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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN31344_c0_g1_i5
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_UBR4_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016032 P viral process
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
Transcript
Level		FPKM:3.65 TPM:2.03
ORF EntryO_BomoIG13093_5prime_partial:A_BomoIG_DN31344_c0_g1_i5
Sequence
(Nucleotide)
CACGACACCAGGCGGCGCCACTCGGCGTGCGGCACGTCGCCCGCCAGCCACGCCGCCAGG
TCCACCACCACGTTGCCCACGGACGTGGAGAACGCCGTCGCAGACATGTTGTTCGGGGCC
GGACTCTGTTCCTTGGCATTCCCGTCCTTGGGTTGTTCTCCCTCGACGGGTGTAGCGGAC
GCGGCCGGCGCGATCGGCGCCATGAGCTCCTGCATGTAGCGGAGACAGGGCAACGCCACT
TGTTGCAATGCGTATTGATGAGAGTTAGGGGACGATGTATTAATTCCTGGGATATCAGCT
AAGGCTTCAGGTTTTAGCAAAGAGCTCGCTGCGGGTGGTATCCCAGTTACTTCAGTGAGA
TGGGGGCAGCACCACACCCAAAGTTTGACTGTGCAGCGAAGTCTAACTTCCCAGCACTCG
ACAGAATCGTGAACTTTGACAAGCGAGCCCAGAAGGACGACCAAGGGACGTACCGAATTG
TTGTGATCCTGAGAGGCGGCGTGTCCCATGAGCGACAAAGTGATTCTCTGAGTCAGCAGA
TTACATAGTTGTTCGGTTGCAGGCAAGTTATCGCGCGTAACTAGGCATATCAACGCACGG
ACTTCTTCTTGACACTGCGGGGTCCCTCGGTGCAGGTTGTGCTGTACGAGTTCCTGCACT
AGGCCGAAGCGACACAAGCGGTCCCGGTGCTCGGCTTGCGAGGCGAGCGCGCGCAGCAAT
GTAAGGCAATGTTCCGCCGAGGCCAGGGAGCAACCGTAACATCCGCCACCAGATTCTTTA
GTGAAGTCGCCGTCATAGTTCTGCACAAGACCGGCGTACACGGGCAAGGTTTCTCCGTTC
ATTTGTTCACTCTGAGATCGGTCATAAGTCACTAACTCTTTCCTGCAAGCTAGCACCTTC
TGGATGATCTTGGACAAATCCTCGAAATGTCCCTTGCTATCCACACAATACTTATGCGCG
AGGGTCTGTATGACGCGATTGATTTGAGCCCCACTGAATGCTGTAGTACTTGAATTGCTG
TTCTCGTCGCCTGTGCGACTCTCCAGGCGATGTTCGGTTATCTTGTGTAAAAGAGATTCA
AGTACGGGCTTATTAGAGACGAGTTGTCGATACACCCTATCGGCTTTATCGAGCAGAGCG
CCGATGGTCTGCACCATCTTCTTGCGCTCCTCGTCGTTCTCGATGGTGTCGACGGCGCAG
CACGGTCGCGCCGTCAGCGTGTAGTCGAACTTCGCGTACTTGCAGAACCCGCACGCGTGA
CACAGGAACGGATCTTTTTCGTCGTAGTTTATAGCTCGACACTTGTGGCATTGGAAGACA
TTTTCACCGCAGTTACCACATACGCCAGGGTTTGCAGGCACAGATTGGGAACAACGTGGG
CACTGTAGTGATTCTCCGGTAGCCTGTTGGTTCTCATAGAAATCGGCATACTCCATCATT
AGGTTACATGCCACTATTGGCAAAGGGAAATCGACACGAACTTCCGTCTGGCCGGACTGT
AGTTGAACGCGTTTAGCTTTATGCCACATTCCGGGTCTATTTTTAAGTTCCTGCACAGCC
