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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN30746_c4_g5_i2
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		synoviolin-like_protein_[Bombyx_mori]
Ontology
GO:0000836 C Hrd1p ubiquitin ligase complex
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0018279 P protein N-linked glycosylation via asparagine
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
Transcript
Level		FPKM:19.29 TPM:10.74
ORF EntryO_BomoIG100764_complete:A_BomoIG_DN30746_c4_g5_i2
Sequence
(Nucleotide)
TTCATTAGAACAATCCGTATTTGCCTGCGGGATTCGAACACCGGCATAGTCACATCGCTT
GATACGAATGCACCGAGCCATCTATCTTTTAGGCCACGACGACTTACAACCAAAACAACC
ATTTCAATAAGATTCCTTCACTAGTTATGACATTTCACTAATTTCTTCCATTCCCCAAAA
TTAATTATTTTATCAGAGTTATATTAACGTTAAATCCAGTATGTCAAGGTTGTGCTTTGA
ACACTTAACGCCCACATTACAAATATTACCTTTTAGTCTCTTTCCGAACCATTCAAAGTA
TTCACAGCATATTATAAACATTTTGAAGTTTAATTTGAATAATAATTTATTTATGAGTCA
TGTTAAACCATTCTCAATTAGGTGACACAAGTTTAGTGTTACTTAATAAAACAAGATTCA
AATAGTATTTTAACTTTTCAGGAGGATGTCAAAGACCTGCCAGAGCCGATATTCGTCAAT
TGTATTCAAACGGATGGACAACTATATCATTTCGGAGTATTACAACTTAACACTTTGAAT
GTTGATGGTAATGAAGGCATAAAAAATGTATGGTACTGCAAAAACAACATGAAACTCTAT
GATTCAAGCAGATACTTTAGTGGCATGCCGGTCCTCGAAAATTATAACAACAAAGTCTAT
GGATATATAAATGCGTTTTATAATAGTTAATTCTGTAATATTTAATAAATAGTCTAGTTT
AAAGAAAATAAATAATTGTTTCACTTTGATTTATTTTGGCAACATTAAGCATTGATAGGG
TTACCAAGAAAAATAGTATGTAATGTATTTATGTATTCATTATATTTACAGAACATAAAT
ACGACTCCATAATCATAACCGATCAAGAATACACAATGCTTACACATATCAAGACACTTT
GTACATAAATAATGTAATAATGAAAATCAATGATAGTCTCAAACATAATAATACAAAATA
TGCTTCATTTATCCAAGGTAAACTTTTGCAGTCGACGTCTTCTCAACTCCTCGGTGTCGG
CGTCAGTCTTGACTCTATCGGAATCAGTTGCGTCGGACAACTCCTCAGGTTTGATTTCCT
GTTTGCTGGTCGACGGCACCGGAGATGGCGACCTGTACTCAGATGTACTGGGGACTACAT
CAGGTTCAGTTTTTACTTTAACTTCAGAGACAGGGTCGGGTTGAGTTTCGGTTTGTGTGG
CAACACTAACGTTATTCTGAGCAGAGTTAGCGACGACTGTAGAGTACTGCTGCATGAGGA
GAACAGAAGCGTCCAGCATGGCCTGGATCTCGCGTAGCAGCTGTAATCTAGCCTCAATGT
TCCGACGTTCGTTACCCTCCATACGTTGCAGCTCGGCAGTAGTGAGTACGGCGAGGTTGG
CGGGTCGCGGTGGCGGCGGCGGGGGCCACGCCATCAATGGTGGTGGAGGCGGCATGTTGG
GGAAGGGCGGC
(1451 bp)

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