SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN30723_c0_g3_i1
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		39S_ribosomal_protein_L44,_mitochondrial_[Bombyx_mori]
Ontology
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004525 F ribonuclease III activity
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005840 C ribosome
GO:0006396 P RNA processing
GO:0016787 F hydrolase activity
GO:0030422 P production of siRNA involved in RNA interference
GO:0030529 C ribonucleoprotein complex
GO:0031053 P primary miRNA processing
GO:0031054 P pre-miRNA processing
GO:0044822 F RNA binding
GO:0070124 P mitochondrial translational initiation
GO:0070125 P mitochondrial translational elongation
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:8.31 TPM:4.63
ORF EntryO_BomoIG102351_5prime_partial:A_BomoIG_DN30723_c0_g3_i1
Sequence
(Nucleotide)
GTCTTTCCTAACAAAAACTGCTCTAAATACTATTTTGTATTATTACAAGATTTGCTTCTA
TTTTTTTATTTATAACATCAATAGAGTTTTATATATAATATAAACATATTAAAAAACTAC
AAAATAGTTACTGCAGCTAGTATGATGTCCTTAGTTCCCAGACTCAAGGAGATTTTAGCC
AGTCTGTCCTCATTTGTAAGATAATTTCTCACTTCATTCACTCCCTCTAATGGAAATTTC
GGTAAAACTGTCTCTAGGTAGAGCTGCACATATTCATTTATGAACTTTTCTCCTTCTGCA
ATCAACTCCATATTGTCCTTCATAGGAATATCTACTCCCATTTCTTTTTGTTTCATTTCT
TCCTTTATAATATAAGTTCTGTCAGTAAACGCTTGTAGTAACAAATCCGAGTCGAATTCT
TCATTCAAACGTTTTCCAAAAGCATAAAGTTCAGCCTCCAAATTCCATTCCAGAAAAGTG
TTACGGGGATTTGTTTTCTTTCCGCCTAACTTTTTTTCTCTCCTCTTTAATTCTACAAGC
GTAGGAGCTACCCATCGATGAATTTTTTGACTCTGTAAAGTCATAGGTGGTATTTTGATA
CACCTAGCAAAAAGCGGAGCACATCTTCTCATTAGTGCCATTTTAATTAGTTTTTGTTTC
AATGTATTTATTTCAATTTGAATGTTTTGTTTTTGTTGATAGGTTACTCCATAGATTATA
CCATAG
(726 bp)

- SilkBase 1999-2023 -