TGAACGGTGCGGTTATTGTAGTAGAAATTAATCGTTCGGACCATCTTGCTGCGTTTGATA
TCGCCGATGCGAAGACTGATACGACTGATCATGTGACTGTTCACCAACTTCACGATTTGT
GTCGTAGTTGTGAACTTTGAATCAATTTTTATAGTCGGAAGTTTGATGGTAGTCATAGGA
ACTTCAGGGTTGTTGCATACAAGACACGGCTCAGACTCCAAGTAGTACCCATCAAGCTCT
ACATAGGAGCTTAATGCCGCATACAGCGCTGCATTGCCGTGAGAAGATAGTAGCTGGTTC
TGTTTCCTGAGGAGTTCCACTGCACTAGCTACGAAGCTCTCTGTCTCAATGTTTGGTGTC
TTCAGAGTGAAATATCCGAGTAGGTCAACAAACTGAGCTGCTTTCCGGCCGTACTGCGGC
AGGGTCGGCCAGAGACCCCACATCATCGACACAAGCGAGGCTTGTTCGGACTGTGAAGAG
TTGTTGTATATGGCAAGGAGCAACCCGTGTGCTTGCCAACGCACAGACGTCGAATTAGTC
TCCAGAAGGAATGCTTTCACAAACATTTTGAGTTCGTCTTGGTTGACTTGTTTCAATATT
TGTTGGACGAGCGGCCCAACTTTCTGCTCTTGGAACTTGGAACCGTCGGAAGTGTAACTA
TCGTTTTCGGCACTGCGTTCACGCTCGGGCCAATCAGTTCCAGCTTGCTTGTTGTCCTGC
TTGGGCGTGGCGGAGGCGGGCGCGCAGAGTGCGGCCTGCAGCAGCTGCAGCACGGTGGGC
GCCACGTGCGGGTGCAGGCGCCGCGCCACCGCCACCAGCCAGCCCAGCGCCTCCGGCCGC
TCCGACAGGCACGTGTGCTGCCAGTTGCCAGTGCGCACGCTCACTATCTCCGCACACGCC
TTCAGATGGTCCATGAGCTGCACGAGCTTGTCGTAGGCGGTGTCGGTGGCGAGCAGCGCG
CGCGCGGCGCTGAGGTGCGCGTCCAGTGCGTGCACGTCGCGCAGCTGCCGGTACCGCTCG
CGGGTGCCGCACAGTAGCAGCAGTAGTTTGCGAACTTGCTTCCTCAATGGAGTTTGTTGA
TTCATCATATATTCACACAATAGAGTCCTCCAGCGTGCGTCAAAGTTTGCTGGGTCGCAG
TGCTTGTAGATTTGACACGGCAGACGCAGGGCCATTTCCATTAGTAGTTGTGGATAATTA
TCGAACACGTCGAGAGCATGACTTTTGACATAGTCCTTGACGAAGAACGGTTGCATGTCC
GGCAATGGTTGAGGCGGCTGCGGTTTGAGCAGTTGCTGTCCAGACGGAGTCGCACCGGCA
CTGTTAGTCTTCTCTTTCCAATAAGGCAGCAGGTGAGCCAGCACGCGATAGCAGTGCGCG
GGCGCGGCGGCCCGCTCCAGCGCTGCGGCCGCCAGCCGCGACACGTGCGCCGCGCTCGTC
GCGCCCGCCGCGTCCGCACGCTGCGCCGCACCGGTCGACGTCGAAGTCTTCCAACGTGCC
ATCAGTACACTGAGCAGTCTCATTATGACGAGTTGTAATTCTCTTCGATTGGTCCTCTCG
TGGATCGGTGGCAAGGTTTCCTCTCCCTGATTGTCGAGCTCCGACACCAACAGTTCCAGG
CGCATGATAGCTAGCTGTAGTTCACCGCGCTCAGTACGGTCTTCAGTGGGGGCATTCTCT
TCAGGTTTCATGTCCAATTCTGCTACTAGCAGCTCTAACAACCTGTCTAGTACGGCTCGA
TCGCGTTCCAAACTTGAATCCAAGTCGCTGGCTAGCATTAGGACGACCTGGAAGAATGGT
ATCGCTCGTACTCCAGGCAAATTCCTAAGAGTGGGCAGAGCGTCTAGAGCAGCCGAGAGC
ATGGACAGGCGCAGTGCGTGAAGCTTACGGCTTTCACTTTCGGCTTCCACGGTCTTTGAG
