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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN30718_c1_g1_i2
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_regulator_of_nonsense_transcripts_2_[Bombyx_mori]
Ontology
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006952 P defense response
GO:0009611 P response to wounding
GO:0009863 P salicylic acid mediated signaling pathway
GO:0009867 P jasmonic acid mediated signaling pathway
GO:0042742 P defense response to bacterium
GO:0048471 C perinuclear region of cytoplasm
GO:0048571 P long-day photoperiodism
Transcript
Level		FPKM:0.00 TPM:0.00
ORF EntryO_BomoIG101581_complete:A_BomoIG_DN30718_c1_g1_i2
Sequence
(Nucleotide)
CCCAGTTTTTCTTTTTCTGCAGTGGTTCCATTCCAACATGAAAGGCGAAGGTATCAAGCC
TAGCAGCCTAATCTGTTTAAATTTATTTTGTTTTATAAAAAATAATGTGGAGTGAAAAAT
TATAATATTATGGATGATATGAGGTGAAGTTGCTTTATTTGAAACTTTAATCAATTGAGA
TGAAATTTAATGAAACGAGATGAAATGGGATGAAATAAAGTATTAGTAATTATATTTATT
ATATTATGGTGGTTATTTACTGAAACTAGTGAACTTTTTGGCAGAACCCGAAAGGCTACG
AGGCTTTCATTTCATTTTCCCACATTCTGCACTTTCATAGATGCTAAACACTTACTAATC
CACCGTTATTACACGCCTGCACGCACGCACACTTTGAACACACTAAATTAACAAAAAAAC
TATTCAAAATAGTTCGCTCCTAGAGTTTCCGCCAGACTTATATTTTTCAGTGCGTTAATT
TAAATTTACACTTAAAAAATTTACAGTTTTGCGTAAAAAATTTGTTCCATTTGAAAAAGA
AAAAAAACCCTTTTTTTATTACATATATTATTACAATACATTACATACATTAGTTTTTTA
TTTATTTAAATTTCTTAGGACCGAATATGAGATCGGCGTCCGGTGCCCCTTTGGGATGTT
GGTATTTCTGACGAACATGCTGACCTCTGTTAGGATTACCGATACCTCCCGATCCACCAC
CGCTCTCTGCGCTATATTCTTCTTCTTCTTGTCTTTCCGATATATTTAGAGTAAGTCGTT
TAACTCGTTCCATTTCTTGTTTATCAGCTAAAGCTTGTTGTTGTAGATTGCTGGCCAATT
CCGGTGGAGCACTGAACGATTTATATTGTGGTTTCGTTCCTTTACGAACCATAAGAACGA
ATTCCACGCCCTCTTTTCCTTGCAAGAGCTGTTCATACGTCTTCTTCGTAGTCTGTCTGC
AGGTCATCGGGACAGCAATGTCGCGTTGTTGCGGTCTATTCTCCCGTTGTCTTTCTGCAA
TATTTTCTGTTACCATTTTCTCGAATGCCGATTCGAACTCAACGTCTTCTACCTAAAAAC
CGAAATGCATACGAGTATATGTAGTAGGTACACTGATTTTGTAAAATATTTTAAAAATAT
ATCAAAGATCTCCACTTACATGTTTAGTAGCAGGTCTTCGTGGCTCAATTGCCATTTCAT
CTTGCATTTCGTTTTCGTCATTAACATTATTTTCGGTAATCGGTTCTTCATCAGAGCTTT
CATCAGGCAATTGCGGATTGTCCGTTTCATCATCCGTTTCCATGATTGTGTCTAAGCCGT
CGTTCACACTATCATCACCTTGATCCTCATTATCGTACTCTTCCTCTCCTAGCTCCGGAT
ATAAAGTCTGTCGTAGTTCATCTATTGCATCCTTACACTGTTGCCAGCTCGTAAACAAAG
TCAACTTAGGGCGTAAAGTCGTCAGGCATTCTTGATAAATATATTTAACGTAAATAGGGA
ATTGATAGTCTTTTGTCCATATCGGATCAGAGAACTTGAACCAATAGTAATTTTGGAAGA
AGGTCAAAAAATAGTCTAATCTTTTTTTGCTCGAACCACTGTTGAAGTATGCACCACAAG
TCTCAAGCAGAGCGCAGACTAGTCTTATTCTAAAAACATTATCAGATGGGTCCAATACAG
