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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN31343_c4_g2_i1
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		probable_ATP-dependent_RNA_helicase_DDX47_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0006397 P mRNA processing
GO:0006915 P apoptotic process
GO:0008380 P RNA splicing
GO:0008625 P extrinsic apoptotic signaling pathway via death domain receptors
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
Transcript
Level		FPKM:19.90 TPM:11.08
ORF EntryO_BomoIG11890_5prime_partial:A_BomoIG_DN31343_c4_g2_i1
Sequence
(Nucleotide)
CCGTTTCTTGCCAGCGTGTTTAGGTTTCCCCTTGATTCGTCTGCGGACTCCGACCGCATC
CTCTGTGTCGTCGTCAGAGTCGGCACCTCGCTTCTTACCCTTCGTACTCTTCTTGTCTTC
TAGTTCTTTCATTTCGATTCTAGTGAGACGTTGGGCCTCAGCGACCCTCTCCTGCAGCAC
CATGACCTCGCTCTCCTCCGTCTTGTATAAAGGCAGCTGTTTCCCGATCAACTGTTCAAT
TCGCTGGTATAACTCCACGTCGTACTGCGTGACAAAAGTGATAGCTTTACCGGCCCGACC
GGCGCGGGCGGTGCGGCCCACGCGGTGGATGTAGTCCTTGCTGTGCAGCGGGATGTCCAG
GTTTATCACGACGTCCACGTGAGGAATGTCCAGACCTCTGGATGCTACGTCAGTACAGAT
CAACACCGATCTGGATTTGCTCTTGAATTTGTTCAGGGCTGCGAGACGTTTATTCTGAGA
CATCTGACCGTGTAGCGGTACCGCGGCCAGACCCAAGTTTCTGAGCAATAATGCACAGCG
CAGCGCACCGGCGCACGTCGAGACGAAGACGATAAACGAGTTTCCAGCCATCTCGTTGAG
AATGTGAACTAGGTATACATCCTTAAACTTAACAGGTATGAAGATGTAGGATTGCATAAG
CTTATCAACAGTCTGGTACTTTGTAGACACCTCCACTTTCACAGGATCTTGTAATGATGC
CCTTTGGAGCTTCTGCACTTTCTTCGTCATTGTTGCAGAAAAGAGATAAGTGTGGCGTTC
TCTTGGTATCACACGGAGAATCTTGTCCACTTCCACTTCGAAATCCATGTTGAGAATTCT
ATCCGCTTCATCCATTACTAAATATTTTAGAGGCCTTAAATTAAATCCCTTGGTATTCTC
CAGGTGGTCAACCAATCTTCCAGGAGTGGCGATGATTATGTGAGGTTTCTTGGATAGCAT
TAGTGCTTGTGCCACCATGTCCATACCACCAACTATTACTGCACATTTTACACCTATGCT
TGCACCAAGTGCTTCAAATTGTTCTGATATCTGAAATGCCAGTTCCCTTGTTGGTGTGAG
TATAAGTGCAAAATATCTCTGCGGGTTCTCCAGTAGTGCTTGAAGTATGGGCAGGGCAAA
GGCACCTGTCTTACCAGAACCTGTCTCGGCAAGACCAATGATATCTTTGCCTAGTAACGC
GACGGGAATAGCTTCTTTTTGAATCTTAGAGGGTTTCTTCCATTTCAATTCTTCACAAGC
CTCGCAGAGTACGTCTACAACTCCCAAATCCTTAAATGTTATTTTATCATCTTCAGTATC
TTCGTTGACATTTTCGGTTGGAGTTTGTTCCACCTCACTATCCTGGTTGGTTTCGTCTCC
ATAGCTTTCCTTGTCTGCAGTCATTTTCTCTAAATTATCATTGTTTTGGGGAATACAAAA
AAGACGCGAATATTGAAAGCATGTGTTTGAATTAGGGGTATGCTGATTTCTGATTTCTGA
TTTCTGAATCTATCACATATAATATGTGACGTATGTGTCACCAAAGAAGTAAAACTGTCA
AAAG
(1564 bp)

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