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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN31332_c2_g9_i1
Scaffold_idBomo_Chr19
NCBI non-redundant
(nr)		putative_RNA-binding_protein_15_[Helicoverpa_armigera]
Ontology
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0044822 F RNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
Transcript
Level		FPKM:12.27 TPM:6.83
ORF EntryO_BomoIG12883_complete:A_BomoIG_DN31332_c2_g9_i1
Sequence
(Nucleotide)
GAGCGAAGTTGTGTGAATTGTTTTATTTTGTCTATTTAGTGTTTCTTTAAGTTTAAATAT
GAAATAGAGGTGGTTTATGAAATGTTTAGTATTCGTGAAAGTGCACAAATGTGGAAGAAT
GAAAACAAGCCGCTTGACGTAGCTTCTCGGGATCTTCCAAAAAGTCCTCTGAAAAAGTCT
CAGTAAATATATACAGTAAATATATAAATATTGACCATTTTACTGAGATTTTATATCTCA
TTACATCTAATCCCATTTAATTTCATTTCATGTCAATTGATTGTTTCAAATTAATCAAAT
TCATTTCATTTCGCTCTGTATCATTTTTCATAAAAAAGAATACACAAAAGATTAGACCGT
ATAGTATGATGCCTTTGCCTTTACAGTTGGAAAAACAGAATTATTTAATGTCATTTTCAT
CTGTGACCCCATCCAATCCCAAAGGTCATATGATCTTAGTAAACAAAATAGTTTTCGGTT
CAAAATGATAAAATAATTTGTGAAGTTAAGTCGAAAAGTACAAAATTTTCATAAAACTAT
ACATTATTAAATCAAAAACATAAAACTTAAAATTCGTAATTTTGGCTTTAAAGCTATGTT
TATGTAAGAAATGTTTTAAAATTGTTAAAAATATAAATCGTGATTTTTTTATGAAACTCA
ATTACTCAACTCAAAAACTCAACATTAAAAATCAATGGATAGAAACCAACTTCGACTGGA
CCACCCCAGTGTCGCTATCACTGATGGAAATTATCGTACACTTTCGTATTAAGTTAGTTA
TGATTGTGCCCATTAACCTCGTCAGAGTTCGAATCTAGAATTTTCTAGATAGACCCATGT
TTTATGTTCAATAATATTCAAATGTAAAGAAACACAAAAATTCATGGACAACTGTTGTTG
AATTTGAATCAAGATTTTAACTTTATTTGTACTCTTTAAGAAAAGGTTGAATTGTTTCTT
TACATTTTTGATCTCAATTTCCATCTTTAATTTAGGTAATGCAATAGTAATTATAATGAT
AATGATATTATAATATTAATGATAATAGTAATTTAGGTAATTTTCCTTTTTTTTCGTATT
AATGAATCACATTTATATTACATTATACCTTAGCTCATTTAGTGCATGGGATTTTTTATT
TTTTATGTACCATACAACTGTAAGCATTAAAAAAATTCTATAAAGTTCAGAATTGTAAAG
AACTATTTTTAAAGTACACACAAATTACCAATACAGTGCCTACTGTGTTGTGTGAAATAT
ATCTACAGACTTACCCAGTTTCAGTTTTATATTATAATATGAAACACGTCAAATCACAAA
CAATACTGAGTCAACATTTATATCACCATATTTGTAAATTGTAGAAAATTTGTCTTCAAT
TGACTCTAAATTTGGTAATTTTACTGTTAAAACCACAACACACCACTGACTTGTTGTTCC
ACTGTACATCCTTTTATAATCATTTTTTTGCAAATTAATGGACATACCAAAACATAAATT
CACAATACTTTTTTTTTGGAACACCTTAACATCACAAAACCACTAATGGATCAACTGCAC
TGGATATGTCACTTAATCACAAGGTTTAAAAAAACAACTTTCAAAATTAAAATAATCTAT
TTGTTTTGTTCACACACTACACATCACCTAAATCATACACTGAATATTATACACTTAACT
TTAAAAAAGTAAGATAAACTTCTTTTAGTCGGATATCTAGCTGAACTAGCTTCTATACTG
TACATTTTCATCAAAGTTAATTCTGATCACTGTGAGAACACAGCACTGCACAAATATTTA
AACTTGCACATCTTATGCACCTCACATCACACACATCACAAGAATATAAAGTAAAAAGTG
TAGAACAAAAAACTTAAATTAAGAGTATATACCTACAAATAACAATACAATATACTAAAG
CAGTGTTTGAATAATTAAGCAGTGCCACCTCGTACTACTACTATAACTAGGTGATCTTCC
TTAAAACTCTCTTCAGTTAAATTGTGACACGTTCTTTTGAGAAGGTCAGTTGAAAATTCA
