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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN30718_c1_g1_i5
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_regulator_of_nonsense_transcripts_2_[Bombyx_mori]
Ontology
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0001889 P liver development
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006406 P mRNA export from nucleus
GO:0031100 P animal organ regeneration
GO:0035145 C exon-exon junction complex
GO:0042162 F telomeric DNA binding
GO:0048471 C perinuclear region of cytoplasm
Transcript
Level		FPKM:0.00 TPM:0.00
ORF EntryO_BomoIG101583_complete:A_BomoIG_DN30718_c1_g1_i5
Sequence
(Nucleotide)
CCCAGTTTTTCTTTTTCTGCAGTGGTTCCATTCCAACATGAAAGGCGAAGGTATCAAGCC
TAGCAGCCTAATCTGTTTAAATTTATTTTGTTTTATAAAAAATAATGTGGAGTGAAAAAT
TATAATATTATGGATGATATGAGGTGAAGTTGCTTTATTTGAAACTTTAATCAATTGAGA
TGAAATTTAATGAAACGAGATGAAATGGGATGAAATAAAGTATTAGTAATTATATTTATT
ATATTATGGTGGTTATTTACTGAAACTAGTGAACTTTTTGGCAGAACCCGAAAGGCTACG
AGGCTTTCATTTCATTTTCCCACATTCTGCACTTTCATAGATGCTAAACACTTACTAATC
CACCGTTATTACACGCCTGCACGCACGCACACTTTGAACACACTAAATTAACAAAAAAAC
TATTCAAAATAGTTCGCTCCTAGAGTTTCCGCCAGACTTATATTTTTCAGTGCGTTAATT
TAAATTTACACTTAAAAAATTTACAGTTTTGCGTAAAAAATTTGTTCCATTTGAAAAAGA
AAAAAAACCCTTTTTTTATTACATATATTATTACAATACATTACATACATTAGTTTTTTA
TTTATTTAAATTTCTTAGGACCGAATATGAGATCGGCGTCCGGTGCCCCTTTGGGATGTT
GGTATTTCTGACGAACATGCTGACCTCTGTTAGGATTACCGATACCTCCCGATCCACCAC
CGCTCTCTGCGCTATATTCTTCTTCTTCTTGTCTTTCCGATATATTTAGAGTAAGTCGTT
TAACTCGTTCCATTTCTTGTTTATCAGCTAAAGCTTGTTGTTGTAGATTGCTGGCCAATT
CCGGTGGAGCACTGAACGATTTATATTGTGGTTTCGTTCCTTTACGAACCATAAGAACGA
ATTCCACGCCCTCTTTTCCTTGCAAGAGCTGTTCATACGTCTTCTTCGTAGTCTGTCTGC
AGGTCATCGGGACAGCAATGTCGCGTTGTTGCGGTCTATTCTCCCGTTGTCTTTCTGCAA
TATTTTCTGTTACCATTTTCTCGAATGCCGATTCGAACTCAACGTCTTCTACATGTTTAG
TAGCAGGTCTTCGTGGCTCAATTGCCATTTCATCTTGCATTTCGTTTTCGTCATTAACAT
TATTTTCGGTAATCGGTTCTTCATCAGAGCTTTCATCAGGCAATTGCGGATTGTCCGTTT
CATCATCCGTTTCCATGATTGTGTCTAAGCCGTCGTTCACACTATCATCACCTTGATCCT
CATTATCGTACTCTTCCTCTCCTAGCTCCGGATATAAAGTCTGTCGTAGTTCATCTATTG
CATCCTTACACTGTTGCCAGCTCGTAAACAAAGTCAACTTAGGGCGTAAAGTCGTCAGGC
ATTCTTGATAAATATATTTAACGTAAATAGGGAATTGATAGTCTTTTGTCCATATCGGAT
CAGAGAACTTGAACCAATAGTAATTTTGGAAGAAGGTCAAAAAATAGTCTAATCTTTTTT
TGCTCGAACCACTGTTGAAGTATGCACCACAAGTCTCAAGCAGAGCGCAGACTAGTCTTA
TTCTAAAAACATTATCAGATGGGTCCAATACAGATACACTGCTGTGATCATTGGTGACAC
CAAATGTTATAAATGAATATAAAACAGTGAAAACATCTCGAGAATCTAATAATTTATAAT
TATAGAGTTCTCCGAGATACCGAACAGTAGCTATCCTTCTTTGATTATATCTTGGATGTG
