SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN30759_c4_g1_i8
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		uridine_phosphorylase_1_isoform_X3_[Bombyx_mori]
Ontology
GO:0003824 F catalytic activity
GO:0004850 F uridine phosphorylase activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006218 P uridine catabolic process
GO:0006220 P pyrimidine nucleotide metabolic process
GO:0009116 P nucleoside metabolic process
GO:0009166 P nucleotide catabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016763 F pentosyltransferase activity
GO:0042149 P cellular response to glucose starvation
GO:0043097 P pyrimidine nucleoside salvage
GO:0044206 P UMP salvage
GO:0046108 P uridine metabolic process
GO:0046135 P pyrimidine nucleoside catabolic process
Transcript
Level		FPKM:10.02 TPM:5.58
ORF EntryO_BomoIG101347_complete:A_BomoIG_DN30759_c4_g1_i8
Sequence
(Nucleotide)
GCGCGCTTTGATGTCTGTTAAAAAACCGGCACAGCTTGGAAAACCACGAATGCAGCGAAA
TCTTTGCATAATCATTTGCAAATGTGGTCCTACACTTGCGGGTTTGCGTATTCGTGCGAA
TGTGAGTGACCGGTGTTAGAAGCTGCTCGCGCCATATAATTCCAGAGTACGCGGAACGAC
AGCCGTGGAGTTACATGTGGCCAAGTCCATATTCTAGCAAGTAGCAACACTCGTGCAATA
TAAATAACAACATTACAGTACATGTGTGGAAGCACATCAAATCAATGATATCAATATGAA
CATTAGTTTTGTCATCAGCGATTTAGTATTTTAGTGGATACTTATACTTTTTTGGAAATA
TTAATATTCACTACATTATGTACACAAAATTTTATATTAAACTACTGCATTTGGTCGAAA
TATTTCGTTGATAAATACGTATTAAACAGTCGCATTAAAGATACTTTTAGTACATTAATA
ACACTGTTATTCATTGAATTATCGTAGGTTTATGAGGCTGTTAGAAGCAAGCTGTAAAAA
GTTTTATTCATAATGTGATCTATACTTTCACAGACAGACTTCTTATAAACGGACTCAGAA
ACCTCCAATAACTAATTGTGAATAAGAGAGTTGATAATTACGTTAATATAATAATAACAT
TTTACAAATTACCTTCGCTGGAGACAAAATTCAATGTCACGCCCTTAATATTACAACGTT
GTCCAACGATTCACACATTCTACTTTTAATAACTGTGCGACAACAAATCTTCAGAAAATA
CATAATTTCAAAACTTGAGAACAAACAGATATGTACGTACAGTTTTTGACACACAAGACA
CAAACTTGTTTAAAATTTATAAATCTTAACCATCCTTATTGTTTTTCAATAGCAATTTTT
TTTCTAATCAACATTTGTAAGGAACAAGAGCATAAATACACTGAAATTAAAATATCTGAC
GATATTTACAATCGGGATTAGTATAGGTGCTAACTTGTCAATCAAAATAAATAAATTATT
AGTGCGTACTGGTTCCGCCATTGACGTCAACAAAAAGTTCTAGACGCAAAAGTACCTATG
CTTTAAAACATTCAAATGAAATAGTTGCAAAATAACTATAAATACAATATCCAATCGATC
AATCAACTAATTTAAAATCTATTTAAAACTTTTTCATGACAGTGGTCATATGTAAATATT
TATTTAAAAAAAGGATTTGCTTAATAATATTTTGTATTGAAATTAAATAGATCATCACTT
TAAACCACAAATCAAATTAAAATGACTTCATAAGATTGATAATAAGTAATGTATTCGATT
CGGGAAACAAAAGAAATTTACTAATTTAAACAATAAAATTTAATAAATATGTACTGCGAT
TATGAAATTTAGCAGTCAAGTTTTCAAAGAGTAAAACAAATAAAATAAAATAATGGAGAG
TAAGGTTTTGTAACAATTTACGATGTTAAGAATAAGAGCATTTGTAGAACATAAAAAAAC
ATAATATATTTAATGATATTTGAAAATTTGACATTTTCGGTCTACATAGGCCTTCTTGTT
TTTTGGTATATACTAATTACAACACGCCAAATAAATATATTCAATCATTAACCAAGTAGA
CATTGGAACAATCTCGAACATCAAAATATAGCCCGTATCGTCAAGCATCGACAGCTCGTC
ATCTACTTGCGTTATGATAAAATAAATAGTAGAGATATAAACAATTTACTGAGATATTTA
TTTGCGATACAATTTCAAGATCAGGTCAACACATTATTATTTAATGTTTCGAATAATTCT
TGGAAGTCCGCTAAATTACCGACTTTTCAAGACAATACGATATATTTTTGGGAAGCATTC
ATCAACAAATACATCTCAGTTACTATTTTTTTTTTTTTTATAAAACTTAGCTTGCACTGA
TTCAAGTTAATTCAGCGCAGCGCAGCGGGCTTATGCAATACAAGAACCAGAACCAATATT
AATGGACCATTTGAAATATTAAAAATTTTAAGGACCCCACAAAATTACTGTAACAAAGAT
TTCAGCTTTTTCATGTACTAACATTTCTGCTGTTGAAACAAAGACATACATTTTTTATTC
TGGCAAGATCTTGATAATATTTTATGCAAACGACTAAAATGTATTCGTGGCCGTAACGAT
TCGATGAACAGTGTTACAGTTTTAATCATATGTCTCAGATTCCTGCTGCACAAGCTTGAA
TCGACGGGGACTCTTCACGGCAATGGAACCGTGACCATCTAAAGAGATTTTTCCCTTCAC
CTGAAGATACCTTTTAATGTAACGGCAAACAAGCTTCGTGGGACGCTGTTGCCACTCATC
CAAAACTTCTTTAGGAGCTAAAACCTGATCACCCTTCAATCTGTCTAAAACAGTAACGCA
GACGACAGCTGCCTTAATGCCCGCGTGATGAGTGAGGGCGGCGAAAGAGAGGGACTCCAT
CTCAATGTTAACAACGCCGGCTTTGTGGATGCTCTCTAAGTACTCCATCTTATCAGTTTC
GGTGAAATCACAAAAGGCACCATCTAAACGACCTTGTCCTTCATAGAAATCGTACGTGCA
CATTGTTTTGCCGGTCACGGTGTCGTAGGGGTCTTCGGGATCGGCCAGTGCTTTCAGCTC
CCTAACTAATCGCCGATCCAGTTTCGCTGGACGCTGAACTATTTTTCCTAAAACTGTCAG
TTCTAGAACATTCCTCAGGGCTCCATCGACGGCTTCATCGGAAATAACAACCGTACCGCC
TTCGTAGCCTATACCACCACATGTTCCGATTCTGAAGAACACAGGATCACGGACTTTCGC
GTGGTACATCAACTTTATGACTTCGTGAAGCAGGATTCCGACAGAAGGTATGCCCATACC
GTGCTGAAATTATTTCATAGCAGGAACTTTAACATTAAAATAATTTTAAATATTAATTCT
TAAAATCTATCTATACTTAATATTATAAAAAGGAAAGATTTGTTTGTTTGTTTGTATTGA
ATAGGCTCCGTAACTACTGAACCGATTTGGA
(3031 bp)

- SilkBase 1999-2023 -