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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN30739_c0_g1_i4
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		THO_complex_subunit_2_isoform_X2_[Bombyx_mori]
Ontology
GO:0000346 C transcription export complex
GO:0000347 C THO complex
GO:0000445 C THO complex part of transcription export complex
GO:0000784 C chromosome, telomeric region
GO:0000902 P cell morphogenesis
GO:0001824 P blastocyst development
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0008380 P RNA splicing
GO:0010468 P regulation of gene expression
GO:0010793 P regulation of mRNA export from nucleus
GO:0016607 C nuclear speck
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0017145 P stem cell division
GO:0046784 P viral mRNA export from host cell nucleus
GO:0048666 P neuron development
GO:0048699 P generation of neurons
GO:0051028 P mRNA transport
Transcript
Level		FPKM:0.16 TPM:0.09
ORF EntryO_BomoIG102409_complete:A_BomoIG_DN30739_c0_g1_i4
Sequence
(Nucleotide)
CCACTCTTCTGTGTTATGATAGAGTTCATCATCGACTCCGCATCTCTCAAGTTCATGATG
ATAAAATATAAAATTAGAATTGTTTTGCGACATCACGTATTCGGTGATGTCTTGCACGGA
GGCGGAGGCGGCGCGGTACGGCACGTTCCTCTGCAAGGTGCTGACGACCGCCATGCGCTG
GCACGCCGACAAGGACGCCTTCCACCGAGAGTGCGCGCACTACCCCGGCTTCGTCACCAA
GTACCGCGTCTCCAAGCAGTTCACTGAAGCTAATGATCATGTCGGATATGAAAACTACAG
GCACGTGTGCCACAAATGGCATTATAAAATAACCAAAGCAATGGTTGTTTGCTTGGATTC
AGGCGACTACGTGCAAATACGTAACGCCCTCATAGTTCTAATAAGAGTCTTACCTCATTT
TCCTGTTCTGGCTAAGCTAAGTCAAATTATCGAAAAGAAAATTGATAAGGTTAAGGAACA
AGAGAAAATACAAAGACAAGATCTTTATGTGTTAGCAACGGTCTACAGTGGACAGCTACG
GAACAAGTCCTCGAATATGATGAATGAAGCTGATTTCCATCAGATGAGCGACAAGCACAA
AGCGGCGAGCACCGCGGCCGCCAGCGCTGCGCCCGCCAAAGAAGAAGTGGTCGCAGATCC
TGAACCCGCCCCTGCACCCGCGCCCCCACCACAAGAAAGTGAAAAACGGGACTCGCGCAA
TAGCGACCGCCGCCGAGACGAAGCGGACCGAGATAAAGATTCCAAAAGAGAATCAAAAAC
CTCCACAAAGGAAAGGTCTAAAGAAGAAACCCGAATTAAAGATAGATCACCCAAAGAACG
TTTACAGAGGGAAAGCAATTATTTAGAAGCAATCTCACCGCCACACGAACATCGCAGCAC
TTCAGATGATGTCGAACGAGATATAAAGCGACGTAAAGTTGAAAACAGCAGTAACGGCAA
GGTGAGTATTGTGATAATAAACCGGCCTTGCATCGTGCACGTCCCGGACTGAGGATTGGG
CTGGACCTCGACCACAAACCAGACTGAAATTATCTAACAACAATCAATAACAATTCAAGA
CAATCAATATTAAAGGAGAAACAAGTGATACATTTAAGACTTAAAGTGCACAATATAATA
ATAAAACAACCAAATTAAATAATAGAAATCGATTTAAAAACTAAACAAAATAAATTTCTT
GAAAAACGAAGAATTTCTAAATAGCGGAAACAAGCAATTGTGATGAAACTGAATTACATA
ATACTCTGCCTACAATTAATATTTTGGCGGCTTGAAGAATTCAAAGCGAAAAATAAATGA
AATTATCGTCAAGTTTGTTCGTCATTTATCTTCAAATTGTTAATAATGGTGACAACACGC
