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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN31307_c1_g1_i7
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		cullin-4A_[Bombyx_mori]
Ontology
GO:0003684 F damaged DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0016567 P protein ubiquitination
GO:0031175 P neuron projection development
GO:0031461 C cullin-RING ubiquitin ligase complex
GO:0031465 C Cul4B-RING E3 ubiquitin ligase complex
GO:0031625 F ubiquitin protein ligase binding
GO:0035518 P histone H2A monoubiquitination
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0045732 P positive regulation of protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
GO:0070062 C extracellular exosome
GO:0070914 P UV-damage excision repair
GO:1900087 P positive regulation of G1/S transition of mitotic cell cycle
Transcript
Level		FPKM:3.03 TPM:1.69
ORF EntryO_BomoIG13347_complete:A_BomoIG_DN31307_c1_g1_i7
Sequence
(Nucleotide)
CAACGTATGCTATAAATTGAACGCAACTCTTTTAATTTTGACAGCCATCCGAAATTGAGA
GTGGCGCTCTCTCGCGAAAAAATACGAAAACTAATCGTAATGGTGGTGAACCAGTAAACT
ATTGACTGAGCGGAATTATTTTTATTTGTTTTCTAGATAATCTAGTTTAGAATTTCATTG
TTTAAGTGTAGTGGCTGCGGCCATATCATGCTTGCTTATGTCGGGATTAGCTGAAACTCC
TATTTCTGCCAAAGAAGGCGGTAATCTGTATAAAAAACGATCACTGCCTGTCAGCGAATC
GTGTAGCAAAAGAGTGAAAATCAACGAAATGAGCGCAGAGGAGAAAATATCAAATTTTTC
GCTAGTGAATCCAAATTCTAACGGGATAAAGATGTCATCAACATCAATGAACAAGCCTGG
CGTTACTGCAAAAAAGCTGATAATTAAGAATTTCAAAAGTAAACCGAACCTTCCAGACAA
TTATCAGGAAACGACATGGAGCAAGCTGCGGGAAGCTGTTGTCGCCATTCAGACCTCAAA
ATCGATAGCCTATTCCTTAGAAGAATTATATCAAGCCGTCGAAAACATGTGTAGTCATAA
GATGGCTTCACAGCTTTATGTTAACTTAACAAACTTGGTGGAAGCTCATGTGAAAGCCAA
CATCGAGCAGTTCTTGTCCGAGAGCATGGACAGACAGGTCTTTCTAAAGAGGATGGACGA
CTGCTGGCGAGCTCACTGCCGACAAATGATTATGATTAGAAGCATTTTTTTATATTTAGA
CCGAACCTATGTCCTTCAAAACCCTAGTATACATTCAATTTGGGACATGGGCCTAGACCT
GTTTCGTCACCATATAGCAATGAATACACTTGTCCAGACTCGTACAGTAGATGGCCTCTT
ATTACTTATTGAACGTGAGCGAGGAGGTGATTCAGTAGATATATCTTTGCTGAAGAGTCT
TCTACGTATGCTCTCTGATCTACAAATATATCAGGAAGCATTTGAGCATAAATTCCTTCA