GTTGACGCAACCGGTTGGGAAGAAGACGTCGATGGCCCAGCTGTAACAGCGACAGGCGCA
ACGATGTTAGAAGCCGGCATTGTCCCAACCGTCGGAGCTGACATCGTGTCTCCATACGCG
CTACTGCGTCCAGAAACTCCGCCAATACTGTCCGCGCCAGAGCCGCCGCTTTCGGAGCCA
CCGGAGCCCGGAACCTCGGCCGGTGACGTCCTCAGGGTGCTGCCGTCTGTCGCTGCAGTG
CTGCCTTCATCGTCAGACCCGGGCGGTGAGACAGTAGCGTCGCTGTAGCCGGGCGCGGAG
GGGGGCGGCGCGGAGGGCGGCGGGGGCGCGCGGCGCGGCTGTTCCTGAAGCGAGAGCGCG
ATCGCGAGCTCCACCATCGTGTCGTCGTCTGCGTCCGGCGGGATGTCCAATAGGGCTTCC
AAGCCTCCATCAGGGGCGAGAAGAACCATAGGCTCGAGCGAATCATCGACGTCCATGAAT
TGATTGTCTTGATGTTCGTCACGATTAGCACTGAGATCGGACTCGGAGACCGCGGCCTCC
GTTATGGAGCTCGTCGGCTGAGCTGTGGTCACCGAAGAAACAGCACCGGGTGTATTCGGT
GGTGACGGAATAAATACACGACGCCGTTTAACTCTCGGTCTAAGAACTCTCATCAGGGCA
GCTTTAGTGCCGAAGCTGATACTTTGATCCTCGGCGAGTAACAACGACAGATAAATTTGA
TTTCCAAATTCGATACATTCATGATCTCCGTGCAGTTGGAATGCGTGTATTGTATCAGCG
AAGGCGTGCAATGTCAGCTCAGAGTGTCGAAGACCATACGAAAGAATCCCAGGAGGTCCC
CCAGCTGTAGACTTGCAGGCGGCTAAGCGCCACAGCACGCTCGCAAGTAACGCACACAAA
TGTGGCTCCTTATCTTTTTCGTCTTGACTCGTATTTTTCCATAGAGCAGACCATTCACCA
GTAGATGGTTTCTGCGGCGTAGGAGCGCTATATTTAACTAGATGAACTGGTCTCGCCACA
GCGACACCTCGGGCTAGCAGGACAAGCCGGAAGTACGCCTCCGGGTCAATGTTATGAGGG
TCCGCCGTGTCACGGAGCTCGCGTAGTGATGTACATACGTATTTTAGTATGGCTTGATCC
TTGTACTGGTGATAGTTGGCATTGTGCACGGCGCGCAGCAGACACTGCGCCCGCGCGTGC
AGGTGCGCGCTGGCGGGCGCACACAGCAGCTTCCTGGCGGCCTCGGCCCCGTCCTCCGCT
CCGCCCGCCGCGCCCACCGACGCGGGCGTGCCGGCTCCCAGCTCCAGCGTCTCCAGGGCC
GCACAAGCGAGGCGCTCTAGAGGGCTCGGCTTCCACATTCCGCTACTGCCTTCTGCCTCC
TGTACGATTTTGCTAGATGACGGACAAGCAGAGGGATCTTCGCTTTCATCGGGCCAGCCA
AATTGTTCCTTAGTCTTACCGTAAACCTTAACCGAATCGACCATTGTAACAGCTTCAGCG
TCCGACGAAGGTCCGAAGTTTATCACCAATTTTTTATCTGACTGAAGTGATTCCTCACGA
GTCAAAGGCATGTCGAACCAGCGGTTGCGAGTAACGTTCGTAGTTTGTAAGGAACGACCC
AGTATTTCTATATAAGCGGGAGTTTTCGTAACATCTTGACTGCCCAGCAATACTCGGAAG
CCACAAATCACCATATTCGGGTCTGAATTTATGACTTCCAAAGAAAATCCAGTCACTTTG
GTAGACACTACATACAAACCAGTTGTATTGAGTCGGTGTTTGATTAACGCAGTATTGTAT
ACTTGGAGAAGATCGTTTCCACCAAATTCGATGTCATTCATTACAACACAATGCTCAAAG
AAATCTATAGGGAACTGAGTTGTTCCGTTGGCACCCGACTTAGATACGGCTTGATGCGAT
TTCCGCGGCGCGTGGTGCGTGTTGGTGCGGGCGCGGCGGCGCGGCGCGTGCGCGGGCTGC
