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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN31311_c0_g14_i1
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		probable_ATP-dependent_RNA_helicase_DDX20_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000387 P spliceosomal snRNP assembly
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
GO:0032797 C SMN complex
GO:0034719 C SMN-Sm protein complex
Transcript
Level		FPKM:4.58 TPM:2.55
ORF EntryO_BomoIG11193_complete:A_BomoIG_DN31311_c0_g14_i1
Sequence
(Nucleotide)
GACTTAAAGGTCTCAGTTACCAGGTCATAAAATCCCTTAAAAAAAACCGGCTATTTCCCA
AAGCTAGAACACTCAATATTTTTAAAGAGTATCTTTACAATTGCTTTGACCACATCCAAC
CATTTCATTTAAACTAAATAGAAAATTATTTCAAGAAAAAAGCCAAAGAACTCTTGGGAA
CCATCCAATATTTCAGAATCGAATCAACCACTTTTTAAAGACAGCAGGCTATCTGAATTG
CCGTTATGTCTTTAGCTCATGATATAAGAAACAGCACAAGGACTCGTGATGTTCAAATAG
TGGAAAATGTTACGTTCACTTCCATGCTTCTTTCAGAATTTACACTAGCAGGATTGATAT
CATCGGGGTTCCAAAAACCATCTCCAATTCAACTTCATGGTGTCCCACTAGGCAAATGTG
GTTTCGATTTGTTACTAGAAGCAAAGTCTGGAACTGGAAAAACTGTTGTGTTTTCTATAA
TAGCATTAGAAAAACTAAATCTTAATAATGGTTTGCAAGTAATGATCTTGACACCTACAC
GAGAAATAGCAGCACAGATATGTGATGTTATTAAACAAATAGGATCACACCACAAGGGTC
TGAATGTCGAAGTTGTAATGGGAGGATTATCTGTAAATGAAGACATAGCTAAGTTTAAGA
AAAAAGTACACATTGTTGTTGGCAGTCCAGGTCGTCTAAAACATCTTATTGTAGGAAATC
ATATTAATTTATCTGATGTTCAACTCTTTGTGTTAGATGAATGTGATAAACTGGTAGAAA
AGCCTTTTCTGAATGATATAAACTATATATTTTCAGCTTTACCTAATCATAAACAAGTTA
TTATGAGTAGTGCCACTTATCCAGAACATTGCAAGGAAATCATTTGTAAATTTGTAAAAA
ATGCTCAACACATTTGTCCAGATAGTAACAATATCTTATTAGGCATTACACAGAAAGTAA
CTATAGTGAAGTACAATAGCAACATAGTAAAACAAACTCAGAACAGATTTGAACAATTGA
TTTTAATTTTATCCAAAATGCAGTTCAAACAGTGTTTAATATTTTGCAATTATCAAGCAA
GAGTTACAGAACTTCATAGATTATTAAAAAAATCTAAATGGCCAGTGAGTTTATTACATG
GTCAACAAGAACAACTAGATAGGTTAAATGCATTGAAAACATTACAAGAATACAAATGCA
GGATATTAATATCAACAGACTTGGCTGCCAGAGGTATAGATGGATCTAATATTGATCTAG
TCATAAACTTTGAGCCTCCTTTTGAATGGCAAACATATTTGCATAGGATTGGAAGAGCAG
GCAGATTTGGCTCTTATGGGATTGCAGTCACAATAATTAGTGAAGGTAAAGAAAGTCAAA
ACTTTAAGAACATGTTAACTTTATTAACTCCTACATTCAATCTTACTAATTTATGGACAG
ACGAAATTTTTAATACAGAAAATCGAGAAAATAATTCGATGGAAAATTGTGAAAAATTAG
AATCACATTTGAAAACAGAGAAAAATGAAAGACACGGGGAGTTGTGGGGATTACTGACTG
AAAAAGATTTACAACTACAAGCGTGTTATTTAAAAAATAATAATGACCCAGTTGATAAAT
CAAATAAATATGGGATAGAATCATTTACCAACTTAGTTAATTCATTTCAAGAAGAAAAAG
AAACCATTCAAGAAGTTCCCTATAGCTTTATGAATGAATTGCCTTTGAAAGTTGAAAATG
ATCTTGAATTATTCAACATACCTTCTACATCTACTAATGGTGTCATAGACAAACAAATTA
AAGGACAAATAGATAAAGACAATGAAATTATTCAACATAATGGCGCGCAGAAAGAAGAAA
TTATAGAAATCCTTAAAACAAAAGATAAATTCTTCAAAGAGGAAAACAATCAAAATTTAA
TAAACAAAGCCATGCTTGAATCAGGGCTTCCTATATGTTTTGGTAAAACAAAACTAAAAA
GATCTGGTGCAAAACAATACAAACATAAATATAGGGTCTGTGATCATGACAAAGATTCAT
CTTTAACCAAAAATACAACAGGAAATTTATCAGATAAAAATGAAGAAATTAAAGCAGTAG
TTCAAGATATGATGCAAAATGAAACAAAAATTCTGAATAAGAATGATATTAGAAATAAGA
AATCATCTAACCATTCTTTAAAAACGAAATCCGTCTGTGATCTAGAAGAAACTATTAACA
CGAAAGTTGAATATGGCTACACTGTTTGGTATAATACATTAAAAAATTACATGAGGCACA
TTGAATTTTCCGTATACATTGATGAGCTTTCAAGGATGTACTAATATAACAATAAAAATA
AAATACCAATTAATTTACTAATGTATTTTATTTGTTTATTTGATTTGTAAATAAATAAAA
CTTTTTCAATGAATACAGTAAAATTAATTATTGAAAATGTAACAATTTAGTATGGAGCAG
TGTCAGTGGAAATTTCTAATTAGTATGCCCATTAACATTGTTTTTACGGAGATCATTTTA
GTCTTACACTATTAGGTTCCTTAAGAATCTTCGATCATCAATAGTAACTAGATAAAGGGA
CACGTACAAAATCAAAGCAAAAACTGTCCGCGTGAATATACACATA
(2626 bp)

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