SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN30739_c0_g1_i14
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		THO_complex_subunit_2_isoform_X2_[Bombyx_mori]
Ontology
GO:0000346 C transcription export complex
GO:0000347 C THO complex
GO:0000445 C THO complex part of transcription export complex
GO:0000784 C chromosome, telomeric region
GO:0000902 P cell morphogenesis
GO:0001824 P blastocyst development
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0008380 P RNA splicing
GO:0010468 P regulation of gene expression
GO:0010793 P regulation of mRNA export from nucleus
GO:0016607 C nuclear speck
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0017145 P stem cell division
GO:0046784 P viral mRNA export from host cell nucleus
GO:0048666 P neuron development
GO:0048699 P generation of neurons
GO:0051028 P mRNA transport
Transcript
Level		FPKM:1.19 TPM:0.66
ORF EntryO_BomoIG102428_complete:A_BomoIG_DN30739_c0_g1_i14
Sequence
(Nucleotide)
GTGTGCTCTTCCGATCTTGGCGGTCGCGTGTCTAGTACCGCTGGAATAATTTACTTAAAA
CTATTAGATCGCCGTTTATTGTTACGATGGGATCCTACGCAAAATTCGTATCTGATTACT
GTAAAAACTGGGACAAATCTGGTCGAGAATTGTTCTTGAAACATTTGACGCAATTCACAA
AAGATGAACATAGGACTCCACTATTTTCAAAGTCTGGGAAAATGTCTGGATTTTCTCAAA
GTGTCTATGATTTTCTTCTTTGTGGCCTGAAAGGAAACCTTAAAAAAGATACCGTTTTAT
CCTTCTTAAGAGAAATAACTAATTTGCATGCAGATGTGCCATCAATAATATTGGATATCA
TATCAATTTTGGATGCTGAAACCAGCCTAGATGTACAAAGCGATGAGCGGGCTTATTTCT
GCTACATTGTGAGAGAGCTGGAGCCATTTATTTCTGATAAGTTACTAAAAGAAAGATTAG
AGATAGATACATTACAAGATGCTGGTACTCTTAAGAACAAAAACTTCTACACCAAATTCA
TAAAGATCAAGACTAAATTATACTACAAACAACGTAAATTTAACTTATTTCGAGAAGAAA
GTGAAGGATACTCAAAGTTAATAGTTGAATTAAACCAAGAAATAAATGAAGATACAGAAT
GGAAAAATTTGCTTGAAATAATTCAATCTCTTATTGGTTGTTTTAATTTGGATCCAAACA
GGGTACTTGACATAATTCTAGAATCGTTTGAAGCCCGACCACAATTAGATGCTCTTTTTA
TACCGCTTATTAAGAGTTACATGGCAGATCCTCATGTAATTTCTGAGGTTTTAGGTTTCA
AACTGAGTAATATGGAAATTCTTGATAACTATACAGAACCTCCACCGTTGATGACTGTAA
TTGCATTGCTTTTACAACATCAGGTTATATCATTAGATGACATCTATCCATGGCTTCGCC
CAGATGATGTGATAATAGCTAAACAAGCTGATAAAGAAATAAAAGCAGTTCAAGAATATA
TAAGAAAAATTAACATTGTGTCTACCAAAGGACCACAAACAAATGCCCCCACTGAATTTA
TAGAAGATAAAGCTGATCCGCAGGAATATTGGAGCAATCAAAAGCTAGTGTTATGTGAAA
CTTTATTGAGAGTCAATGCGTGGCGAGAGTTTGCCTCACTGTTTGCGCGTCTTCCCACTA
CTACGATGCCGCCAAGACCAGCAATAGCCCTTTGTGGGTTGCTGCATGCTGTTGTAGAAC