ACGCTGGGGGCGAGCCAGTACCCAGTCTTGTCCGGGTTGGCCGCATACATGCGGAGGCTA
CCGTCTTCACACAACAGAATCAACGTGCTTTTCTGTTCGCCTCCGCCGCCGCACCAGTGG
CGCACCGCCACCATGTCCGTTATCTTGGCTTTGGCCGGGACGACCTTTATTTCTTGCACG
AAAATGTTAGTAGGTGTCAACATAAGCACGACCGGGTTGTTCGACGCTTGCATGACAGCT
GTGATCAGGCCGGGATGTCCGGGCACCTCCGCCCACTGACACAGCGACTGCACGCCCCCC
TGCTTGCCGCCGCCGCGACCGCTCCCTTCCTTCTGCGTTGCGGCCGCCGACAACGTGATC
ATCGCTGTTCCTTTTAAGCTCTCCTCAACAGTGTTCAACGGAGCAAGGAAGCTTTTGCCT
TGAGCGTACGAAAAGAATAACATTTTCAATGTATGCGAGTAGTATATGGAGACTCCACCA
CCGCCAACCAGTCCGGCCACGTCCTGTATTTCAGGATGGAGTACTTCAAGAGTGTTGGTA
ACGTAGAAGGTTCCGAGGCTCGCCCTGGACTCTTCACTCATGGGCTGCCAGTAGATGTGG
CCGGCAGAGCTCATGCAAAGCATGTGCATAACACCGTCTTGGTTCACGAAAGTTACATCT
CGTACGTTTCCACTAGGTACGAGGAAATGATGCATAGGGTTGTTCAAATCCTTGCTGAGG
TCATAAATCTTGACAAAATCCGAAGTTATCAGCGCAAGTTGCGTCTGTGATCCAGGCAGC
CATATTGCTTTAATTACATAGTTGTTACCCTCTAGACCGGTGTTGAGAACTAGGTGATCT
GCTACTGCACCTGCACTGTTAAAGGTCAGGACATGACATTCCTTGAGACCGCAGACTGCG
AGCAAATCTTCATTCCACGGGTTCCCGCCGAGACTTAGAACCGTGAACGGTATCGGCGCG
GATGACAAGCGCGTTAGCGTAAGTTTATGTTTCGACGAATCAGCTTGTTTCAGTAAAGTT
GATAGCTGGAGAACTGTGATCTTGCCTTTCTCGTGAGATACAGCTAAATGTTGCCTGCGT
CCTTGAGGCGACGCCAGGCAACACATGGCAACACGTCTTAGTTTATGTGCAGTCATCAGT
TGCCTGATTGTTTGTCCGTTTTCTCCAGTGTATGACATGCGCACGTTCTCGAATGCGCCC
TCTTGTGAACCTAACGTGGGCAGCATGAGGTTGTCTGTGTGCGTGAAGCGTTTGTCGCCG
AGATGCAGATGTGCGAGTGCCCGCATGGCGCGGCCGTGTGCGCCCGTGGGAGCGTGTCGC
TGGCACGCCGCACGCACGGCCCCGCCCAGCGCCTCCAGCAGGCGGCGCACGCGCTCCATG
CACGCGCCCCATCCGCCGTACGACGACAGAAACGCGCGACACCCTTGTATGTTGTGTGCG
TGCACGGGTCGTCTGGGCGGAGTCATGAGCGCGGGCGCCACCGGGCTCGAGGGCCGGCGC
CGGATAGACGGAGCCGGAGTGCTTTCCTCTGCACCTGTTCTGGTCCCCGCGGCGCCGCTC
ACGGAACGCTTCACCAACGCTTGACAGCTGGAGTCGGGCTTGGCGCCACAGTCGCAGAAG
AAGTTCCCGAACTTCGCATAGGATACATCGTGTCCTCTGTGACAGACTCTTGCGCACACA
GTACACACGCCGACGCCATCGACCATCTTGCACGTGTGACAGTGATACCAGTGTTGGTTC
ATGAACTCGCGTTGAGTCACCGTGAACGTGCACAGCTTGTACTGGAGCATAGCATCTTCA
TCCGAGTCGTCGGCGCTAGTGTCGTCTTCGTCTTGTTGCTCGTCAGTATAATCAAGATCA
AAGCCAAGATCAGCAGGTGACTCCCATGTTGGACTGACTGAACGCCAAGATTGCGGCGGT
