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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN31318_c1_g1_i16
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		chondroitin_sulfate_synthase_2_[Bombyx_mori]
Ontology
GO:0000139 C Golgi membrane
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0008376 F acetylgalactosaminyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030206 P chondroitin sulfate biosynthetic process
GO:0032580 C Golgi cisterna membrane
GO:0046872 F metal ion binding
GO:0047238 F glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity
GO:0050510 F N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity
Transcript
Level		FPKM:2.73 TPM:1.52
ORF EntryO_BomoIG11636_complete:A_BomoIG_DN31318_c1_g1_i16
Sequence
(Nucleotide)
GGCTCGGGTGCGCGCACGCAGCGCAGCCCGCTGCGGACCAGCACCGCCGCGGGGTCCGCC
CCCCCCGGCCCGGGCCACTCCGCCACCGCCGAGTCGTAGTCGCTCCTGTAGAAGGAGGAG
ACGAGGCTGAGGTGCACGTTGAAGCGGCCGGTGTTGGACTGCGGCTTGGCGCCGGTGGGC
GTCACGAAGGCGGGGTGCTCGTACTGCGCGTAGCGGGAGAACGCGCTGGGCAGGTACCAC
TGCTCGCCGGATATCGTGTTCATGCGGACCCGATTCAAGAAGTCTTGGTTGAAGTCGATG
TGCGGCACGGCGAGGAGCACCAGGCTGTCCCGGGGTACCCGCTGCAGGGCGAGGGCGAGC
GCGGCCCGCTGCGCCTCCTGCAGCAGCTCCACCTCGCTGGCGTGCTCGTGGCTGGGAGAC
TCCAGGCTCGTCTCGACCACCTCGATCTGGGCGTCCTTGTGCCGGGACTTCAGCGCGGCC
ACCGTCTCCTTGTTCTCCTTCATGAGGTCCACCTCAGTGGTGTTGCCGACGGAAGGCTGG
GAAGGCTGCTTCACTATCACCAGCAGGAGCGCGGTGTTCTTGTCCTGGTTAAGGCAGACC
GCCTCGTACCGCTGCAGGAAGGCGGCGAGGTCGGCGGCGTGGCGCGCGGTGTGCGGCGCC
GCCAGCACGGCGCTGAGCCGCGCGCTCTCCGTCACGTAGCGCACCGGCACCAGCCGCGCC
GCGCCCAGCGGACGCACCGCCTCCACCAGCCTGCTCATGTGCGTGTCCTTGTCCTCCTTG
GCGGTGAGGCGGAGCAGGAGGCGGTACCGCAGCGCGACGGCCGGCTCCCACTTCCAGGCC
CCCTCCACCAGCTGCACGTCCAGCGCCTCGGGCCAGCGGTGCAGCGACCACGCCCTCACT
TGGGTGAGCACCAGATCCAAGGCTTCTCTGTAAGCTCCGGTGATCGGTAATACATTGTGG
TGGTCGTCAGGAAAGAACGCGTGGGTCCCGTTAATTGCCGTCCAGCGGAGGTGGTCGAAC
CTGTTCCCCGGTAAAGGTCTGGCCAGTCCGGGATCGTCCCTGAGGCCGGCGGGCCACGTG
CTGTTCCTGTACCCGGGGGGGTGGCGCGCGGAGTTGTGCCACATGTAGCTGCGTAGTTTC
AGCACCTCCTCGTGGTCGCGTTCCAAAAACACCCGTGATATGTAAGCGTGTATCTCGTAG
AACCTGTGAGTGTCCATGATGGGATACACTGTTACAGCATCAGCCAAAGACTCAGTTAAT
GGTAGTTGATCATTTTCGATAACTACTGATGAGTAGTGTTCACCCTGTACGTCAGGGTTG
CAAGACAAATGAGCAGAGTGTAACACACAACGACCTATATTCTCGTAGTGGTGAGGAGAA
TATGAATTGCGTACACACCAGTCGAGTTCACTGTGGATAGCGCGGAGCACAGAGTTAGAA
AGGATTATTCCATTGTCTAAAGAACAATAATGACTTTCATCATCAGCTACCCTCCCCATG
TACACATCTTGGCTGACAGACAACTGAGAGACCAGCTGGGTCAACCGTCTTGCATTCACA
AAGGCTGTGTCGGATACAATGAAGAAGAAATCGTACTCCTCTAAATAATTATCTGCTAAG
TACTTCAAGGCATGAAATGGTTTTAGCATTTCCCTAGTATCTGTGAAGCCAACAACATTA
GCTAGCCCAGGTACAGTGCTCATTGCACTGGCGGTAATGAAGAATTTTAAGGCTGGCTGC
AGTCTTGCTGCTGTTCGGTTCAGAGCTGGCACTTGGACTTTGAGGGCTTCTTCCGAGCTC
AGGATTCCAGTGAGAAGGGAACCTCTCATGCCCAGCTCAGTACTGTAATAACGAGGTCGT
TGCACGCTTCTCCCAGCCGTCTGTCCTGAACCAGCTGGTTTTTCCTCCCGCTGCGGCACA
AATTCATCCTGAACTGGAGAGGCACTGCCTACAGTCGCTACACAAGGCGCCGGCTCTTCA
TCCAACGGTATAACAGCGAGAGACACCCACAAACCGATTAATAGGCCTATTAAAAAGTAC
GAGTTATGTTTTACTTGAGACACCAGGCATCGCGAGAACATTTTACTGGTTACTGTATTT
TTAATGGATGTTAGAAGACATTTATAGCGTCTCGACGCTTTTGCGAAGTTTATCAACTGA
TTTCATAGATAATTTTTACATTAAAACCAAAAGATATATTGCTGATAATCATAGGTTGAG
AAATAGAAACTCGCTGTCCTTCCGTGAGGC
(2250 bp)

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