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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN30799_c6_g1_i1
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		repressor_splicing_factor_1_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0001178 P regulation of transcriptional start site selection at RNA polymerase II promoter
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0010468 P regulation of gene expression
GO:0031440 P regulation of mRNA 3'-end processing
GO:0048025 P negative regulation of mRNA splicing, via spliceosome
Transcript
Level		FPKM:0.86 TPM:0.48
ORF EntryO_BomoIG102287_complete:A_BomoIG_DN30799_c6_g1_i1
Sequence
(Nucleotide)
AATAAGTCATAATTTTTATTTATGAAGAAACTTATCCATTAGAGTACTAGGTAGAATGTT
AATTAATTTCTGAAGATTGTTCTTGAAATATATTCCGATGATTTTGAAGCGAGATCACCG
AGTCCAAGGAACTGAAATTTTAAAAATATCTTTAGATGAAATATAACTGAGAGTGCTGTT
AAAATACTGTAAGATGTTTACTTGTTTTAATGTCTGAACAGACTTCAATTTGGTCTCAGG
GAAATGGAATTTTATTAGTTGCAGCTTATTTGAATAAAATTACACAGAAAACAAGATAAC
TTTTGTACCAGTCAAGCAAACTTTATAAAATTGAGAGTCAATTTAAATGATGTTATACGT
TATAGTTGATATTACACTTGCTAGTTTGTAGCAAAGTAAAATCATATTTCTTCTTGTTAC
ATTATGAGTTTCTCCAGAAAAAAATTGAAAATTATTAACATGTAAAAAATATGACTGTCT
TCGTGCTGAGGAACAATGATTACAGTCAAACAATAACTTGTAATGGAGAATATGATAAGA
GGTCATTTACTTTAAAGAGCACTAAATACTTTTTTTTATCTTGTGTGATTAAGGTCCTTG
CAGTTAATGGTTATTATGGTTCAAATTAAATCATTTTTATAATACAAGAAATATCAAAGC
TAGAGCTACCACAAGAGTAATTATTCTTTAAAAAATATACATGTACGTTTATGACACTTG
CCTTTAAAGTTTTTTTGATTCTACATAATCCATACAGCACGTTTGTCTAATCAGCAAGAC
TAAGCGTGTAATCAATCATCACCATAATTATAACAAGAAATTTTAAATATATTTACCTCC
ACTTCCTTGAGCCATCGAAATGCCTAGCAATAAACCCCCAGTATTCATTGAATTTTAACA
CTTGGAAGGCTTCAGATTACGATAACACTAAACCTATTTAACCTAGCAACTAAATTAATA
ACGGGACAGCGGCGACCTAGATCTGTAGTTGCCGCCACCGCCGCCACCACCACCGCCGCC
GCTGGAGCCATATCCGTCTCCGTTACGATTGTACGGCCGGCCGCCGCCGCCACCGTATGA
GTTGTTGAACCTGCCTCCTCCCTGACCTCCGAATGAACGACCACCCCTGAAGTTACCGCC
GCCCCGACCTCTGAACCCACCTCTGCGGGGCCCGTCCCGCTTTCTAGAGATCTCTACTTT
CAAAGTGGCGCCTAACATCTCAGTACCATTCATCGCGCTACACGCATCTTCCGCCTCCTG
CAAGTTCTCAAATTCTATGAAAGCGAAACCTGGGGGATTTAGTGCTACCCAAACTGAGTT
TAGTTTTCCATATTTATCGAACTCGCGTTCGAGATCTTCCTTCTTGATTCCCTCGACGAG
ACCGCCGACGTACACGCGAGTACCACCCGAACTCATGGTTTAGTATTATTTATGAAGATA
CAACTAAAATTTATTTATGTGAATAAAAATTAACGATTTTGACTTATTTTAAACACATTT
ATGAATAAAAATTAAAGAGACGATTACTGAACCGATGGAGACTATTTTCGAGTGAACGAG
(1560 bp)

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