GGTCTTCCATTGTTACCCTTATTTCTTCTAATATTGTGTCAACGACTGCTGGAGCTACTA
CTTCTTGCCAGATTGCCAGTTCAGCTGTCAGTCTGGCCAGAGCCCTTCTGGCACTTGCTC
TTACCCTCCAACCTCCTGCGAGATGTTGTATGGCAATGGCGGATACCTCTGGGTCATCCC
AATTCAGTTTTCGCATTAGTCTAAGAATTTTTTCCTCATTACTTTTCTGCAAGTCTTCAT
GAAGTATTTTTCTGATAAATTGATGAAGTGGTGGCTCTTCTTCTTTAGGCTGAACAGGAG
TTTCGGGAGGGCAAACGTAATAGAATGCGTTTTCTATCTGTGTTACATATCGCGAATCTA
GAGCTGAAACAGTTTTTTTTCGCATCATTTGCTGTAAATATATCATAGTCCTTTGGTGTG
TATCTGGATTACAGTATAAATATCTACCACACGTTTCAAGCAGATTGCAAGCCATCTCAA
TATGGTGATGCTTAAAATCATGCAGCAACACTTTCAAACAGTACAGCGCCTCCATTTTCG
AATACAAATTAAACTTAACCAGTTCCCCAATGAATCGCACCACTTTTATCTTCGATTCAA
TATTTATTTGATCCTTTTTCCTGACATGATACTTAAAGTCTTGTTTTAACATTTGACACA
GGTCAACACATACTTCTGGCAGTACTGGATATAAAATCGCAGCAAATCTTGAGTAAAATG
GCAACAGATCTAGCCTTGTTCTGGCAACACTGAAGAGAACTCTTGAAAGTTTCTTCCGAT
TATTCTTTGTATTGAGATTCAGGATAAAATCAACTGCTGCATTATCTATGAGTTCTCGGT
TGATACAGTTGGGAAGTTCATTCAAAAATGTATCTAATCCATGTTTATTGGAAACATTTG
GTGGTTGTATTTCTTCAGTTTCTACTTCTTGAACTACAGATGGGTCCTCATTGTCACTTA
ATTCATCCTCCTTCAAATCTTCATCTAACATTTCTTCTGTTACCGTTTCAGTTTTGCTTT
TCACAGTCTCTTTCATTTGATAGTTAGGCATAAAAACTTTTAAGTCAGGCAAGCATGTAT
AGAATGTTCTAGAATCTTCGTCCTGCCAAGGATCAGTACCGGCTTGCATAGTGATGTCTT
CATTGCCACCAATGGTTACACTTCCTTGAGTCTCTATAACAGTCAGGGACAAAGTGGGAG
GTTCACCAGCTTCACCCAAATCTTCTCCAAGAACTTCAGCAAAATTTTGTGCATTTACTA
GTAGCTTGTCATAAGTTGTTTGATGTTGTTCTAATTGTTCTTTTCTTTCTTGTGAGAGTT
CTCCTCTGGTGTGCAGAGTCCTCTGATTTGCTGCATGCAGAGCTTGAAGTTGAGCTCTTT
CCGCCAGCAGATGTTTGGTTAGTGAAAGAAAGTAATCTTTCAAGAGAGTTCTAACTGCTG
TTTGTTTCTCTGCCGGTAAAAATGTATTTCGAGGAACAGGAATATTATGTTTCTCAGAAG
CTTCTCGTATTTTTCTAGGCATAAGTCCAGCATAATCATCACCACAGTGTTTGCAAAATG
ATAACAAAATTGGTATATTGTTATGCTCTTCTTTGTCCATGTTTATTAGAACAGTTAATA
CATTACCCAGCAAAGGCAATCCAGTTTTATTCATAAAAATACCGACAGCCACTAATTCTG
CATAAAATCTTATATCCACCCGCAGTTTTGATGAATTTGTTATTTTATCAGTCGCTTTGA
ATGTTAAAATCTTTTGCCAGTTTTCAAAAAAGTTAGATGAAAAATCAGCGTAAGTACGAT
GAAGAACTGAACATAGAGTTATAGCAGCAGGAATATCAGACATTTTCAATTTTGCTTCTG
CTATTGCAGCAGCCACTTCTGATATATATTTTGTAAGATTTAATGTTGCAAAATCTTTCA
AAAGTACATCCAGCTGAGAAGCACTAAATGATTTTAGTTTTTTTACAAATGTGGTATTCT
TTTTCAAACCTGAATCTAGCTTGGAAAAATAATTTTCTGGTGGTCGAGAGCAATTCAAAT
TTTGATTACGTATTTCATATTTTTGTTTCAATCTGGCTTCCAAGTTAGCTGTATACTCTT
CGAGAGCCGCTTTCTCATTTTCTTCTAAATCTTTAAGCGGTTCTTCAATAGGTGTTTCGT
TTGCCTCATCGTTGTTGGTGGCAGTCATTTTATCTTTTAGATAGGTATTATTTGAAGCCA
ATGGACACCACTATATGGTGTGAGCAACTTTCTTTTGCATTTATTAACTCAGCAAATCAC
ATTTAATTCATTTAAAAATTTACAAACATTTGGGTAAGGTGTCATAAATATTATGTGTAT
TATCTTTTTTTTAAAGGGATTTTATGACCTGGTAACTAAGACCTTTAAG
(4129 bp)

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