AGCAACTGAAAGGCTGTACGCTGCAGAAGGACAACGTTTGATGAGGGAACTGGCAGTTCC
TGAATACCTTGCCCACGTAGAGAAAAGACTTAAAGAGGAGAATGATCGCCTTTTACATTA
TCTGGACCCATCAACCAAATGGCAACTGGTGGTGGTAGTAGAGAGACAGTTGCTGGGTGA
ACACGTGGCCGGGATACTCGGTAAGGGCCTGGCTGCATTGTTGGACGCACCACGACTGCA
TGACCTGGCCACACTCTACACACTGTTCTCCAGGGTTAAGGATGGCCTGGCTGAACTTTG
TCATCATTTCAATGGTTACATCAAGAAAAAAGGAAGAACGATAGTAATAGAGCCAGAGCG
AGACAAGACAATGGTAACCGAGCTACTCGACTTCAAAGAACAACTGGACCATGTAGTCAA
CACTTGCTTCCAGAGAAATGACAAATTCATATACTCTATGAGAGAAGCCTTTGAATTCTT
TATTAATCAGAGGCAGAACAAACCTGCTGAATTAATTGCCAAATTTGTGGATCTAAAATT
GAGGGCCGGTAATAAAGAAGCAACTGAAGAAGAATTAGAACGTCTGCTAGACAAGATAAT
GGTTTTGTTCCGTTTCATACACGGCAAGGATGTTTTTGAAGCTTTCTATAAAAAGGATCT
AGCAAAGAGATTGCTAGTAGGTAAATCTGCATCGGTGGACGCTGAGAAGTCGATGCTTAG
TAAACTGAAGCAAGAGTGCGGAGGTGGCTTCACCTGTAAACTAGAAGGAATGTTCAAAGA
TATGGAGCTATCTAAAGATATCAATATTACATATAAGCAGCACCTGTCAGCTAGTACGGA
GACGAGCGGTCCTGGCGGCGTGGAGCTGTCCGTTCACATCCTGACGATGGGCTTCTGGCC
GACGTACCGCGCCTGCGAGGTGCGGCTGCCCACGGAGCTGACGCGGCAGCAGGAACACTT
CACCAAGTTTTACCTCGCGAAGCACTCGGGTCGGAAACTGCACTGGCAACCCACGCTCGG
ACACTGCGTGCTCAGAGCTAACTTCGCACAGGGTAACAAAGAGCTACAGGTTTCGTTATT
CCAAGCTCTGGTCCTGTTATTGTTCAACGATGGAGACAATCTCTCTTTTGAAGACATTAA
GGTTTCCACCAATATAGAGGAGGGAGAGCTCCGCCGCACGCTGCAGTCCCTGGCGTGCGG
CAAGGCGCGCGTGCTGAGCAAGGCGCCGCGCGGTCGGGACGTGCAGGACCTCGACCACTT
CTCCTTCAATGCGGACTTCACCAACAAGCTGTTCCGGATCAAAATCAACCAGATACAGAT
GAAGGAGACGAGCGAGGAGCAGAAGGCGACGGAAGAGCGCGTGTTCCAAGACAGGCAGTA
CCAGATCGACGCGGCCATCGTCCGGGTCATGAAGATGAGGAAAGCGCTCTCGCACAACCT
CCTCATATCCGAACTGTACAACCAGCTCAAGTTTCCGGTTAAGCCCTCCGATTTAAAGAA
GCGCATAGAGTCCCTGATCGACCGCGACTACATGGAGCGCGACAAGGACAACCCGAACCA
GTACAACTACGTGGCGTAACAGCAGTCCAGCGACGTCGCTTTAACGAAAATATTATTTAT
TTAAAACGGTTATTGTGTCTGCGGGCACCTCCCTCCCAACCCCCCCATGCACGCCACCCG
CAGCGCGCACTCGCCGCGAGTGGTTAGCCAGGCCATACACAGCTCCAGTCAACAACTTCA
CTAATCTTTAGGAAATAATATATATGTATGTACATATTATATAAATAAATATAAAAATAA
CGTATTTTACGCACGACGGAATAACTATAATTCGTTTTCTCCTAAAGTCACAAACCGTAC
CGTTGTTTGTCCTGTGTGCCCCGCTTCTGACGATCCCGTTATGGCCTTTAGTCACTTTAG
