SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN30786_c1_g4_i1
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		vacuolar_protein_sorting-associated_protein_52_homolog_[Bombyx_mori]
Ontology
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0010008 C endosome membrane
GO:0010668 P ectodermal cell differentiation
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0019905 F syntaxin binding
GO:0032456 P endocytic recycling
GO:0048471 C perinuclear region of cytoplasm
GO:0048611 P embryonic ectodermal digestive tract development
GO:0055037 C recycling endosome
GO:1990745 C EARP complex
Transcript
Level		FPKM:0.35 TPM:0.19
ORF EntryO_BomoIG101824_complete:A_BomoIG_DN30786_c1_g4_i1
Sequence
(Nucleotide)
GTCATGAGTAGTGTCACTGTTTCAGTGCTTTAAATTGTTTAAAACAACAAAAAAAATTAA
ATACAAAACCTAAAAATTCAAGTAAAATGTATGTGAATAGTTGAAAACGCACACAGTCAA
GTATAAATGTTGATTTCCCGTCATTCCACTAGAGTTTAATCATGTCTGATAACAACAACA
TGAACTTAGACAAAAATCTTGAGGATTTCGAAATCCAAGAGGTTCTCCGTAATGGTACAG
ATTTGCGAGAATATGCTCTTCAAATCGACAAAGGAATCATCGAAGCTGAAAAAGCATCTG
TTGCGGATTATTTGAGAGAAAGTGAGAATATTGGCTCCCTTCATAATCAAATCGAAGAAT
GTGACAATATTTTAGGGAAAATGGAGAGTATGCTACTGGTGTTTCAGAATGATTTAGGAA
GCATCAGCAATGAAATTATAAGTTTACAAAAGCGTTCAGTGAATATGTCAGTACAGTTAT
CTAATAGACAAGTGCTTAAGGGACCTTTATCTGCATTCATAGAAGACATGGCAGTGTCGG
AAACTGTTATATTTGGTATCAACAATGTTCCAGTTACCGACAAAGAATTCATGGTGCAGT
TGGCAATTTTAAACCAAAAATTAAATTTTGTAAAGGAACAAGATTTCAAAGAAACTAAAG
CTTGTCATGATGTCAAAGACGTTTTGGAAAAATTAAAGATAAAAGCAGTGTCAAAGATAA
GAACATATATTTTAGAACAAATATATAAATTCAGAAAACCAATGGCAAATTATCAAATAC
CACAAAATGCCATGCTGAAATACAAATTTTTCTTTGAATTTGTATTGACCAATGAACGAA
ATGTGGCTCAAGAAATTTGCAATGAATATATTGATACATTGAGCAAAGTTTATTATTCAT
ACTTCAAGTCATATGCATCAAGACTAGATAAATTGAAATATGAAGAAGCACCCAACAAAG
ATGACTTAATGGGAATTGAGGATGGATCTAAAGGAGGATTCTTCCAGAAATCTAATTTAA
AAAATAAAAGTACAATATTCACTATAGGGAATAGAGGTGATGTTCTGGCCCAACAACTAG
AAGCACCCATTATTGTACCACATGTTCAGCAAAAAACAAAGTATTCATATGAAGCCTTAT
TTAGAAGTCTTCAATATGCCTTGGTAGACAATGGTTGCAGAGAATATCTGTTTACCACTG
AATTCTTCCATGTCAAAGGAAACCATGCACAAGAGCTCTTTGATAGAATCCTCGGTAAAA
CATTGTCCGTGCTTGTAAAAAATGTGGAAAACTATGTAGTTGAATGTTATGATTGTTTGG
CACTATTTCTTTGTATCCAATTAATAAACAGATATAAGTTAATGTGCCATAAAAGAGCAG
TTGCGGCTCTGGACAGGTGAGAATTCATATTAAGAAATGTATCGACACTGACAAACCTTC
ATTTAGAAGGGTAAGAGCTAATATGGCAAAGAGTAAATAAATATAGGGTTAATCAGCCCT
GAGGCGACACTTGTATGTCATGTTCGACCCACCATAAACCCACTCAGTCCTCAAGTCTCA
TCTTGACTTTAGTGTTTGGTTGAAACTTACTTCTGCTTAACATAACAGTTCTATGTTTGA
GTTTGTAGTTTTCCTTATCTTAAACCCAATGCTGAT
(1656 bp)

- SilkBase 1999-2023 -