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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN30728_c4_g6_i1
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		peptidoglycan-recognition_protein_SC2_isoform_X1_[Bombyx_mori]
Ontology
GO:0002376 P immune system process
GO:0005576 C extracellular region
GO:0005887 C integral component of plasma membrane
GO:0006952 P defense response
GO:0006955 P immune response
GO:0008270 F zinc ion binding
GO:0008745 F N-acetylmuramoyl-L-alanine amidase activity
GO:0009253 P peptidoglycan catabolic process
GO:0016787 F hydrolase activity
GO:0042834 F peptidoglycan binding
GO:0045087 P innate immune response
GO:0045824 P negative regulation of innate immune response
GO:0046872 F metal ion binding
Transcript
Level		FPKM:1.95 TPM:1.09
ORF EntryO_BomoIG101520_complete:A_BomoIG_DN30728_c4_g6_i1
Sequence
(Nucleotide)
GGTTGATACTGGTGCTCTATAAGCCCACTGACTACACCGTCCTTTTTGTTGGTTATAATC
AGCAATAGATTCAGATTGGAAGGGAAGATAAATCAAATGCATTCGAACCGAATATCTCTC
GTTGAAATATGGATTAATAGTAATTAAATTTAAAAGGTTTTAAATTTTAGCTGATGAATA
ACAACGAAAGCAAAACAGACAGACCCTTGGACGAATGAAGGCTTCAATTCAGAAAGATAA
TACTATACTAGAGATCCGCCTTGGACTTGTAGCTAAATAGATAATTATTATAGTACGCAT
ACAGTACTTTAAGTCATAGTGTAGTAATAAACAATATCCTCTTATTAAAAATCTTGACTC
AATTTGCACATAGATAACTTCCACATTGACTTATTCCTTACTTTACTACTTAAGATACAA
TAATGAAGTAAAGAAAGTAACACCAAAACGTGTTTCGTTGGAACATCTTATTGTTTGCTT
ACATACCCGTATGCGCAGAAAGTTTTTCTGCTAGTTACTGATAAGATACTGTCACACGAG
TAAATTTTAAATGCCATTAATAGCCAACCTTAACCCCGGAGACAAAGACTGCTGTTTTCA
GAGCTCCAGTGCTTCAAATTATGTAGCTCACGTATAACGTTAGGTCCAGGACTTATAGTG
AGCGACGCTACCTGGCATTGGCCATACAAAGTGTAATCAGGTCGCAAGACTCCTTGTTTT
ACAAGTTGATCTAAGACGATATTTAAGTGTTCAAACTGTACAGGTGTCGTCTTATCCTTT
GTATAATCCCCGAGGAACATGATTAGTATGCTTCTGCGGTTCCAAGCTATCGCCATTGCA
CCGAACACATTAGCGCCTCTGCCTTCGAATACGATGCCGTTACCAGACACGAGGAAATTG
GGACCGATATCTTGCCATCCGCGATGCAAATGGCTTTTCTGCACATCCAACATTTCCTTA
ATACATTCGTACTTTTCAGTACAGTAGTTGGTAGCGCTGTGACCAACTATGACGAAGGAT
AGGGGTAAATCGAGGAAATCCACTGAGTATGGCGACATCGCTTGCCAGTCACTTCGACGA
AGATACCAGGGCTCGTGTATATCTAGATCGAGACGTGTGAGCTTGGATAGCGCGTAGTGG
GATATGTAGAAGCCCAGTCCTAATGTGACAATGAGCGTCCAGCAAACAAACACGGCGATA
CTACAGCGGAGTTTGCGTGTGCTCTTAGATGATATCAGCTCCTGACCGAGTATTTGGCCT
TTGATTTCTTCTGTATTCCTGACGGTTTGAGTTACTGATATGAACTTGGGTCCGATATGG
ACCCGTGACGACTTTGTTACATTGAGTTGTGATATAGGCGTCGAACTCGCAGCTTGCGTT
GCAACTGCCATTATTCTGTCGTCCACTACAGCTACGTCAGAGCTGATAGGAGGCGGGCTT
TTCGTCTCGTGTTTAGGATTTTCATCACCATCACTCTTCATGGCTAGCACTTAAAACAAA
ACAAGAAAAACACAACACACGCACACACATACACAGAAAACAATGGAATGACGCACCGAG
ATGATTAACCACTCAGACGACGGCTCTCTACGTTTTTCCGATCGCGACTAACTTCGTAGT
TCGTTTCTAATTTTCCGTAAAAATCAAGAATCGTAAGGAAGTCAGGATGTTTCTTTTTTG
AGTCCTTTTGGCCTTTTCATCTTCACATAGG
(1711 bp)

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