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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN31306_c1_g1_i9
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_RBBP6_[Bombyx_mori]
Ontology
GO:0001701 P in utero embryonic development
GO:0003676 F nucleic acid binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006260 P DNA replication
GO:0006275 P regulation of DNA replication
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0035264 P multicellular organism growth
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048568 P embryonic organ development
GO:0061053 P somite development
GO:0061630 F ubiquitin protein ligase activity
Transcript
Level		FPKM:2.21 TPM:1.23
ORF EntryO_BomoIG12777_complete:A_BomoIG_DN31306_c1_g1_i9
Sequence
(Nucleotide)
TTTTCTTCTTTGATTTCAACCGGCTTCTCAATTCTTAGTAAATTGGATACTTCATTTTGT
TTTTCTATGGCGTCTTTCACATCACTTTTCTCAGGATCCTCATCTTCTTTTTTAACGTCT
TTGTCCTTCTTTTCTTTCTTATCCCGCTTTTTCTTCTTTTCGATATCTTTCTCTTTTTCT
TTTTCCCTTTTTTTCTTCTTCCGCTCTTTGAGCTTTTTCTCTTTTTCTTTATGATCTTTA
CTTCTATCAGCGGAAGTCTTGTCACGAGTTCTATCTTCTTTCTTCTCGCGTCTATCGCGC
TCGCGATCCCTAGATCGACCTCTTGATTCACTGCGTTTTTTATCGCGCGAGTCCCGATGT
TTTGGAGAAGTTCTAGTTTTCTTGTCAGGAGTTTTTTCGTGATCGCGAGCTCTTTCAGAC
TCTCTATTTCTTTCAATTTCGCGACGATCATCACGCGTTTCTCTACTCTTGTCATACCCC
GGTCTTCTATCAGAATTACGAATACGATCATTCCTTTCAGGAGGATCTCGATTATCAGCG
TATCTATCTCTCTCTCGTCCTTCTCTGTCTCTGTGTCTTTCATGTTCAATATTAGGGTCA
CGCCTAGGTCCAATTCTACTACGAACATTAGAGCGATACCCAGGTCGATTAGGCACAATA
TTATCGTCTCTATAAGTATCACGAAAGTTTGATTCATGATGAACATTAGACTCAGGACTA
GATTGTCTAAACGGAGGCACGCCATCACGGAAGTTGTTATGAGGTGGATTATCTCTAAAT
GTGTTATCTCTATACGGAGCACTCCTATAAGAGTTATCACGAAATGGTGCAGCACCCCTG
TAATTAGGATCTCTAAAAGGAGGGGGTTGTGATCCTGATTCTCTATAAGGAGGCCCGTCC
CTAAAAGGTACTGAACCTTGATCACGATAAGGTCCTGGTCTAAAATTATCTCGATAGCGA
GATTGTTCACCAACGTGTACTGGAATTTCTGTAGGACCAACGGCTATTGGTATGTCTCTA
AAGGGAGGTGGGCCTTCGACGTAAGCTGGAGGTCTATACGAGTCTCTGTAATTTGGATGT
GGTAATCTTTCACGATCAAGTCCAACTGGTGGTCCAAAAGACGGTTTCTCAAAAGGCGAT
GGTTCAAATCCTGGTACAGGTGGCTCCAGACCAGGAGGAATGTCTTCAAATGGTGGCATG
TCATAACGCCCTCGATAGCCAGGTGGTTGATCAGCTTGAATCGGGATACCGCCCATGGGA
GCTATTGTTTTCACACCTATAGGTGGATATGATGGTGGTGGAATACTATTTCTAGGTCCG
TATCTGGCTCCATACGGCGGCTCTACGCTACGTCTCGGGGGGGACATTAGTTCGTCGTAT
ACTCCGGCATATCTGTGCGGTGAGGATCTCGGTGGCGGCGGCGAACGTCGCGGCGTGCGG
