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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN30718_c1_g1_i7
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_regulator_of_nonsense_transcripts_2_[Bombyx_mori]
Ontology
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0001889 P liver development
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006406 P mRNA export from nucleus
GO:0031100 P animal organ regeneration
GO:0035145 C exon-exon junction complex
GO:0042162 F telomeric DNA binding
GO:0048471 C perinuclear region of cytoplasm
Transcript
Level		FPKM:12.65 TPM:7.05
ORF EntryO_BomoIG101585_complete:A_BomoIG_DN30718_c1_g1_i7
Sequence
(Nucleotide)
CTGCGGACCCTAGAATTAATACAGAGGATAGATATTTTTTTCGTTGCTTCATAGCGGTCT
CCTATTCTGACCTATTATGGATGATATGAGGTGAAGTTGCTTTATTTGAAACTTTAATCA
ATTGAGATGAAATTTAATGAAACGAGATGAAATGGGATGAAATAAAGTATTAGTAATTAT
ATTTATTATATTATGGTGGTTATTTACTGAAACTAGTGAACTTTTTGGCAGAACCCGAAA
GGCTACGAGGCTTTCATTTCATTTTCCCACATTCTGCACTTTCATAGATGCTAAACACTT
ACTAATCCACCGTTATTACACGCCTGCACGCACGCACACTTTGAACACACTAAATTAACA
AAAAAACTATTCAAAATAGTTCGCTCCTAGAGTTTCCGCCAGACTTATATTTTTCAGTGC
GTTAATTTAAATTTACACTTAAAAAATTTACAGTTTTGCGTAAAAAATTTGTTCCATTTG
AAAAAGAAAAAAAACCCTTTTTTTATTACATATATTATTACAATACATTACATACATTAG
TTTTTTATTTATTTAAATTTCTTAGGACCGAATATGAGATCGGCGTCCGGTGCCCCTTTG
GGATGTTGGTATTTCTGACGAACATGCTGACCTCTGTTAGGATTACCGATACCTCCCGAT
CCACCACCGCTCTCTGCGCTATATTCTTCTTCTTCTTGTCTTTCCGATATATTTAGAGTA
AGTCGTTTAACTCGTTCCATTTCTTGTTTATCAGCTAAAGCTTGTTGTTGTAGATTGCTG
GCCAATTCCGGTGGAGCACTGAACGATTTATATTGTGGTTTCGTTCCTTTACGAACCATA
AGAACGAATTCCACGCCCTCTTTTCCTTGCAAGAGCTGTTCATACGTCTTCTTCGTAGTC
TGTCTGCAGGTCATCGGGACAGCAATGTCGCGTTGTTGCGGTCTATTCTCCCGTTGTCTT
TCTGCAATATTTTCTGTTACCATTTTCTCGAATGCCGATTCGAACTCAACGTCTTCTACA
TGTTTAGTAGCAGGTCTTCGTGGCTCAATTGCCATTTCATCTTGCATTTCGTTTTCGTCA
TTAACATTATTTTCGGTAATCGGTTCTTCATCAGAGCTTTCATCAGGCAATTGCGGATTG
TCCGTTTCATCATCCGTTTCCATGATTGTGTCTAAGCCGTCGTTCACACTATCATCACCT
TGATCCTCATTATCGTACTCTTCCTCTCCTAGCTCCGGATATAAAGTCTGTCGTAGTTCA
TCTATTGCATCCTTACACTGTTGCCAGCTCGTAAACAAAGTCAACTTAGGGCGTAAAGTC
GTCAGGCATTCTTGATAAATATATTTAACGTAAATAGGGAATTGATAGTCTTTTGTCCAT
ATCGGATCAGAGAACTTGAACCAATAGTAATTTTGGAAGAAGGTCAAAAAATAGTCTAAT
CTTTTTTTGCTCGAACCACTGTTGAAGTATGCACCACAAGTCTCAAGCAGAGCGCAGACT
AGTCTTATTCTAAAAACATTATCAGATGGGTCCAATACAGATACACTGCTGTGATCATTG
GTGACACCAAATGTTATAAATGAATATAAAACAGTGAAAACATCTCGAGAATCTAATAAT
TTATAATTATAGAGTTCTCCGAGATACCGAACAGTAGCTATCCTTCTTTGATTATATCTT
GGATGTGGGTCTTCCATTGTTACCCTTATTTCTTCTAATATTGTGTCAACGACTGCTGGA