GAAATGTTGATAGAGTGCAAGGCGTCAGTTAAGTAAGACAACAGAACGCAAGCTGATTCG
ATCTGCGGTGCGAGAGTACCGTCCACTTGTCCTTCCTCTAACTTCTCCAGTATTTCCGGA
CTGCTCAGGTTGTCGACGCAGGTGGCGAGCCAGCCCACGGCCGCCGGGAAGAGCAGTCTG
TGGTCGGAGCCGGCGTGCGCGTCCGCCAGCCGACACATCTCGCGCAGCAGCAGCGGTGAG
CACGCGCTGTCTCCGCACACGCTGATCAGCGCGGTCAGCATCCGCTCACTCACCTTCTCG
TTGCAATGCAGTACGACATGTTTGCAGAGAGCAGAAAGTAGCGTGGCATTGTCATTGGCC
ACGTCGGTGAGAGGGGCGGGAGGCGTCTCCACGGAGGCGGTGGGCGCGACGCTTGTGGCA
GGAGGACCGTCTTTACCCTCCGACCAACTACTCGTTTCCGAATTACCAGACTGTTGAGCA
ATTTCTGATTGTGGTCTCGGTGCTGGAGAAGGCGTGTCGAACACATCGACGGGCACGTCC
GCGTCGTGGCGCTGCGGCGGCGCGTCGCTGGCCGAGCGCAGCACGCGGCTCAGCGCGTTG
TGCAGCACCGTCGACACCGGGTTCAGTAGCGTGTCGGGGGCTGAGGACGTGGGCGTCGCC
AGCTCTGTTTCGGTCGGAGTCCCATTCGCAGTGGCCGTATTGCCATTTGTCGCCACTGGC
GCTCCCACACAGATATGAGAGAGGAGAGTACCTAGCTCCTGCTGGTCGGCGACTCCGATG
AACTGGCACACAGACACGCACAAGCTGCTGCTCAGTTCGGAGCTTTCACATCCACTGAAT
ATTTTGATGAACAGTTTAATTACTCTCTCGGAATATGTACTCCTTGCATTCGGCGATGAT
ATTAATATTCTTCCTAGAGAATAACCGGAGTTTTCACAGAACACGTACTCGTACGCGAGT
CGGCCGGCTTGTCGGTCTAGAATCTTCTCCCAGTACTTTACCATATGTTTCAATATTTTT
TCCGTCGAAGGCAAGAGATATTCGACAAGTACAGGATATGTTGTCTTTAAAATGTGCTCA
TGGATTAGCTGTTCCGCTCTGACAACTTGTGGCACTAGTATGTTGATAGTGGCGCCTAGT
GATTCCGCCATGAATTCCAAACGAGCGTCAGTCAAGGCCGGGACAATTAGCTCCAATGTC
CTTCTAGTAAGTTCGAGGCTATCTGTCAGCTTATTCGCTCCCAGCTCGAGTAGTTTAGCC
GCGGAGTAGGACAGCATCATAAGGGACAGTCCAATAGAGTATTTCGTGTTGGCACTTATC
GACTCGCAGTGCTGCGACACTAGCTTCAGGACGGCGCTCTCAGATGGTATAATGTGAGAA
GCGTAAAATGCCAGGTTGACGAGCGGCGGCGGGTTGGCCATCTTGTCGAGCGCGGCGGCG
GCGGCGGGCGGCAGGTGCGCGCGCAGCACGGCCAGCGCGGCCAGGGAGCGCGATACGTCG
CCGCCCTCCGCCACGCCCTCCGACTCGGAGCCCGAGCTCACGGCCTCGCTGCCAACCACC
TCGATGTTCCAGGTCTCTCTCCTCTCCCTCGTCGGCTCCGCGGGGTGGCTGCATCAAAAC
TTTTGTCTGAGGTGGAGAGTTTAAAGGGTACGCCTGAGTACTTTGCCCTAGCCATGTTCG
TTTTCAGAAATTGGAAGTCCTCACCGAGGCGAGACAGTATAATGCTCGAACAGCCTTCAG
TGCGCACAGTTCGGCGCGGCCCGGGGCCCCCGTGTTGAGTCCTGACCGTCAATTATCAAC
TCCGTCCGTCTCGCTCCATACAGAAGAAGGCCAATCCAATTAACGACAGCTTCGATCTGG
CCGTACGTTTGGAGTCCCTCCTGGTTTCCTTGTTTAGCACCCCCCATCTGCCTTTACAAT
TGCAG
(9305 bp)

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