CATTGTATCGAAAGCAATGCCGAGTAGCTTCAAAAATACTCGGAAAACCAGTACCTCCAC
TTAAATCAAATTTAGCACCACCTAATTGTAAAACATTCGAAGACATGAAAGAAACAGTTA
TACCAGCCCTTATATTGCTTGGTCCAGCCCTTCATCATGACCCTGTCTTGATGTACAAAG
TCATTAGAATACTTAGAACTGCTCGCGGTCAAAAAGATGATCCGTTACATTTTGAGGCAC
TAACCGTTTTGGATACCGCAATATTACCGGCTCTTACACTGATGGAAGGGAATTGTTGTA
TGGCTGAAGAGGTGTACACATTACTTAAGTTATATCCATATCAGTGCAGATACTGTCTCT
ATGCGCGTTGGAAAAATGAGGCTGGCGAACGAATACCTGCTCTCATTCGTGTCCGGGGGA
ACTCATTGCAGAAAATAAAACACATAATGAAACGAGTATCCAAAGAGAATATCAAGCCCC
AAGGTCGTCTCATCGGGAAACTGTCGCACGCCGCCCCGGCCTTTCTGTTTGATTACGTGC
TCTTGCAGATACAAACATACGACAATCTGATAGGACCAGTAGTAGAATCCATGAAATATT
TGACGTCTCTATCTTTAGATGTTCTGGGATACTGTTTAGTTGAGGCTTTAGGCTCTCGAC
GTTCGACGCCACCTGCGTGGCTACAAGCACTAGCCTCGTTCGCCGGGGCAGCCTTCAAGA
AACACAATATTGAGTTAACTGCTCTTTTGCAGTTTGTTGCTAATCGACTCAAAGCTCAAC
AGAGTCAAGACCTGATAGTATTAAAAGAAATAGTACAAAAAATGGCCGGTATAGAAGCTG
CTGAGGAAATGACACCCGAGCAGTTAGAGGCTATGGCAGGAGGTGAACTACTTAAAGGAG
AGGCTGGTTACTTTTCACAAGTGCGTAACACGAGACGCTCTTCTGCGCGACTGAAAGATG
CCATAGTCGGAAACAACTTAGACATATCTCTTTGTATATTGGCGGCGCAACAGAGACATT
GTTGTGTTTGGAAAGAATACGAAGATGACATTCAAATAAGTGGCGAACCTCCAGGGTCCC
AGCTAAAGGTGGTGGGTAGATTGGCAGACCAATGTCAGGATGCTCTGGTTCAGCTTGGTA
CATTCTTAGCATCGTCACATGCTCCCGATGAATATGCGGCGAGGCTGCCATCGTTACAGG
AACTGCTGCGTGATTACCATGTAGATGCAGATGTCGCATTCTTTTTGCATCGTCCAGTTA
TAAACCAAAAGATATCCGCCAAGTTGGAATCTTTACGTAAAGCATCGGACAGCAAATCGG
ATTCAATAGAGAAGATTATAGAAAGATACAATGTGGCATCAAAGGAAGCCTTGGAGCCTA
TTGTATCGTCGATACAACCGATGCTGCCTGCGAGGGTTTTAGAAGACATTTCGCCTGAGT
TTTACGTTACATTCTGGTCATTATCCATGTACGATCTTCGAGTGCCGGTCGAAAGTTACG
AGAGGGAAATAGAACGCTTAAAAACAGCAGCAGCTAACGTCAGCAAGGATTCGTCTCAAG
GAACCAAAGTTAAGAAAGAACAGGAACGTTTCAATACGCTCATCGAAAAACTACAGGAGG
AGCGGCGCCGACAGGCCGCGCACGTGGCGGCGGTGCGGGCGCGGCTGGCGCGCGAGTGCG
AGGACTGGTTCCCGGCGCGGGCGGTCCGCTCCGCCAAGAACGAGACCGTGACGCGGCTCA
TGCAGCTGTGCATATTCCCGCGCTGCGTGTTCACGGCGGCCGATGCCCTCTACTGCGCCG
AGTTCGTGCATACCGTGCACTCTCTGAAGACTCCCAATTTCTCCACTCTTCTGTGTTATG
ATAGATTGTTTTGCGACATCACGTATTCGGTGATGTCTTGCACGGAGGCGGAGGCGGCGC
GGTACGGCACGTTCCTCTGCAAGGTGCTGACGACCGCCATGCGCTGGCACGCCGACAAGG
ACGCCTTCCACCGAGAGTGCGCGCACTACCCCGGCTTCGTCACCAAGTACCGCGTCTCCA
AGCAGTTCACTGAAGCTAATGATCATGTCGGATATGAAAACTACAGGCACGTGTGCCACA
AATGGCATTATAAAATAACCAAAGCAATGGTTGTTTGCTTGGATTCAGGCGACTACGTGC
AAATACGTAACGCCCTCATAGTTCTAATAAGAGTCTTACCTCATTTTCCTGTTCTGGCTA
