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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN31344_c0_g1_i12
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_UBR4_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016032 P viral process
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
Transcript
Level		FPKM:1.89 TPM:1.05
ORF EntryO_BomoIG13132_complete:A_BomoIG_DN31344_c0_g1_i12
Sequence
(Nucleotide)
TATGGTTTGTGTAAATAACATTTTTTTGTGTGGTAAATATCATTCTCACCTCAATGGAGT
TTGTTGATTCATCATATATTCACACAATAGAGTCCTCCAGCGTGCGTCAAAGTTTGCTGG
GTCGCAGTGCTTGTAGATTTGACACGGCAGACGCAGGGCCATTTCCATTAGTAGTTGTGG
ATAATTATCGAACACGTCGAGAGCATGACTTTTGACATAGTCCTTGACGAAGAACGGTTG
CATGTCCGGCAATGGTTGAGGCGGCTGCGGTTTGAGCAGTTGCTGTCCAGACGGAGTCGC
ACCGGCACTGTTAGTCTTCTCTTTCCAATAAGGCAGCAGGTGAGCCAGCACGCGATAGCA
GTGCGCGGGCGCGGCGGCCCGCTCCAGCGCTGCGGCCGCCAGCCGCGACACGTGCGCCGC
GCTCGTCGCGCCCGCCGCGTCCGCACGCTGCGCCGCACCGGTCGACGTCGAAGTCTTCCA
ACGTGCCATCAGTACACTGAGCAGTCTCATTATGACGAGTTGTAATTCTCTTCGATTGGT
CCTCTCGTGGATCGGTGGCAAGGTTTCCTCTCCCTGATTGTCGAGCTCCGACACCAACAG
TTCCAGGCGCATGATAGCTAGCTGTAGTTCACCGCGCTCAGTACGGTCTTCAGTGGGGGC
ATTCTCTTCAGGTTTCATGTCCAATTCTGCTACTAGCAGCTCTAACAACCTGTCTAGTAC
GGCTCGATCGCGTTCCAAACTTGAATCCAAGTCGCTGGCTAGCATTAGGACGACCTGGAA
GAATGGTATCGCTCGTACTCCAGGCAAATTCCTAAGAGTGGGCAGAGCGTCTAGAGCAGC
CGAGAGCATGGACAGGCGCAGTGCGTGAAGCTTACGGCTTTCACTTTCGGCTTCCACGGT
CTTTGAGGTTGACGCAACCGGTTGGGAAGAAGACGTCGATGGCCCAGCATACGCGCTACT
GCGTCCAGAAACTCCGCCAATACTGTCCGCGCCAGAGCCGCCGCTTTCGGAGCCACCGGA
GCCCGGAACCTCGGCCGGTGACGTCCTCAGGGTGCTGCCGTCTGTCGCTGCAGTGCTGCC
TTCATCGTCAGACCCGGGCGGTGAGACAGTAGCGTCGCTGTAGCCGGGCGCGGAGGGGGG
CGGCGCGGAGGGCGGCGGGGGCGCGCGGCGCGGCTGTTCCTGAAGCGAGAGCGCGATCGC
GAGCTCCACCATCGTGTCGTCGTCTGCGTCCGGCGGGATGTCCAATAGGGCTTCCAAGCC
TCCATCAGGGGCGAGAAGAACCATAGGCTCGAGCGAATCATCGACGTCCATGAATTGATT
GTCTTGATGTTCGTCACGATTAGCACTGAGATCGGACTCGGAGACCGCGGCCTCCGTTAT
