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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN31313_c6_g3_i4
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		DNA_ligase_1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003909 F DNA ligase activity
GO:0003910 F DNA ligase (ATP) activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
GO:0051103 P DNA ligation involved in DNA repair
GO:0051301 P cell division
GO:0071897 P DNA biosynthetic process
Transcript
Level		FPKM:0.66 TPM:0.37
ORF EntryO_BomoIG11143_complete:A_BomoIG_DN31313_c6_g3_i4
Sequence
(Nucleotide)
TGCGTCCACTATCCGCGCCACCCACACTAGACGCACCGGCATTTATGAGCAAAAGCACAA
AAGCAAAATAAAATCCGTAGCATACGGTGCGTCCAGCGCAGCCAATGGATGCGTATCTTA
AGCGGTACCGTAAACATTAATAACGTGCTTACCTGGGGAAGCGGAGTGACACGCCCTTGT
GCGGGTGCAGGCGCGCGATGGCGGCGCGGTGCGCGGGCGAGAGGGACAGGTCTGCGCAGC
GCACCTCCACCACCACGGCGGCGCTGGTCCATACGTCGGCGGAGTGGGAGCTGTCGTAGT
TGTAGTAGTTTCTCGGAGAATCAATAATGTGTTCCTTCAGCATGTCGGACAAGGCCTGCA
GGTCCTCATCGGAGAAGCCGGTCCCCAGCTTGCACAGCGACTGGAACTGCTCGGACTCGG
GGTCGTAGCACGCGACCAGGAACCCTCCGTAGACGCCGGCGCGCTTGCCCTTGCCGCGGT
AGGCTCCGATAATGACAGCGTCCACCGTGTCTCCGACGCCTTCCAAGTAGTCTTTCTTCA
ACTTTAGCCAATTGTGTGACCTCCTAGCTATATCATATTTCGAATTGTCACCAGTGAGCA
TCTTCACCATGAGTCCCTCGCAGCTTTCTTTCACAGCTTCTTCAAGGAACAGCTGCACTT
CCTCGATAGTGCTGCAGTCTTTGGACGTGGCGAACTGCCATGTACCGGGCTGGGTGCGGA
AGTGTTCCCGCAGCAGCTTGCGGCGGTGCGCCAGCGTGCTGCCCACCAGCGGGGCGCCGT
TGAGGTACAGCAGGTCGAACACGAACACGCAGACCGGCACGCGCACGTCCTCCGCACTCG
CGCACGCACGCTTGCGGCTCGACAGCACCTGGAAGGGCAGCAGCTTGCCGTTGGCGGCGT
CGAAGGCGACGGCCTCGCAGTCCAGCACGCAGCTGGACACGCCCTCCTTGAGCAGCGTGG
GCAGGCGACTCAGCACGTCCGGGTACTTGGCGGTATTATTTTCTTGGTTCCTGCTGAATA
TGGCAGCGTTGGCGAAGTCCGGCTTGTCGTCGGGCGCGGCGGGCACGTGGATCTGGGCAC
GCTCGCCGTCGTACTTGTACTCGCAGGTGAACTCTTCATTCTCAAACCTGGCGAGCACGT
CGCGCACGGCGCGGGTGGGGTGCGCGAGCATGGGGCGCAGCGGCACGCCGACGCGCATGC
TGCAGCGGGAGGCCAGCGCCGCCACGCCGCCGCGCAGCAGCTCGTGCAGCAGCTCGGCCC
AGTCGGGACACTCGCAGTACGTGCGCCGCACCACCGCCACGTGCTGCTCCACCAGCGCCT
TGAACTTGTCGGCGGACATGTGCTGCGCCGCGTCGAGCTGCAGGTTGGGTCCGGGCGGCG
TGGTGGCGACGGCCAGCGCCAGCGCGTGCAGCACCGACTGCTCCGCCAGGCCGATGCGCA
GCTTCCCCTCCAGGGACCTTATTAGGAATCGTGCTTCACAATCTCTGCAGGCGACATACA
AGGACTGGATTTTATTTATTTTCTTATTCACTGATGCTTGACCAGTCATGTGAGCAATTT
CTTTTAGTGCAGCAAAAACCTTTCTTATCTGAAGTTTAGGGGCCGCAAACATTGTCTTTT
GTGCGGCTCGAGCCTGTTCTGCCACTCTTCCCATATCCCCACACTTCTGTACTGCAGACT
TCACTTGTGCTAGGGTACGGCCTGTACACTGGCCTATGGCTTTCATTAGGTACGTTTCTG
CTATGCCAAGCTCCAAACTGTGGTATGCTGGTGCTAGTTGATTTAAGCACAAGTAAATAC
AAGGCAACAAGTCTTCTGAAGTCAACACCATTACAGACCTATAAAAATTACTTAATATTT
CTATTATCTTCAGTCGAGCTGATGTTCCTTCTATAAGATCCAAAGTCTTAGCTAATGCAA
GATACGGCACTGGGTCGCCTTTAGACCAGCAAGCATCTTTTATAGGGTGGTATTTTGATT
TTGATGGATTGTATGCATTTTCTGCTACTTTCTGTATTTCTTCACTCTCATTTTCAATAT
TATCAATATGCTCGGTATTTTTCACAATATTGTCTTTTTCCTTTGATCCAACAATCTTCA
ATTTTAAGCTGTTTTCTTTTACCTCATCACGAGACAAACTCTTTGCACCCTTTTTAGGTG
ATGGGCTTTTGATTTCTTTTTTTATTTTAGCTTTTTTATTTTTTGGTGAGTCATAAGTTT
TGTTTACGCTCTTGTTTAAAGTTATAGAGTCATCATTGTCTGAAAGGTCTTCCTTTTTCA
CTTTAACTGGAGATTCTGATTCACTACTAGAGCTTATCACACGTTGTCGTTTAGCTTTAT
TTTTCGGTTTCAAAGAATCTTGGGAGTCACCGTCATTATCTATGCTGTTGGATTGTTGTC
TTTCAGAAGGCTTGTCTTTTTCGTCGGATATGGGTGATGTGTCCCCATTTACATGGCTTA
CTTTGGATCCACCATTACTTTTTATTTCCATAGGTGTAAATGGAGTTTTCTTGAAGAATG
ACGTGATACTCCTTTGAGCCATGTTGTGACTGGTTTCAGGAATATTTCAAAATTTTAACT
TGCTGGATGTCGT
(2593 bp)

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