AGTCAGCTAGCTACGCAACACCGAAGCATTGCTCTTGGAACGGTTTGAGGCATCGAAGAC
AACTAAACGAGCGGCAGCGTGGCTACCTCGATGGACCCGTGTGATTCAAAGAATTCAAGA
GAAACTCACCAGTGTGAATAAACTAACACACGGACAATCGCTAATGAACAATTCAAATAC
AAAGTGAAGCAGTAAAGTTGTGAGTCGTAAGTCCATTAAGCCCAGTCCCTGCATCATGAT
GAGGTATTCATCAGACGACATCTGCGTAAGTCAAAAGGTTCACTGAATTAAGTACAACTT
TGCGTAGTGTTGCCAATAAACTTACTCCATCTTCAAATAAACGAGGAACAAATTGGTGAA
AATCAAATAACGGTGAATTCGACGAAATCTGCTGAAGAGTTATCGAAACAAATCAACCAC
AAGCAGTAATAGAACATCCAAACGATATTAATGAAGAAACTTGCAATAGGCAGGCGATTC
GTAAGCCCAGTTTTAGTCAAGCAAATCGGACAGTTATATCTGCAAGATCGTGCAAACTTC
AGGTTGTTTCAACAAGACCAATGCTCCATATACCAATTTCCGAAGAAACTAATAATACTG
TAAACTTTCGTCTACTAACCAATGTTAAACAAAAATTCTCACTAATCCAACTTTCAAGTA
ATATTATTTAAACAATAAATTACCAACTATTGGAGAACCATCACCTTTAAAAATAGATCA
ATGAAGACGTCAAGTTTGCAAGACCGAAGAAAAATAAAACAAGAGACAACGGAACAATGA
AAAAAACAAACACAAAATGAGCTGTAAAACAATAATTATCGACACTGTGAAAATAAAAGT
GCACATTTCAAAATGAAGAAAACACAGTTCAAACAAAAACATGTATTCTGTAATCTTTGA
AATGTCTTATAAAGTACATATAAATAATAACGAAGAGCTTGTCTAAACAATTCTAATGAA
TAACGGACAGATGAGAAAAAATTGCAACTGAAGAAAAGTATTGAAACATGATAAAGTTGA
AGTTACTCCTTCAAAAGAAAAAAGTACGAGGCAAGAGACATCACATTGGAAATGGAACCC
GAAGAACTAAAAAACTGAAATTTAAGTTACATTGAAGATGATTTTTTTTAAATGAGTAAT
TTCTTGATGTTGGTCTTCATTCGGTGAGCCTTTTGTCTTACGGTCCGTAGATGTATTTAT
TTGGAATCGTTCACACGAATTATGTTATTTGACACTTTGCTCAGAGATTTAAACATTTTT
CTACGTAAGCAGGCTAGCAAAGAATTAGAAGAGCGATCTCCTGAAAAGGAAAAAAGGAAG
ACTAAAGTTAGAGGTGATGAACGCAAAGAGCGTAAGATGAACCGCAAGAGGGACAGAGCT
GAGGAATCTACAATTTTAGAACAAAAGAGACGCCGAGACGAACAAAAAGGTACAAAATAT
ATAGATTCAATTTTTTAATATAGATTATAACGAAAATTTTGGGATTAGACTAGCAGAATC
TAATAATCAATTTCCTCAAATGGAAAAAAAACTAATTTAGGTAAAAAAGGTACAAGTCTG
GGACAAAAAAAGCCATCAGAATATCTCCTGGAGAATGGAGAATTTATTTCGGAAGTAAAG
AATTGAGCTTTCATCTAGCTTAATGCTTAATGTATAATGATGTTTAAGAAATGCATTTCA
ATAAAGTTAAGCGATAATCGACTTCTGAACTTTTTTTTCTTTCTGAAGCGATACTTTTTA
GTGTTGAAAAATAATACCAAGTCATCTCATTAGAAACCAGATAATGACAACAAACCGTGT
CACACGGACGGCTTGGAAACGGCCGTTCTTAGACTAAGACGATCGCCTCTTTTAAAATCT
ATTCACTAAGGAGTTTGGTCTCTGGCAGCGTAAGTTAATAAAAAAAAAACTGTTATTATA
CCTAACCTAGTATGAAATCTTTTCCGTATCTTTGAGTGAAAATAATCGTTGTATCTATTG
CTTATATTATTTACAACCTTTTGTTGTAATTTACAGGAGCAATCAAGATGAGCGGTCATC
AGAATGGTTCTCAAGAAGATCACCATTACGACAAATACAAAAGGGTAAATTTCGTTGAAA
ATAATTAACGACAAACGTCATCCTCGTTTTGTATTACTTTGTATTTTTAACCAGGTCAGA
TTGGCAAACGAATTCTCAGTCCACGGCTCATAAAAAATACTGCTGTATTGAATTATTTTC
AATAATAGTACGCAGCTTTTATTTATTGACTTACGTTGGCGAAATCGCTCGTCAGACATT
GTTAATGTGGGAGGACAATCATAAGCACTCGTCAAACTTCACTAAGCTGTATAAGGTTTA
CGAATACAATAAATTACACCATACAAAGATGTGAC
(3755 bp)

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