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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN30739_c0_g1_i3
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		THO_complex_subunit_2_isoform_X1_[Bombyx_mori]
Ontology
GO:0000346 C transcription export complex
GO:0000347 C THO complex
GO:0000445 C THO complex part of transcription export complex
GO:0000784 C chromosome, telomeric region
GO:0000902 P cell morphogenesis
GO:0001824 P blastocyst development
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0008380 P RNA splicing
GO:0010468 P regulation of gene expression
GO:0010793 P regulation of mRNA export from nucleus
GO:0016607 C nuclear speck
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0017145 P stem cell division
GO:0046784 P viral mRNA export from host cell nucleus
GO:0048666 P neuron development
GO:0048699 P generation of neurons
GO:0051028 P mRNA transport
Transcript
Level		FPKM:0.04 TPM:0.02
ORF EntryO_BomoIG102408_complete:A_BomoIG_DN30739_c0_g1_i3
Sequence
(Nucleotide)
TTATCATTGGGAAACTAAGTAAGGAAAGGATTATCCATTTAGCATCTGATAGGTTTTAAT
TGCACCATTTGAAAATTCTAAAAGGAGATTCATCACCATTTATTGAGTTTACGCTCACCC
ACTCAATTTTGATTTTTTTATTAGGTCATTAGAATACTTAGAACTGCTCGCGGTCAAAAA
GATGATCCGTTACATTTTGAGGCACTAACCGTTTTGGATACCGCAATATTACCGGCTCTT
ACACTGATGGAAGGGAATTGTTGTATGGCTGAAGAGGTGTACACATTACTTAAGTTATAT
CCATATCAGTGCAGATACTGTCTCTATGCGCGTTGGAAAAATGAGGCTGGCGAACGAATA
CCTGCTCTCATTCGTGTCCGGGGGAACTCATTGCAGAAAATAAAACACATAATGAAACGA
GTATCCAAAGAGAATATCAAGCCCCAAGGTCGTCTCATCGGGAAACTGTCGCACGCCGCC
CCGGCCTTTCTGTTTGATTACGTGCTCTTGCAGATACAAACATACGACAATCTGATAGGA
CCAGTAGTAGAATCCATGAAATATTTGACGTCTCTATCTTTAGATGTTCTGGGATACTGT
TTAGTTGAGGCTTTAGGCTCTCGACGTTCGACGCCACCTGCGTGGCTACAAGCACTAGCC
TCGTTCGCCGGGGCAGCCTTCAAGAAACACAATATTGAGTTAACTGCTCTTTTGCAGTTT
GTTGCTAATCGACTCAAAGCTCAACAGAGTCAAGACCTGATAGTATTAAAAGAAATAGTA
CAAAAAATGGCCGGTATAGAAGCTGCTGAGGAAATGACACCCGAGCAGTTAGAGGCTATG
GCAGGAGGTGAACTACTTAAAGGAGAGGCTGGTTACTTTTCACAAGTGCGTAACACGAGA
CGCTCTTCTGCGCGACTGAAAGATGCCATAGTCGGAAACAACTTAGACATATCTCTTTGT
ATATTGGCGGCGCAACAGAGACATTGTTGTGTTTGGAAAGAATACGAAGATGACATTCAA
ATAAGTGGCGAACCTCCAGGGTCCCAGCTAAAGGTGGTGGGTAGATTGGCAGACCAATGT
CAGGATGCTCTGGTTCAGCTTGGTACATTCTTAGCATCGTCACATGCTCCCGATGAATAT
GCGGCGAGGCTGCCATCGTTACAGGAACTGCTGCGTGATTACCATGTAGATGCAGATGTC
GCATTCTTTTTGCATCGTCCAGTTATAAACCAAAAGATATCCGCCAAGTTGGAATCTTTA
CGTAAAGCATCGGACAGCAAATCGGATTCAATAGAGAAGATTATAGAAAGATACAATGTG
GCATCAAAGGAAGCCTTGGAGCCTATTGTATCGTCGATACAACCGATGCTGCCTGCGAGG
GTTTTAGAAGACATTTCGCCTGAGTTTTACGTTACATTCTGGTCATTATCCATGTACGAT
CTTCGAGTGCCGGTCGAAAGTTACGAGAGGGAAATAGAACGCTTAAAAACAGCAGCAGCT
AACGTCAGCAAGGATTCGTCTCAAGGAACCAAAGTTAAGAAAGAACAGGAACGTTTCAAT
ACGCTCATCGAAAAACTACAGGAGGAGCGGCGCCGACAGGCCGCGCACGTGGCGGCGGTG
CGGGCGCGGCTGGCGCGCGAGTGCGAGGACTGGTTCCCGGCGCGGGCGGTCCGCTCCGCC
AAGAACGAGACCGTGACGCGGCTCATGCAGCTGTGCATATTCCCGCGCTGCGTGTTCACG