AGCTAAGTCAAATTATCGAAAAGAAAATTGATAAGGTTAAGGAACAAGAGAAAATACAAA
GACAAGATCTTTATGTGTTAGCAACGGTCTACAGTGGACAGCTACGGAACAAGTCCTCGA
ATATGATGAATGAAGCTGATTTCCATCAGATGAGCGACAAGCACAAAGCGGCGAGCACCG
CGGCCGCCAGCGCTGCGCCCGCCAAAGAAGAAGTGGTCGCAGATCCTGAACCCGCCCCTG
CACCCGCGCCCCCACCACAAGAAAGTGAAAAACGGGACTCGCGCAATAGCGACCGCCGCC
GAGACGAAGCGGACCGAGATAAAGATTCCAAAAGAGAATCAAAAACCTCCACAAAGGAAA
GGTCTAAAGAAGAAACCCGAATTAAAGATAGATCACCCAAAGAACGTTTACAGAGGGAAA
GCAATTATTTAGAAGCAATCTCACCGCCACACGAACATCGCAGCACTTCAGATGATGTCG
AACGAGATATAAAGCGACGTAAAGTTGAAAACAGCAGTAACGGCAAGGTGAGTATTGTGA
TAATAAACCGGCCTTGCATCGTGCACGTCCCGGACTGAGGATTGGGCTGGACCTCGACCA
CAAACCAGACTGAAATTATCTAACAACAATCAATAACAATTCAAGACAATCAATATTAAA
GGAGAAACAAGTGATACATTTAAGACTTAAAGTGCACAATATAATAATAAAACAACCAAA
TTAAATAATAGAAATCGATTTAAAAACTAAACAAAATAAATTTCTTGAAAAACGAAGAAT
TTCTAAATAGCGGAAACAAGCAATTGTGATGAAACTGAATTACATAATACTCTGCCTACA
ATTAATATTTTGGCGGCTTGAAGAATTCAAAGCGAAAAATAAATGAAATTATCGTCAAGT
TTGTTCGTCATTTATCTTCAAATTGTTAATAATGGTGACAACACGCAGTCAGCTAGCTAC
GCAACACCGAAGCATTGCTCTTGGAACGGTTTGAGGCATCGAAGACAACTAAACGAGCGG
CAGCGTGGCTACCTCGATGGACCCGTGTGATTCAAAGAATTCAAGAGAAACTCACCAGTG
TGAATAAACTAACACACGGACAATCGCTAATGAACAATTCAAATACAAAGTGAAGCAGTA
AAGTTGCTAGCAAAGAATTAGAAGAGCGATCTCCTGAAAAGGAAAAAAGGAAGACTAAAG
TTAGAGGTGATGAACGCAAAGAGCGTAAGATGAACCGCAAGAGGGACAGAGCTGAGGAAT
CTACAATTTTAGAACAAAAGAGACGCCGAGACGAACAAAAAGGTACAAAATATATAGATT
CAATTTTTTAATATAGATTATAACGAAAATTTTGGGATTAGACTAGCAGAATCTAATAAT
CAATTTCCTCAAATGGAAAAAAAACTAATTTAGGTAAAAAAGGTACAAGTCTGGGACAAA
AAAAGCCATCAGAATATCTCCTGGAGAATGGAGAATTTATTTCGGAAGTAAAGAATTGAG
CTTTCATCTAGCTTAATGCTTAATGTATAATGATGTTTAAGAAATGCATTTCAATAAAGT
TAAGCGATAATCGACTTCTGAACTTTTTTTTCTTTCTGAAGCGATACTTTTTAGTGTTGA
AAAATAATACCAAGTCATCTCATTAGAAACCAGATAATGACAACAAACCGTGTCACACGG
ACGGCTTGGAAACGGCCGTTCTTAGACTAAGACGATCGCCTCTTTTAAAATCTATTCACT
AAGGAGTTTGGTCTCTGGCAGCGTAAGTTAATAAAAAAAAAACTGTTATTATACCTAACC
TAGTATGAAATCTTTTCCGTATCTTTGAGTGAAAATAATCGTTGTATCTATTGCTTATAT
TATTTACAACCTTTTGTTGTAATTTACAGGAGCAATCAAGATGAGCGGTCATCAGAATGG
TTCTCAAGAAGATCACCATTACGACAAATACAAAAGGGAGAAATCACCATTCCGTGACCG
TTCCCACGAAGAAGCCAGAGATAAACATAGGCGCACTAATGAATCCAAGATAAGAAGATA
GAAGCTGCCTGCCATGATATGCAATCGTTGGACAATTGGAGAAAAGCCAACCTTCGCTGA
CAATATTGAATTATCTAAAGACATAATTGTATAAAATTAAGCGATGAAATAAATATTTTT
ATCAAAAAAAAAAA
(5654 bp)

- SilkBase 1999-2023 -