TCATTGTGGTTGAAACTTTGAAGTGCAGAAGTTGTTCGCTGCGAGCTGTAATAAATTCCC
CCTATCGTTTGTGAATAATTTGATACTTCTGTCCGCTGAACGCATATAACGGTTGAAACA
GTTTCGAGTCGTGTCGTCCGTAACTGCTACTTCCAACGTCTTAAGTTTTTCAGCAAACCC
CGAAAAAGTGGTGAAAAGTGTGCAGCAAAAATGTTAAAAATACATTAATAATAAAACTTT
TTTTTACCTACATGTCTTTTATTGAACCGTTTCACTGAACCCGAAGGCAATAGTAGAATT
ATTTGCTTATTTTAATTTTTAAAACCTTTATATTATATTATTATGTCGTCACTAAATCAG
TTGTTGGCATTAGAATGGAACCAGCCCTAAATTAAGGATGTCACTTAAGACTACCACGGT
CCAAAATATTGTCAGAGTTTAGACGGGCCGCAAATGACTTATTTGTAAATTATTTTATAT
ACATTGGCTTATTAGATTATAATATATTTCGAATTTATATAGTAATTATTGTTGTGAGAT
TCGAAACGAATGTATGGAATGTCCAACCAACGTTAAGAACACAAACCTAACAGTTCAAAG
ACGACCGTGGTGTATGTTAACTGGTGCAGCGAGTACACCATAGATTAGGGTTGTCTAAAC
TACATTACAAAACACCTTTGCGGGCTAATTAACTACAAAAGCTGGAAATCATCTATTATA
AAATGTATCTGAATAAAAGTAAACATTGCAATCCACTCGGAACTATTTATTCATGTAAGA
TCCTCCCAAATGTACTTTGTTATCTAATTCAATACAAATAAAATACAGTTTACATAATAC
TATATTTACAGTTTATTCACATAAGATTCATGTTCATTTATTAATAACAAAACAAACAAA
AAAAAGCAAATATATTACAGTAAAAGTAAACGTCCAGATAGTACGACAATGAATTAAAAA
ATACATAACAATTTTAAAAATAGTTTTTTTTTCTGATTTCATGAGTCACAGAAAGAAGTA
AAACTGATATTACTGTCACTAGTTATATCTTTAATTTTATTAATTGATATTGAATGTCAT
ATTGTGATCACCATCAAAACCATTATTAATTTTTGTATTTTTTTAAGATAAAATAAGCTA
CTTTCCTTCCAAAATCCTTTACTAATTTCTGTAAAATATATAACTAATAGGGTTAAGCGT
ATATAACGATGCATATCAGGTTTTGCAACCCATACTATATGGACTTCTTGTTTGTGGATA
GATACAATCATTTATCCTAGTCTAGTTATTTGTATTCGATTATTCGTTTACAAGAAACGT
ATTGCGTTTAGACAATGGATAGATTAAGGAATCTAATCCACTTTCATTCGTTAAACAAAT
TATATTCTTGTAATCATTGACAAGTGATACCGGTGACGTTTTAGAGCCACCTGCGTCGGG
GATATGAGACATTTGATTTTCATTGCGTAGTGGATGGGTTACTTTCTGTCCAGTATCTTT
AGCACGGTGTCGAGGTGGTCCTTGTGGCAGTCCAGCTCGTCTATCAGCGCCGACGCGAGC
GTCTGTGGAGTTATCTCCATTTCCAGGTAGTCCTTGAGCAGGACCTGCGGCGGCACGGCG
CCCCCGTGTCGCAGCACGCGGTCCCGCAGGCGGCGGCCGGCGCGGCGCGCGAGCGGGTCG
GCCGCGAAGTGCGTGTTCCAGGCGGAGGAGGCGAGCGCGCGCGAGATGAGGTAGGAGTAG
TACTTGGCGCCGTAGCCGACCAGGTGGCTGAACCGGTGCTGCCACGCTGTGTTTTCGACA
TACGGAAGTCCATAATATTGTTTCTGGACTTCTTTCAGATCGTCCGTGGTGCGGCCCCCG
GGCGCTGCGGGCCGGTCGTGGTACTGCTGGTCCAGGGCTGAATAAAACACCTGCAGCTGC