GCGGCCGATGCCCTCTACTGCGCCGAGTTCGTGCATACCGTGCACTCTCTGAAGACTCCC
AATTTCTCCACTCTTCTGTGTTATGATAGATTGTTTTGCGACATCACGTATTCGGTGATG
TCTTGCACGGAGGCGGAGGCGGCGCGGTACGGCACGTTCCTCTGCAAGGTGCTGACGACC
GCCATGCGCTGGCACGCCGACAAGGACGCCTTCCACCGAGAGTGCGCGCACTACCCCGGC
TTCGTCACCAAGTACCGCGTCTCCAAGCAGTTCACTGAAGCTAATGATCATGTCGGATAT
GAAAACTACAGGCACGTGTGCCACAAATGGCATTATAAAATAACCAAAGCAATGGTTGTT
TGCTTGGATTCAGGCGACTACGTGCAAATACGTAACGCCCTCATAGTTCTAATAAGAGTC
TTACCTCATTTTCCTGTTCTGGCTAAGCTAAGTCAAATTATCGAAAAGAAAATTGATAAG
GTTAAGGAACAAGAGAAAATACAAAGACAAGATCTTTATGTGTTAGCAACGGTCTACAGT
GGACAGCTACGGAACAAGTCCTCGAATATGATGAATGAAGCTGATTTCCATCAGATGAGC
GACAAGCACAAAGCGGCGAGCACCGCGGCCGCCAGCGCTGCGCCCGCCAAAGAAGAAGTG
GTCGCAGATCCTGAACCCGCCCCTGCACCCGCGCCCCCACCACAAGAAAGTGAAAAACGG
GACTCGCGCAATAGCGACCGCCGCCGAGACGAAGCGGACCGAGATAAAGATTCCAAAAGA
GAATCAAAAACCTCCACAAAGGAAAGGTCTAAAGAAGAAACCCGAATTAAAGATAGATCA
CCCAAAGAACGTTTACAGAGGGAAAGCAATTATTTAGAAGCAATCTCACCGCCACACGAA
CATCGCAGCACTTCAGATGATGTCGAACGAGATATAAAGCGACGTAAAGTTGAAAACAGC
AGTAACGGCAAGGCTAGCAAAGAATTAGAAGAGCGATCTCCTGAAAAGGAAAAAAGGAAG
ACTAAAGTTAGAGGTGATGAACGCAAAGAGCGTAAGATGAACCGCAAGAGGGACAGAGCT
GAGGAATCTACAATTTTAGAACAAAAGAGACGCCGAGACGAACAAAAAGGAGCAATCAAG
ATGAGCGGTCATCAGAATGGTTCTCAAGAAGATCACCATTACGACAAATACAAAAGGGAG
AAATCACCATTCCGTGACCGTTCCCACGAAGAAGCCAGAGATAAACAATATCCTTTTCAA
AGAACAAAATAAATATTAAAAGAATAATATCTGAAGTACAGAATAAACTGGAGAATTGAT
AGATGTACTTAATGGCTTATACAGACAGGCCGCCATTATGGCTACTTATTATTAAAATAT
CACGTTAGGAATTTCGTAAAATACATTGCAAGCCACGATCATCACACGCGGCATACGATA
AAAGTGCCCAATTTAATGTAGAAAAACTAATCGGATTGAGAAACTAATGATATATGCATG
AGAGTAAGAACGAAGAAGGAATAAAATTTGGAAAAATAGTTTTTATGCGACCCAAATTAA
GAAACTCCTTTATAGAAAAATGATTAGCAGTCCAAGTTAATATGAAACTGCATTTATTTG
GAGCCCTTTTGAAAATAGGTTAAGGTTAAGTCGTACATAATCGGTAAAAGATAGGTTATA
AGTATACATATACTGTAAAAATATACAGAAAATATCAATATCAAGGTAAAAAGTCATGTT
AGATATGCATTGCTTGCGTGTAAAGCCCAAAGAATGTGGAATATATGACTATCGCAATTG
CCCTAATGAGCGGGTACTCAGATTGATGGGTAAGTGTTTGCCCCTGCACAAGGACACAAG
TCATGTTAGCGGTATCTAATAAATACTGCGAAATTTGAAGATATTATTATACTCCCATGG
CGAATGATGTGATTGAAGAACATTCTCGTAAAGTAACCAGCAGAACAGGGGTACATTTGG
AAATAGGGAAACTGACAATTCATTCCTCGGTGTTTCCTTTCACATATCTTTTTGCAAACG
AGTTTTGCGGTAAGTACTCAGTGGTTTGGCTGTGCCTCGAACATAACTAACATTCTTGAG
TGATGGTAACTCCTCACCATCAGATGGGCCGTAGTTGATAAAACTGATAAATTGAACATC
TGTAATGTTAATGTAAGACGATCTGCTTATAAGGCTCCTTAAGATATTCAGGGTGAAAGT
ATTGGTCTGTTGTCATTAGTTTTATTCATACTTTTGGCTGTAGAGCTTTGAAGTTCTGGA
AATCACAGTCTATGGGTATGTTTTAAACAGGTAGGTAAAAATACCCGAGGATTTTTTGCA
ACGACAATTAAAAATTAGAGGATTAGCTCTGGAAAATATCGAGGATAATGACACCATCTA
ACTAGGTTGTATCGTGTTAAAACGGTTTGTTGAGCTGAAGAACCTCTACATTTATTATAA
GTGATGCATCAAACCTCAAAAATCTAGCTCTACGTATAATGCGTTAGTCAGACCCTTGGC
GAGTATACATCTGATTCAAAGCGGTCACCACATTACGGAGGCAAGTTGATGTCTAACTCG
ATCTATGTACGTGCGTCTATAGTCTTTTAAAAGACTATAG
(4360 bp)

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