CGTGGGGACCGCACCGGCGAGCGGAGCGGGGAGCGGATCGGCGAGCGTAGCGGCGAGCGG
GGCGGCGACCGCAGAGGGGGCGAACGGTACCGTATGGGAGACCGCATGCGACGCCGGGGG
GACGGCGACCTCGTTAGCGAGAGAGAACGGCTGCGCGTGCGGCGTCTTCTTGGCGACCAC
GGTGAACGTCGCAAGCGGCCGCGCGACATCGAACGCGACCTAGAGTACCGCGGGCGGCTG
GAGGCGCGGCTGCGGGCGCGAACGCGCGGCGTGCGTGAGCGCGTGCGGGTGCGCGTGCGA
GAACGGGAGCGAGAGCGAGACGGAGACAGCTCGCGGCGCCGCTCCTCCTCACGCCGCTTG
GCTCGCATCTCCTTCTCGCGTATCATCCGGTTGAAAGCCTCCAGCGGATCCTCACCCGGC
CTGTTAGAAGGCGACTCTTTGATACCGGGTGGAGGTGGTTGATACGGTTCAGGAGGAAAA
CGCTCAACAAATCCAGGACCGGGCGGCGGACCGAATCGCGGTGGATCGTTAAAACGTTGA
GGTGGTTGCGATGCTCCATGAGCGAACGGGTGAGGACCTCGATTGTACGGAATCTGAGAA
GACATTGGATCTCTTCGTTCCATTGGTTCTCTTCGTTCATCTATTGTTGGAGTGCTAGCC
CTTTGTTCTTCAATTCTAGGTAAATTGAGTGGTATGGATGAATTTGGATTTTCGACAACT
GGTTTTATCATCGGTTGATGGCCGACAGAGGCTGTGACTTGCGGTTTAACGGGTCCATTC
GGTGGAGGTTGTTGTACACTCGATGCAGTGGTTGCCTCTTTTATCGGAGCACGGGCTTGA
GCTGGCGTGACCGAGGGTCGATGAGGTGCTCGCCGGCTGTATCCAGTTTGATTGCGAAAA
GACGACACAGAGTTCCTCAAGAATCTGTTTGGAATAAGTGTTGTTGGAGATATTTCTTTT
TCCCGACAGTCGGGACATTCATGATCCTCAGATTCCAGTAACGCACCTCTTATGCATTCA
TCACAAAAAGAGTTTCCACAGCACGGTATCATTACAGCGTCGGTGAGAAGATCGCGACAC
AGACTACAAATTAGTTCATCCGGTATGGTTGGTTCGGGAGCGCTGGGTGCGCTACCAGAT
GGATCACCAGCACAGTTCTCAGAGGCCATATAAGCCTCATGATCTACGGCAGGCACTGCA
AAGGTTCCACTCGGAGTCATCATGGCGCCCGGTGCCTTTGGTCCTTCAACAGGTACCATA
AAACTACGAGGAATACCTGTACTCCGTCGTATTTCCACTGGCTCGCCTGAGTTTGCAGCA
GGACAATCTTTTATCCAGTGTCCTCGCTTTTGACACTTATAACAAATGTAATTAGATGGC
ACTGCCCCTCTCTGATTTTGTCCTCTTATTTTCTGATAATTGCTAGGGTCGTAGTCAAAT
GTTGATTGTGATATCATAGCATTTATTTTATCCTGTTCGCTACCTTCCATGCGAGATAGA
TCAGCCAGTCCTTTATTAACAGTAACATCTTTATGTGGAGCTGAATTACTATTTGAGCCT
TCCCACTGCTTCTTTGGTTGTTGAGAAAGTGGAACTCTGGCAACCAGGAGAGATGTATTC
TTTGGAATCAAAGCATTGTCATCAACATATATCTCTTTGGTTTGAGCATTAGTGATTTCT
AAATCAAAGTCCGAAGTTTTGCCAATGCGTTTTTGCTGAGATATTGCAGCTTTCAGGTCA
CCTACAGATATGTGAAGACCGTCGAATGTAACCGTGTCATAATCCAATGCACTTTTGAAT
TTATAGTGCACAGACATTTCCAAAATGAAAAAAAAGCAAAGAAAATGTAGAATGGATGTT
ACAAAACATAGCCGTTCACGTGTTACATGCAAGCTAAATCAAGAAAGTTTACAACTAAAC
AATATAAAGATCCCGACTATTTTGACACATTCATAATCAACTAGATGGTTTGTATTGATC
GAATTTAAATACGGTATTACTTAAACTATTTAATATGCACTATATATTGTAAGCAACAGA
ACTTATTCTCTTGAACTTTTAAGTACAAACATTCAAGATCCGGCGTCCGCAGATCGGAAG
AGTACACGTCTGAACT
(3556 bp)

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