GGAGCTCGTCGGCTGAGCTGTGGTCACCGAAGAAACAGCACCGGGTGTATTCGGTGGTGA
CGGAATAAATACACGACGCCGTTTAACTCTCGGTCTAAGAACTCTCATCAGGGCAGCTTT
AGTGCCGAAGCTGATACTTTGATCCTCGGCGAGTAACAACGACAGATAAATTTGATTTCC
AAATTCGATACATTCATGATCTCCGTGCAGTTGGAATGCGTGTATTGTATCAGCGAAGGC
GTGCAATGTCAGCTCAGAGTGTCGAAGACCATACGAAAGAATCCCAGGAGGTCCCCCAGC
TGTAGACTTGCAGGCGGCTAAGCGCCACAGCACGCTCGCAAGTAACGCACACAAATGTGG
CTCCTTATCTTTTTCGTCTTGACTCGTATTTTTCCATAGAGCAGACCATTCACCAGTAGA
TGGTTTCTGCGGCGTAGGAGCGCTATATTTAACTAGATGAACTGGTCTCGCCACAGCGAC
ACCTCGGGCTAGCAGGACAAGCCGGAAGTACGCCTCCGGGTCAATGTTATGAGGGTCCGC
CGTGTCACGGAGCTCGCGTAGTGATGTACATACGTATTTTAGTATGGCTTGATCCTTGTA
CTGGTGATAGTTGGCATTGTGCACGGCGCGCAGCAGACACTGCGCCCGCGCGTGCAGGTG
CGCGCTGGCGGGCGCACACAGCAGCTTCCTGGCGGCCTCGGCCCCGTCCTCCGCTCCGCC
CGCCGCGCCCACCGACGCGGGCGTGCCGGCTCCCAGCTCCAGCGTCTCCAGGGCCGCACA
AGCGAGGCGCTCTAGAGGGCTCGGCTTCCACATTCCGCTACTGCCTTCTGCCTCCTGTAC
GATTTTGCTAGATGACGGACAAGCAGAGGGATCTTCGCTTTCATCGGGCCAGCCAAATTG
TTCCTTAGTCTTACCGTAAACCTTAACCGAATCGACCATTGTAACAGCTTCAGCGTCCGA
CGAAGGTCCGAAGTTTATCACCAATTTTTTATCTGACTGAAGTGATTCCTCACGAGTCAA
AGGCATGTCGAACCAGCGGTTGCGAGTAACGTTCGTAGTTTGTAAGGAACGACCCAGTAT
TTCTATATAAGCGGGAGTTTTCGTAACATCTTGACTGCCCAGCAATACTCGGAAGCCACA
AATCACCATATTCGGGTCTGAATTTATGACTTCCAAAGAAAATCCAGTCACTTTGGTAGA
CACTACATACAAACCAGTTGTATTGAGTCGGTGTTTGATTAACGCAGTATTGTATACTTG
GAGAAGATCGTTTCCACCAAATTCGATGTCATTCATTACAACACAATGCTCAAAGAAATC
TATAGGGAACTGAGTTGTTCCGTTGGCACCCGACTTAGATACGGCTTGATGCGATTTCCG
CGGCGCGTGGTGCGTGTTGGTGCGGGCGCGGCGGCGCGGCGCGTGCGCGGGCTGCACGCT
GGGGGCGAGCCAGTACCCAGTCTTGTCCGGGTTGGCCGCATACATGCGGAGGCTACCGTC
TTCACACAACAGAATCAACGTGCTTTTCTGTTCGCCTCCGCCGCCGCACCAGTGGCGCAC
CGCCACCATGTCCGTTATCTTGGCTTTGGCCGGGACGACCTTTATTTCTTGCACGAAAAT
GTTAGTAGGTGTCAACATAAGCACGACCGGGTTGTTCGACGCTTGCATGACAGCTGTGAT
CAGGCCGGGATGTCCGGGCACCTCCGCCCACTGACACAGCGACTGCACGCCCCCCTGCTT