ATCTCGCTGGCGGCGAACAGTCGCTTGGAGGCGCACAGGCGCTGCAGCGTGCGCTCCGGC
GCCGCCTGCCGCGTCTGGAAGTGCCGCGCGAACCTGCGCAGCACCTGCGGGTCGGCCGCG
AAGCACTCCATGAGCACGCTGGGCAGCTCGGCCAGGTCGGTGGGGCAGCGCGTGCCGGCC
ACGTGCTGGTGGGGCGCGCGGCCCAGCATGGAGTGCAGCGCGTGGCCCGCCTCGTGGAAC
AGGTTGTCCAGCGCGCCCGCGGACAGCAGCGCCGGCCCCGAGCGGTGCCCGCCGCTCAGC
GACAACATTATCACCACGATCGGGTTCTGGTAGGAGCCATCTGGTAACAGCTTCCCGCCC
TGTATAGTGAAGTGGCAGTCCTGATGCGGCTTCCCGGGCCGCTCGTACAGGTCGCAGTAG
ATGTGGCCCAGCAGCCCCTCCGACTCGTGGACCACGGCCAGCTTGTATACGTCCGGAGAC
CACGACTCGCCTGGCAACATTTCCTCGGACTTCAGACTGATGCCGTATAGCTCTTGACAC
AACATATCCAAGCCCTCCATGCACGCGCCCAGACTGAAGTACGGACTGAAGTCCGAATTG
GCCTGGTCCAATAACAAGTTCTTCGCCTTGTGAGTATAGTACGGCGTGTCCCAGCAGTTT
AATTGGTCCAGATATGGCGTTTCCTGTTTCTTCATCTTCAGCATCACGTCGAAGTCCATT
CTAGCGCGGTCGTGGAGGCCGTCAGAGAGGAGGTCGAGAAACTGCCGCACGTTTGCTGCT
GTCTCCATTGTACTCGCTTTTATTGCTCTGTCGGCGTAGGTCTGGAAGCCGCAGAGCGTG
GCCATGTGGTGCCTGGCCTGCAGCACGGCGTCCAGCAGGCGGTCCTGCGTGCCGTCCGGC
GCTAGGTACAGTCGGTAGGCAGCCTCGCGGGCGGCCGCCTCCCCGCACTCCGCGTACACC
CCGCTCACTATTATATTGTCACCTTCGGTGCTGAAGAAATGTCTAACATTCTGAGGTACA
GCACTTCGAGAAACACGTCTTGGTTTAGCAGCTCCGGCCATGAACCTCTGCCCAGTTTGG
AGGATAACATCATTGAGAGCCACCACACTCTTCCTTTTGTTCTCTTCGAGGTGTATTCCG
CTCTGTTCAAAGTCGAACAAGAATAATTCTGCTAAATGTTTGTCTCCAGATGTTCCATTC
TCAACTGACTTCTTTAAAGCTTCGTACAAGCCTTTGTGCGTGTTTAACTTTTCGACAACT
CCACTAATGCTGATACAGGCTTCTTCAGCAGCTCGTGCGAAATGTGGTTGGGGGTGAGCT
ATCCTCACAAACTCAGCAAGATCTGCAACTTTGCACAGTGTGTCGGAAAGCTCATCAAAT
ATCTCGACCATAGGACGCGTGGGGCTGTTGGTGGCCTCTTCTATCAGACGATCAGTTGCT
TCGATAGCCTGGTCCTTGAGCGTGTAGAAGCCTTCAAAAGTTGTGAGCTCTGGTTTATTG
AAGAGGCCAGTTCTTTCCTTTAAAGAGTCAAAAATAGGTCTGGAATTTGGTCTGGTGTTG
AATGCTGTTGCCAAAGGTGACCAAGTACTGACAGAGCATCCCAATTTCTTCTTTCTGCCA
TTTCGGAGGATCCAGAGGGGTTTCAATAACTTCATTGTAGCTTTCACGTTACAATTGTTA
CATTACACTCAATTTGAAAAGGTGTCAATTTTAGAAAAAATGACAACTTGTCACACGACG
ATTTCAATTTTTTAATTGAGCAGTTAAAGGTATAAAGACCTGTGGCGTTTTATTATGCGT
AAGCCGGAACGCACGAGATGTGGGAAAAAGGATATAGTCTGTGACACATTACCTTTTTAC
CGCCAAATATGAAAAAC
(6737 bp)

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