CATGGAGGGAAAGAATAAAGAACTCCAGTAGCTTCAGTCTCTTTGTTCAAAAGTGATATC
ACACCTGCTGCTTCTTTTTGTTTAAGATATGATACCAAATTCCTCATTGGTCGTGTTTGT
ATCGAAACATCTTCATTGGTGACTACAGCAGTAGAACCAGACACACCCACAAAAATGGCA
TGAGAGCTAGATGTGGCAATACGTTTTTGAACATCATCTAACTTAGGTTGATCCAAACGT
AATCTTTGTGTGATTCTGAGCTGTTTTCTACCATCTTCATCTTTCATGAGACTATCAATA
ATTTCAGAGTCACCGTCTGTTAAATGCAACTTAGTAGGAAACAATGAATTTTTGAGAATC
AGTGCTCCATGCCAAATTGTAGTTGCTTTACGAACTAATTCTGCCATTGTTCGTGACGAA
GATAGCATCCCACTACTTCTACGCATTGATCCATCAGAGTCACTATCAGGTGATCTACGA
CGAGATCGTGAGCGTGACCTATCGACTCCAGGCTCCCTTGATCCAGAACGACGCAAGCGA
CTCTCATATTCTGAATCTAATGGAGCACGTCTCCATTCTTCGTCACGATAATCTCCTGTA
CCATGATAGACACCTCTGTAGGAGCCACGTCCACGGCCACGATGCCCACCTCTACCCCTA
TAAGTACCATAGCTATAACCATCCTCCCAAGAACTACCTTCATATCCCTCATATCCTTCA
ACAGGCCTACCATCTTCACCAACAGGTGCACTGTAAGGTTTAGGTCTATAGGGTCCACCT
GTTCCAACGTCTGCGAAATCAATACGCAAACGTCGCTCCGGTCCCCCTAAAGGAAAGCCC
CGCATTTCTTTGACAGCAGCTTGGGCTGCATCAATAGAGTCATATAAAATATAGGCATGA
GGTTCACCCTTCACATATTCAATCTTTTTAATGGCACCAAACCTATCAAATTCTCTCTCT
AACTGTGCTACTGAAGTCCATGGTCCCAGGCCACCCACCCAGACACGTGTTGTGGGTGTA
GCTTTGCCATAACCTATTTTACATTGAAATTTGCCAATGTATTGGCCTGATAATTCAACT
TTGGCTCTGTGTGCCATGTCCAAAGTTTGATAACGAACAAATGCAAAAGCATTTCCAGTA
CCTGGAGGAGGTCTTTTAATGTCAATGTCCTCTACTATACCATAGCGTCCAAAAATTCGG
CGTAACTCTTCATCAGAAATGTTTATTTCTAAATTACCAGCGAAAAGAGTTCTTGTAGCT
AATGGATCATCTTCAGGTTGAACATGGTGTAGGTAATTTGGAAATTTATCTTTTTTGTTC
TCAATTTTCTCAAATGGAGGATGGTGAGGCCGGGGCATGTATGGACGTGGCATATAATGG
GGATGTGGAGGGTGATGCATAGGTGGTCTGTGATGCATTGGAGGCCCATGAGGACCTGCC
ATGGGATACTCATGCATAGGAGGGCGGAAATCTCTATGGTGAGGTGGCACTGTAGGAGGG
ATACCATAGGCTCTCTCATCAGGAGGGGGACGACGTCTCTCTGGTACAGGAGACCAAGCG
TATGAATAAGGGCGATCATAGTCAGGAGGAGTTATACTACGAGGCCTCGGTCTGTACTCA
GAACGTACAGGTTCATAAACAGGATCAACAATAGCAACTTTATCATACAGTATTATCCTA
GGCTTGGCATGTTTAGCGTCTCTCGCATCCTCTGCACTTCGGAAGCAGATGTAGGCTACT
CTCTCATCCAACTCATGGGATATTTTTATACTAAAGTCACCATACTTCTTATATTCTCTA
TACAAAGTATCCTTGACAATCTCATCCGACGCTTTAGGGTGTAAAGCACTAACACATAGT
ACTTTGTAGTAGCTGCGGACAGATTCATCTCGAGCATCACGAGAACGCACGTAATCATCG
CGATGAGGTGACACATATCGACCGCGCGGGCTAGGGGAGCGTACTCGACGTCGTACTCGT
TCCGGGCTTCCACGCTCGTCAGAGCTATCGTCATACCTACCAATACTGCTGCGTGTCCGT
TTTGATCGCGGCATACTATCACGCGACGAACTTCGCTTCATATTGCGAATTTTCACCGTA
ATTCGATCTCTATCTCTATCGCTACGCGGTAATCCAATCATGAAAGCTCACTTCGACGAA
CTACTATCCCAAACGAATTACAAACACTAATCACTCAGCAGATCACTGAAAACCTCAATC
TTGGACGAACTAATTCGTATTATTAAGTAGACAATTATTTTAAAATAATCACGTTCACTT
CAACTTTATTTAATGTAAATTTGAAATTAGAAGCGCTGATAAGCATCAAGAATATCGACC
ATTACATGGGAATCTCACAAAATGGCAGTTTGGCTGAGGGTTGCCAAATGTGATTTCTGA
ATTTCTTGTACA
(4452 bp)

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