GCCGCCGCCGCGACCGCTCCCTTCCTTCTGCGTTGCGGCCGCCGACAACGTGATCATCGC
TGTTCCTTTTAAGCTCTCCTCAACAGTGTTCAACGGAGCAAGGAAGCTTTTGCCTTGAGC
GTACGAAAAGAATAACATTTTCAATGTATGCGAGTAGTATATGGAGACTCCACCACCGCC
AACCAGTCCGGCCACGTCCTGTATTTCAGGATGGAGTACTTCAAGAGTGTTGGTAACGTA
GAAGGTTCCGAGGCTCGCCCTGGACTCTTCACTCATGGGCTGCCAGTAGATGTGGCCGGC
AGAGCTCATGCAAAGCATGTGCATAACACCGTCTTGGTTCACGAAAGTTACATCTCGTAC
GTTTCCACTAGGTACGAGGAAATGATGCATAGGGTTGTTCAAATCCTTGCTGAGGTCATA
AATCTTGACAAAATCCGAAGTTATCAGCGCAAGTTGCGTCTGTGATCCAGGCAGCCATAT
TGCTTTAATTACATAGTTGTTACCCTCTAGACCGGTGTTGAGAACTAGGTGATCTGCTAC
TGCACCTGCACTGTTAAAGGTCAGGACATGACATTCCTTGAGACCGCAGACTGCGAGCAA
ATCTTCATTCCACGGGTTCCCGCCGAGACTTAGAACCGTGAACGGTATCGGCGCGGATGA
CAAGCGCGTTAGCGTAAGTTTATGTTTCGACGAATCAGCTTGTTTCAGTAAAGTTGATAG
CTGGAGAACTGTGATCTTGCCTTTCTCGTGAGATACAGCTAAATGTTGCCTGCGTCCTTG
AGGCGACGCCAGGCAACACATGGCAACACGTCTTAGTTTATGTGCAGTCATCAGTTGCCT
GATTGTTTGTCCGTTTTCTCCAGTGTATGACATGCGCACGTTCTCGAATGCGCCCTCTTG
TGAACCTAACGTGGGCAGCATGAGGTTGTCTGTGTGCGTGAAGCGTTTGTCGCCGAGATG
CAGATGTGCGAGTGCCCGCATGGCGCGGCCGTGTGCGCCCGTGGGAGCGTGTCGCTGGCA
CGCCGCACGCACGGCCCCGCCCAGCGCCTCCAGCAGGCGGCGCACGCGCTCCATGCACGC
GCCCCATCCGCCGTACGACGACAGAAACGCGCGACACCCTTGTATGTTGTGTGCGTGCAC
GGGTCGTCTGGGCGGAGTCATGAGCGCGGGCGCCACCGGGCTCGAGGGCCGGCGCCGGAT
AGACGGAGCCGGAGTGCTTTCCTCTGCACCTGTTCTGGTCCCCGCGGCGCCGCTCACGGA
ACGCTTCACCAACGCTTGACAGCTGGAGTCGGGCTTGGCGCCACAGTCGCAGAAGAAGTT
CCCGAACTTCGCATAGGATACATCGTGTCCTCTGTGACAGACTCTTGCGCACACAGTACA
CACGCCGACGCCATCGACCATCTTGCACGTGTGACAGTGATACCAGTGTTGGTTCATGAA
CTCGCGTTGAGTCACCGTGAACGTGCACAGCTTGTACTGGAGCATAGCATCTTCATCCGA
GTCGTCGGCGCTAGTGTCGTCTTCGTCTTGTTGCTCGTCAGTATAATCAAGATCAAAGCC
AAGATCAGCAGGTGACTCCCATGTTGGACTGACTGAACGCCAAGATTGCGGCGGTGAAAT
GTTGATAGAGTGCAAGGCGTCAGTTAAGTAAGACAACAGAACGCAAGCTGATTCGATCTG
CGGTGCGAGAGTACCGTCCACTTGTCCTTCCTCTAACTTCTCCAGTATTTCCGGACTGCT
CAGGTTGTCGACGCAGGTGGCGAGCCAGCCCACGGCCGCCGGGAAGAGCAGTCTGTGGTC
