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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN30751_c4_g1_i1
Scaffold_idBomo_Chr3
NCBI non-redundant
(nr)		U5_small_nuclear_ribonucleoprotein_40_kDa_protein_[Bombyx_mori]
Ontology
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000398 P mRNA splicing, via spliceosome
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005682 C U5 snRNP
GO:0005732 C sno(s)RNA-containing ribonucleoprotein complex
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0044822 F RNA binding
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:1.68 TPM:0.94
ORF EntryO_BomoIG101469_complete:A_BomoIG_DN30751_c4_g1_i1
Sequence
(Nucleotide)
GGCTATTTTCCTTTTGCCTATACAATTGTCAAATGAAACAAGCTAAACAGTCCTTATACC
ATTTTTAAGGTTAGTATTTCTGTTTGTAGCTATAAAAACAAATAGGTAAATAAACATCTT
AAAAAATGCCAGATATAGAAACTAAAAGAAAAGCAGAGGATGTGTCTCTTGTACCCTCCA
AGCGAGTACGGCATGAGATCTCAGTAGTCGGCACCAGAGAAAAGGCAGTTGTTACTTCAT
CTGTTCCACGAACATCAAACTTGTATGCGCCAATTATGTTGTTGGAAGGACACCAAGGAG
AAATTTTCACAGGCAAATTTCATCCTGAAGGCAAACATTTGGCTTCTGCAGGCTTTGACA
GACAAATATTAATATGGAATGTGTATGGTCAATGCGAGAATGTGATGGTGATGAAAGGTC
ACACGGGAGCAATAATGCAGCTTTGCTTCTCACCTGATGGTTCACATTTGTACACTGGAG
CTACGGACAATACTGTAGCAGTATGGGACGTACCCACCGGGACTAGAATCAAGAAGTTAA
AGGGTCACGCTAACTTTGTGAACTCTGTTTCAGGAGCAAGAAGAGGTCCAGAACTCTTAG
TTTCAGCTTCAGATGATAACACCATAAAATTATGGGATGCAAGGAAAAGGAATCCAGTTG
CATCGTTTGACAGTTCATATCCAGTCACAAGTGTACTCTTCAATGATACAGCTGAAAAAA
TTTTATCCAGCGGTGTGGACAATGTCATCAAAATGTGGGATATAAGGAATAATCAGATTT
CCTTGAAAATAAAAGGACATACAGACACGGTTACAGGATTATCATTGTCATGGGATGGTG
CATATCTCCTGTCCAATTCAATGGATAATACACTCCGTATTTGGGACGTTAGACCGTTTG
CACCAACAGAACGCTGTGTCAAATTAATGTCTGGCCACCAACACAACTTTGAGAAAAATC
TGCTCAGATGTGCATGGTCTCAGGATGGCTCCAAGGTTAGTAGTTCACTCGTCTTGAAAA
AAAGTACTCTAACATTTATATTTTCCTAATAGCCATTGTCTTAGTAGACTCCCCAATGTT
GAAACTACTGCCGGGCGAAGTCAGACTTCTTTTGTAATATTTCTAGTTGTACCTTCAGAG
CGGAACTGAAGGTAACTGCATCAAATGAACCTAGCTATTGTCAAATATTCTTAAAATATA
CAATGAGCTGTAGAACTCCGTGAGTACCTTAAGTTTTATAATTTATTTATTCCCTATATG
CCCCATACCAGGTGACAGTAATGTTGTATACCTTGCACAAAATATATGTCTCATCTAAAT
CATACAGTATTCATACAATAATTAGGTAGGCAGAGGCTTGGCTCTGCCCCTTGCATTGCT
GAAGTCCATGGACGACGGTAACCACTCACCA
(1411 bp)

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