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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN31324_c3_g2_i8
Scaffold_idBomo_Chr23
NCBI non-redundant
(nr)		smad_nuclear-interacting_protein_1_isoform_X3_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0007249 P I-kappaB kinase/NF-kappaB signaling
GO:0031047 P gene silencing by RNA
GO:0035196 P production of miRNAs involved in gene silencing by miRNA
GO:0044822 F RNA binding
GO:1903955 P positive regulation of protein targeting to mitochondrion
Transcript
Level		FPKM:0.68 TPM:0.38
ORF EntryO_BomoIG11938_3prime_partial:A_BomoIG_DN31324_c3_g2_i8
Sequence
(Nucleotide)
CTTCACGGCAGAAATAGGCAGGGTGGTGGTACTTACTCGCGCGGACTCACAAGAGATCCT
ACCACCAGTGTAGCTAATTAACAAATAATGGTAACAGCCGCAGCTGTACTAAGATGAATA
TTAGCCTCAATAACTAAGTGCAAAGATTACAGTAATATATCGGATCCAGTGATCGTCTGG
ACGTCGCAGAAATGAGATCTCTACAAAACGGGTAAAATAGAGTAGCTTTTAATCTCAAAC
AGATGACAACGCGAATTAAGATTATTTCCACGTCTTACGTTATTATTTCCTTTCGTGATT
ACATTGCAAGTGCCAGGAAACGAACTTTTAGCGTGTAATGAATTTGTTTACCCTGTTTAA
TTATTTTTTATTGAAAACAAATATATAATTTCTAATCTATCTTTATCTTTCTCGCATGGA
TTTACTAAATCACGAATAAAATCGGAATTGGTTTAGATGAAAGGTATTATGGCAATTATA
AGTGCTTTTAATGATTAGGGAGCGTTCGAGATCCCGCAGTTTCGAGGAGCGGCCCAGGGA
TCGCAACAGACGGCCGGAGCCCAGGGACGAGCCCCGGGACGACGAGGCCTACCGCCGCGC
TCCCGACCCGCGCCGGGACCGACCCCGCCCCGATGAACCTCGACCCGACAAACCTCAACC
CAGGCCCAGGGAGAGGAAGTCAAGGTTCGCTGACGCCGAAGACAATAAAGAATACAACTG
GGGTAAGACGGAAGTGAAGAAGGAAGACGCGAAGAATCCGAATGAAAAGGACAAGCCGAA
CTTTGGTCTCTCCGGTAAATTGACAGCCGACGCTAACACTGTCAACGGTGTTGTCATCAA
ATATACGGAACCCGATGATGCTAAACAACCCAAAAGAAGATGGAGATTCTACCCGTTCAA
AGGTGA
(906 bp)

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