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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN31302_c2_g2_i1
Scaffold_idBomo_Chr2
NCBI non-redundant
(nr)		UBX_domain-containing_protein_4_[Bombyx_mori]
Ontology
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006986 P response to unfolded protein
GO:0016020 C membrane
GO:0030433 P ubiquitin-dependent ERAD pathway
Transcript
Level		FPKM:5.17 TPM:2.88
ORF EntryO_BomoIG12063_complete:A_BomoIG_DN31302_c2_g2_i1
Sequence
(Nucleotide)
TTTTTTTTTTTAAACTTTAAGTGTTTTAATAATACATACAACCACAAAGTCGGAAGTGCC
TCTAGCTAACAGCAGAATTCACAACTTTAATGCTATAAATTTAAGGTTTACATTTATTTT
CATAAAAAAAAAATACTAATCACGACAACCGATAATATGTTGTTGCTCTCAATTCCACAA
AACTACAGTAAAATTACAATTTTTTGATTATTTTATTTATTTAAATATGACTTATTATAT
TATTATGTGATAAATATGATTTCTACAATTATTATTAACATCATTATTATGTTTCGCATA
AGGAAAGAAAGAAAGAGAGAAACAAAGATAGAAAGAAAGAAGATATCTTCTCAACATCAT
TCTCATACCTGCGTGTGAACAACGAACAAACAGACAATTATTTAGAATAGTGATATAAAC
CTGGTCTGGTCTCCACAACACCATCTTATGATATTAATTAACATTGATAACAATAAATGA
ACAAATATTTCAGTAAAATATACATTTTAATGTCGATTTAAGAAGAATCCGATCGCGTCA
TTGCTTAAAATCGCTTTTGCCTTATTTTTCGTATTTTTGAGGGTAGATTTAAAATTTTGA
TTACCGCGATTTTTATTTTAAAAAAAAAAGCCACAGGGACAGAAAAAGGGATAGCGTTCA
CTAGAATAAGATCAAGATTGATTTGCCACATTCAAACTTGTATTAGTGGACATCTTTCAG
CTGGGCTCCAGTCGAGATTTATCTTTGACAGAATATTAATTACAAAACTAATTGAATGTG
GGATCAAAATAAGGGCAGGATTGGTCAGAGGTTGGGCCGGGGGGCGGGCCCCCCTCACCC
CCCGTCCATATCAAAACATCGGGTTCAAAAGCATTGATGTTGTATACTTAAATCTTCATA
TAACACTCAGATGTCAGGGGGGTCGATGACCTGTGAGGACACGCAGTGATGAGGGTAGCA
AATATCACCATTGGGGGCAATTAAAAAAAAATTTTGCAACCATATTAACTACTAGATATA
TGAGGTACAAATATTCAATTCAAATTTCAAAGTTATTACGGCTAATGTTACTGAATTTTC
ACCTTTATTTCAAAGACAAAAGAAGCTGTTTCACGGGCCCACACAGTCTGAGGCTATCGT
AGGTCGAAGGTACCGGAATGATCAGCTTTGATGAGTGAAGGGAGCCATGATGCCGTGGAG
ATCACGAGCTTCAGACAAACTCTAGGATATGTTTGTGCTCGGGGGACCCTTAGTCCTGAG
CACCCTTGGAAGGCGTGGTCGGTTACATCTGCTGCGTTGAGTTACCGTTCCAGGTGTTGT
TGTCGTCGCTAGCCCCGGTGTCCCCGGGCAGACGGTGCACGTTCCCCCTCCGGCGCAGGC
CGGGGGGCGCCGCGCGGGAGGGAGAGTGGGGATCGGGGGAGCGCGGCGCCGCCGGGGGGA
ACAGCCTAGATCTGATCCACTGGTAGACCTGCTGGCTCGGCTCCAGCACGAGGGTCGAGA
ACAGGCTCGAGAAGAATGCGAGCAGCGAGGCGAAGGAGGAAGTGAGTGCGGGCGCGGGGG
GTGCGGCGCGCACGGGCAGCACCAGCACGGCGCCCGACGGGACCAGCCCCTGCGCCGCCA
GGGACTCCGCCCCCGCCGTCAGCTCGCGCCGCGGGAACGCCGTCCACAGCGTGAAGCTGG
ACGGCTGCAGCTGTGCGCTGCGGCTGACGTGCGCGCGCAGGTCCTCCACGGTGGCGTCGG
CCGCGAACTGCGCCGAGTGCGAGGAGCCGTCGGGCAGCTTGAACTGCACGCGCGCCCCCG
CGCCGTCCCCCCCTGTTCCCGGCAGTTGCGCGGGGGGCGCGGGCTTGGGGTCTGGGGGCG
CGGGGGCGAGGTCCCGGGCGCGCCTCTCGGCCCGGTCCTGCGCTATCTGCTGCAGGATCC
GCTGCCGGGCGAGCTCGTTTTCAAGCTTCTCCCGTTTCCTCTCTTCTTGTATCTGCTTCA
GTTCCTGTTCCGCTTGCCACTTCTTGAGTTCCGTGACCCCTTTGCCGGTGGCGCGTCGTT
CTATCTCCCTCTGCTTTTCGAGCTCCTTCTCTTTCTCCTCTTTCTCTCTGCGTCTCGCTT
CTATCAGTAGCTTGGTGCGTTCCAACTTGTCTTCTATTTCGGTCAAGGTCTCCATCCCCG
AAGGTTTCTGCTGGTTGGCCTCGCTGTCCGTCGGCTCGGGCGATTCGTCCGCCGGTGAGG
CGGAGTCGTCCGCTGGGGGGGCAGAGTCCCGGCTGGGCCCCGGCTTGTCGTGCTTAGGCC
TGGGCACGCGCACGCATATCTCATCGCCGCAGACTAACTCGTAGTTATCAGACTCCGAAT
ATTCGTCTAATACTTTGATGAAGGCATCTGAATGATCATTAATCTTCGGATTTTCTTGCC
GATGTTCCGCTAGTATCCTATCGATCCTCGCGGACAGATTGTCGGCGTCCACACCAGCGC
AGACCACTTCGAGAGGAGTACCATTCCTGCCGATGAAGAATAATGACGGCACCGGCACGA
TTTGATCTGAATTCGATTTAAGGATGAACGTGTGAAGATCCAAAGCCTTAAGTTGAGTGA
ACGTCCGTTGACGTCGCAGTGTGAGTGGTGCCATAAATGACTTTTTTTTTAAAAGGGATT
TTATGACCTGATAATTAAGACCTTTAAGTCATGTCTTATTTTTATTTATATTCATAAATT
(2700 bp)

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