GGAGCCGGCGTGCGCGTCCGCCAGCCGACACATCTCGCGCAGCAGCAGCGGTGAGCACGC
GCTGTCTCCGCACACGCTGATCAGCGCGGTCAGCATCCGCTCACTCACCTTCTCGTTGCA
ATGCAGTACGACATGTTTGCAGAGAGCAGAAAGTAGCGTGGCATTGTCATTGGCCACGTC
GGTGAGAGGGGCGGGAGGCGTCTCCACGGAGGCGGTGGGCGCGACGCTTGTGGCAGGAGG
ACCGTCTTTACCCTCCGACCAACTACTCGTTTCCGAATTACCAGACTGTTGAGCAATTTC
TGATTGTGGTCTCGGTGCTGGAGAAGGCGTGTCGAACACATCGACGGGCACGTCCGCGTC
GTGGCGCTGCGGCGGCGCGTCGCTGGCCGAGCGCAGCACGCGGCTCAGCGCGTTGTGCAG
CACCGTCGACACCGGGTTCAGTAGCGTGTCGGGGGCTGAGGACGTGGGCGTCGCCAGCTC
TGTTTCGGTCGGAGTCCCATTCGCAGTGGCCGTATTGCCATTTGTCGCCACTGGCGCTCC
CACACAGATATGAGAGAGGAGAGTACCTAGCTCCTGCTGGTCGGCGACTCCGATGAACTG
GCACACAGACACGCACAAGCTGCTGCTCAGTTCGGAGCTTTCACATCCACTGAATATTTT
GATGAACAGTTTAATTACTCTCTCGGAATATGTACTCCTTGCATTCGGCGATGATATTAA
TATTCTTCCTAGAGAATAACCGGAGTTTTCACAGAACACGTACTCGTACGCGAGTCGGCC
GGCTTGTCGGTCTAGAATCTTCTCCCAGTACTTTACCATATGTTTCAATATTTTTTCCGT
CGAAGGCAAGAGATATTCGACAAGTACAGGATATGTTGTCTTTAAAATGTGCTCATGGAT
TAGCTGTTCCGCTCTGACAACTTGTGGCACTAGTATGTTGATAGTGGCGCCTAGTGATTC
CGCCATGAATTCCAAACGAGCGTCAGTCAAGGCCGGGACAATTAGCTCCAATGTCCTTCT
AGTAAGTTCGAGGCTATCTGTCAGCTTATTCGCTCCCAGCTCGAGTAGTTTAGCCGCGGA
GTAGGACAGCATCATAAGGGACAGTCCAATAGAGTATTTCGTGTTGGCACTTATCGACTC
GCAGTGCTGCGACACTAGCTTCAGGACGGCGCTCTCAGATGGTATAATGTGAGAAGCGTA
AAATGCCAGGTTGACGAGCGGCGGCGGGTTGGCCATCTTGTCGAGCGCGGCGGCGGCGGC
GGGCGGCAGGTGCGCGCGCAGCACGGCCAGCGCGGCCAGGGAGCGCGATACGTCGCCGCC
CTCCGCCACGCCCTCCGACTCGGAGCCCGAGCTCACGGCCTCGCTGCCAACCACCTCGAT
GTTCCAGGTCTCTCTCCTCTCCCTCGTCGGCTCCGCGGGGTGGCTGCATCAAAACTTTTG
TCTGAGGTGGAGAGTTTAAAGGGTACGCCTGAGTACTTTGCCCTAGCCATGTTCGTTTTC
AGAAATTGGAAGTCCTCACCGAGGCGAGACAGTATAATGCTCGAACAGCCTTCAGTGCGC
ACAGTTCGGCGCGGCCCGGGGCCCCCGTGTTGAGTCCTGACCGTCAATTATCAACTCCGT
CCGTCTCGCTCCATACAGAAGAAGGCCAATCCAATTAACGACAGCTTCGATCTGGCCGTA
CGTTTGGAGTCCCTCCTGGTTTCCTTGTTTAGCACCCCCCATCTGCCTTTACAATTGCAG
(6660 bp)

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