCGGTTATTGTAGTAGAAATTAATCGTTCGGACCATCTTGCTGCGTTTGATA
TCGCCGATGCGAAGACTGATACGACTGATCATGTGACTGTTCACCAACTTCACGATTTGT
GTCGTAGTTGTGAACTTTGAATCAATTTTTATAGTCGGAAGTTTGATGGTAGTCATAGGA
ACTTCAGGGTTGTTGCATACAAGACACGGCTCAGACTCCAAGTAGTACCCATCAAGCTCT
ACATAGGAGCTTAATGCCGCATACAGCGCTGCATTGCCGTGAGAAGATAGTAGCTGGTTC
TGTTTCCTGAGGAGTTCCACTGCACTAGCTACGAAGCTCTCTGTCTCAATGTTTGGTGTC
TTCAGAGTGAAATATCCGAGTAGGTCAACAAACTGAGCTGCTTTCCGGCCGTACTGCGGC
AGGGTCGGCCAGAGACCCCACATCATCGACACAAGCGAGGCTTGTTCGGACTGTGAAGAG
TTGTTGTATATGGCAAGGAGCAACCCGTGTGCTTGCCAACGCACAGACGTCGAATTAGTC
TCCAGAAGGAATGCTTTCACAAACATTTTGAGTTCGTCTTGGTTGACTTGTTTCAATATT
TGTTGGACGAGCGGCCCAACTTTCTGCTCTTGGAACTTGGAACCGTCGGAAGTGTAACTA
TCGTTTTCGGCACTGCGTTCACGCTCGGGCCAATCAGTTCCAGCTTGCTTGTTGTCCTGC
TTGGGCGTGGCGGAGGCGGGCGCGCAGAGTGCGGCCTGCAGCAGCTGCAGCACGGTGGGC
GCCACGTGCGGGTGCAGGCGCCGCGCCACCGCCACCAGCCAGCCCAGCGCCTCCGGCCGC
TCCGACAGGCACGTGTGCTGCCAGTTGCCAGTGCGCACGCTCACTATCTCCGCACACGCC
TTCAGATGGTCCATGAGCTGCACGAGCTTGTCGTAGGCGGTGTCGGTGGCGAGCAGCGCG
CGCGCGGCGCTGAGGTGCGCGTCCAGTGCGTGCACGTCGCGCAGCTGCCGGTACCGCTCG
CGGGTGCCGCACAGTAGCAGCAGTAGTTTGCGAACTTGCTTCCTCAATGGAGTTTGTTGA
TTCATCATATATTCACACAATAGAGTCCTCCAGCGTGCGTCAAAGTTTGCTGGGTCGCAG
TGCTTGTAGATTTGACACGGCAGACGCAGGGCCATTTCCATTAGTAGTTGTGGATAATTA
TCGAACACGTCGAGAGCATGACTTTTGACATAGTCCTTGACGAAGAACGGTTGCATGTCC
GGCAATGGTTGAGGCGGCTGCGGTTTGAGCAGTTGCTGTCCAGACGGAGTCGCACCGGCA
CTGTTAGTCTTCTCTTTCCAATAAGGCAGCAGGTGAGCCAGCACGCGATAGCAGTGCGCG
GGCGCGGCGGCCCGCTCCAGCGCTGCGGCCGCCAGCCGCGACACGTGCGCCGCGCTCGTC
GCGCCCGCCGCGTCCGCACGCTGCGCCGCACCGGTCGACGTCGAAGTCTTCCAACGTGCC
ATCAGTACACTGAGCAGTCTCATTATGACGAGTTGTAATTCTCTTCGATTGGTCCTCTCG
TGGATCGGTGGCAAGGTTTCCTCTCCCTGATTGTCGAGCTCCGACACCAACAGTTCCAGG
CGCATGATAGCTAGCTGTAGTTCACCGCGCTCAGTACGGTCTTCAGTGGGGGCATTCTCT
TCAGGTTTCATGTCCAATTCTGCTACTAGCAGCTCTAACAACCTGTCTAGTACGGCTCGA
TCGCGTTCCAAACTTGAATCCAAGTCGCTGGCTAGCATTAGGACGACCTGGAAGAATGGT
ATCGCTCGTACTCCAGGCAAATTCCTAAGAGTGGGCAGAGCGTCTAGAGCAGCCGAGAGC
ATGGACAGGCGCAGTGCGTGAAGCTTACGGCTTTCACTTTCGGCTTCCACGGTCTTTGAG
GTTGACGCAACCGGTTGGGAAGAAGACGTCGATGGCCCAGCTGTGAAGTGATAGTTAAAT
TTAATACTCAAATCAAGACAAATTTCACATTTAATACATAAAATTAATACCATTTAAGAA
TATAGCATAGATTAAGTTGTAGCTTATTTTGTAATTTATATTTTATATAGTTATGAGTCT
CAATTTGCCACTATAGTGAAGTTTTAACAGATGCCCG
(3697 bp)

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