GCTACTACTTCTTGCCAGATTGCCAGTTCAGCTGTCAGTCTGGCCAGAGCCCTTCTGGCA
CTTGCTCTTACCCTCCAACCTCCTGCGAGATGTTGTATGGCAATGGCGGATACCTCTGGG
TCATCCCAATTCAGTTTTCGCATTAGTCTAAGAATTTTTTCCTCATTACTTTTCTGCAAG
TCTTCATGAAGTATTTTTCTGATAAATTGATGAAGTGGTGGCTCTTCTTCTTTAGGCTGA
ACAGGAGTTTCGGGAGGGCAAACGTAATAGAATGCGTTTTCTATCTGTGTTACATATCGC
GAATCTAGAGCTGAAACAGTTTTTTTTCGCATCATTTGCTGTAAATATATCATAGTCCTT
TGGTGTGTATCTGGATTACAGTATAAATATCTACCACACGTTTCAAGCAGATTGCAAGCC
ATCTCAATATGGTGATGCTTAAAATCATGCAGCAACACTTTCAAACAGTACAGCGCCTCC
ATTTTCGAATACAAATTAAACTTAACCAGTTCCCCAATGAATCGCACCACTTTTATCTTC
GATTCAATATTTATTTGATCCTTTTTCCTGACATGATACTTAAAGTCTTGTTTTAACATT
TGACACAGGTCAACACATACTTCTGGCAGTACTGGATATAAAATCGCAGCAAATCTTGAG
TAAAATGGCAACAGATCTAGCCTTGTTCTGGCAACACTGAAGAGAACTCTTGAAAGTTTC
TTCCGATTATTCTTTGTATTGAGATTCAGGATAAAATCAACTGCTGCATTATCTATGAGT
TCTCGGTTGATACAGTTGGGAAGTTCATTCAAAAATGTATCTAATCCATGTTTATTGGAA
ACATTTGGTGGTTGTATTTCTTCAGTTTCTACTTCTTGAACTACAGATGGGTCCTCATTG
TCACTTAATTCATCCTCCTTCAAATCTTCATCTAACATTTCTTCTGTTACCGTTTCAGTT
TTGCTTTTCACAGTCTCTTTCATTTGATAGTTAGGCATAAAAACTTTTAAGTCAGGCAAG
CATGTATAGAATGTTCTAGAATCTTCGTCCTGCCAAGGATCAGTACCGGCTTGCATAGTG
ATGTCTTCATTGCCACCAATGGTTACACTTCCTTGAGTCTCTATAACAGTCAGGGACAAA
GTGGGAGGTTCACCAGCTTCACCCAAATCTTCTCCAAGAACTTCAGCAAAATTTTGTGCA
TTTACTAGTAGCTTGTCATAAGTTGTTTGATGTTGTTCTAATTGTTCTTTTCTTTCTTGT
GAGAGTTCTCCTCTGGTGTGCAGAGTCCTCTGATTTGCTGCATGCAGAGCTTGAAGTTGA
GCTCTTTCCGCCAGCAGATGTTTGGTTAGTGAAAGAAAGTAATCTTTCAAGAGAGTTCTA
ACTGCTGTTTGTTTCTCTGCCGGTAAAAATGTATTTCGAGGAACAGGAATATTATGTTTC
TCAGAAGCTTCTCGTATTTTTCTAGGCATAAGTCCAGCATAATCATCACCACAGTGTTTG
CAAAATGATAACAAAATTGGTATATTGTTATGCTCTTCTTTGTCCATGTTTATTAGAACA
GTTAATACATTACCCAGCAAAGGCAATCCAGTTTTATTCATAAAAATACCGACAGCCACT
AATTCTGCATAAAATCTTATATCCACCCGCAGTTTTGATGAATTTGTTATTTTATCAGTC
GCTTTGAATGTTAAAATCTTTTGCCAGTTTTCAAAAAAGTTAGATGAAAAATCAGCGTAA
GTACGATGAAGAACTGAACATAGAGTTATAGCAGCAGGAATATCAGACATTTTCAATTTT
GCTTCTGCTATTGCAGCAGCCACTTCTGATATATATTTTGTAAGATTTAATGTTGCAAAA
TCTTTCAAAAGTACATCCAGCTGAGAAGCACTAAATGATTTTAGTTTTTTTACAAATGTG
GTATTCTTTTTCAAACCTGAATCTAGCTTGGAAAAATAATTTTCTGGTGGTCGAGAGCAA
TTCAAATTTTGATTACGTATTTCATATTTTTGTTTCAATCTGGCTTCCAAGTTAGCTGTA
TACTCTTCGAGAGCCGCTTTCTCATTTTCTTCTAAATCTTTAAGCGGTTCTTCAATAGGT
GTTTCGTTTGCCTCATCGTTGTTGGTGGCAGTCATTTTATCTTTTAGATAGGTATTATTT
GAAGCCAATGGACACCACTATATGGTGTGAGCAACTTTCTTTTGCATTTATTAACTCAGC
AAATCACATTTAATTCATTTAAAAATTTACAAACATTTGGGTAAGGTGTCATAAATATTA
TGTGTATTATCTTTTTTTTAAAGGGATTTTATGACCTGGTAACTAAGACCTTTAAG
(4076 bp)

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