SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN31318_c1_g1_i2
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		chondroitin_sulfate_synthase_2_[Bombyx_mori]
Ontology
GO:0000139 C Golgi membrane
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0008376 F acetylgalactosaminyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030206 P chondroitin sulfate biosynthetic process
GO:0032580 C Golgi cisterna membrane
GO:0046872 F metal ion binding
GO:0047238 F glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity
GO:0050510 F N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity
Transcript
Level		FPKM:0.91 TPM:0.51
ORF EntryO_BomoIG11627_complete:A_BomoIG_DN31318_c1_g1_i2
Sequence
(Nucleotide)
GTGTCTGGTGTCTAAGGTCTCACCCGAGTCGTAGTCGCTCCTGTAGAAGGAGGAGACGAG
GCTGAGGTGCACGTTGAAGCGGCCGGTGTTGGACTGCGGCTTGGCGCCGGTGGGCGTCAC
GAAGGCGGGGTGCTCGTACTGCGCGTAGCGGGAGAACGCGCTGGGCAGGTACCACTGCTC
GCCGGATATCGTGTTCATGCGGACCCGATTCAAGAAGTCTTGGTTGAAGTCGATGTGCGG
CACGGCGAGGAGCACCAGGCTGTCCCGGGGTACCCGCTGCAGGGCGAGGGCGAGCGCGGC
CCGCTGCGCCTCCTGCAGCAGCTCCACCTCGCTGGCGTGCTCGTGGCTGGGAGACTCCAG
GCTCGTCTCGACCACCTCGATCTGGGCGTCCTTGTGCCGGGACTTCAGCGCGGCCACCGT
CTCCTTGTTCTCCTTCATGAGGTCCACCTCAGTGGTGTTGCCGACGGAAGGCTGGGAAGG
CTGCTTCACTATCACCAGCAGGAGCGCGGTGTTCTTGTCCTGGTTAAGGCAGACCGCCTC
GTACCGCTGCAGGAAGGCGGCGAGGTCGGCGGCGTGGCGCGCGGTGTGCGGCGCCGCCAG
CACGGCGCTGAGCCGCGCGCTCTCCGTCACGTAGCGCACCGGCACCAGCCGCGCCGCGCC
CAGCGGACGCACCGCCTCCACCAGCCTGCTCATCTGCGGGCACACCACGCGCTTGCTGGA
ACCCTCTGTACCGACCCATAAACAATCTATATATTACTAGCGACCCGCCCTCGCTTCGCT
TCGGAAACATTAAAACACACATGACAAAAAAAAAAAAAAAATTACCCTATGTTCATCAGG
GAAAATGTCG
(850 bp)

- SilkBase 1999-2023 -