ATACACTGCTGTGATCATTGGTGACACCAAATGTTATAAATGAATATAAAACAGTGAAAA
CATCTCGAGAATCTAATAATTTATAATTATAGAGTTCTCCGAGATACCGAACAGTAGCTA
TCCTTCTTTGATTATATCTTGGATGTGGGTCTTCCATTGTTACCCTTATTTCTTCTAATA
TTGTGTCAACGACTGCTGGAGCTACTACTTCTTGCCAGATTGCCAGTTCAGCTGTCAGTC
TGGCCAGAGCCCTTCTGGCACTTGCTCTTACCCTCCAACCTCCTGCGAGATGTTGTATGG
CAATGGCGGATACCTCTGGGTCATCCCAATTCAGTTTTCGCATTAGTCTAAGAATTTTTT
CCTCATTACTTTTCTGCAAGTCTTCATGAAGTATTTTTCTGATAAATTGATGAAGTGGTG
GCTCTTCTTCTTTAGGCTGAACAGGAGTTTCGGGAGGGCAAACGTAATAGAATGCGTTTT
CTATCTGTGTTACATATCGCGAATCTAGAGCTGAAACAGTTTTTTTTCGCATCATTTGCT
GTAAATATATCATAGTCCTTTGGTGTGTATCTGGATTACAGTATAAATATCTACCACACG
TTTCAAGCAGATTGCAAGCCATCTCAATATGGTGATGCTTAAAATCATGCAGCAACACTT
TCAAACAGTACAGCGCCTCCATTTTCGAATACAAATTAAACTTAACCAGTTCCCCAATGA
ATCGCACCACTTTTATCTTCGATTCAATATTTATTTGATCCTTTTTCCTGACATGATACT
TAAAGTCTTGTTTTAACATTTGACACAGGTCAACACATACTTCTGGCAGTACTGGATATA
AAATCGCAGCAAATCTTGAGTAAAATGGCAACAGATCTAGCCTTGTTCTGGCAACACTGA
AGAGAACTCTTGAAAGTTTCTTCCGATTATTCTTTGTATTGAGATTCAGGATAAAATCAA
CTGCTGCATTATCTATGAGTTCTCGGTTGATACAGTTGGGAAGTTCATTCAAAAATGTAT
CTAATCCATGTTTATTGGAAACATTTGGTGGTTGTATTTCTTCAGTTTCTACTTCTTGAA
CTACAGATGGGTCCTCATTGTCACTTAATTCATCCTCCTTCAAATCTTCATCTAACATTT
CTTCTGTTACCGTTTCAGTTTTGCTTTTCACAGTCTCTTTCATTTGATAGTTAGGCATAA
AAACTTTTAAGTCAGGCAAGCATGTATAGAATGTTCTAGAATCTTCGTCCTGCCAAGGAT
CAGTACCGGCTTGCATAGTGATGTCTTCATTGCCACCAATGGTTACACTTCCTTGAGTCT
CTATAACAGTCAGGGACAAAGTGGGAGGTTCACCAGCTTCACCCAAATCTTCTCCAAGAA
CTTCAGCAAAATTTTGTGCATTTACTAGTAGCTTGTCATAAGTTGTTTGATGTTGTTCTA
ATTGTTCTTTTCTTTCTTGTGAGAGTTCTCCTCTGGTGTGCAGAGTCCTCTGATTTGCTG
CATGCAGAGCTTGAAGTTGAGCTCTTTCCGCCAGCAGATGTTTGGTTAGTGAAAGAAAGT
AATCTTTCAAGAGAGTTCTAACTGCTGTTTGTTTCTCTGCCGGTAAAAATGTATTTCGAG
GAACAGGAATATTATGTTTCTCAGAAGCTTCTCGTATTTTTCTAGGCATAAGTCCAGCAT
AATCATCACCACAGTGTTTGCAAAATGATAACAAAATTGGTATATTGTTATGCTCTTCTT
TGTCCATGTTTATTAGAACAGTTAATACATTACCCAGCAAAGGCAATCCAGTTTTATTCA
TAAAAATACCGACAGCCACTAATTCTGCATAAAATCTTATATCCACCCGCAGTTTTGATG
AATTTGTTATTTTATCAGTCGCTTTGAATGTTAAAATCTTTTGCCAGTTTTCAAAAAAGT
TAGATGAAAAATCAGCGTAAGTACGATGAAGAACTGAACATAGAGTTATAGCAGCAGGAA
TATCAGACATTTTCAATTTTGCTTCTGCTATTGCAGCAGCCACTTCTGATATATATTTTG
TAAGATTTAATGTTGCAAAATCTTTCAAAAGTACATCCAGCTGAGAAGCACTAAATGATT
TTAGTTTTTTTACAAATGTGGTATTCTTTTTCAAACCTGAATCTAGCTTGGAAAAATAAT
TTTCTGGTGGTCGAGAGCAATTCAAATTTTGATTACGTATTTCATATTTTTGTTTCAATC
TGGCTTCCAAGTTAGCTGTATACTCTTCGAGAGCCGCTTTCTCATTTTCTTCTAAATCTT
TAAGCGGTTCTTCAATAGGTGTTTCGTTTGCCTCATCGTTGTTGGTGGCAGTCATTTTAT
CTTTTAGATAGGTATTATTTGAAGCCAATGGACACCACTATATGGTGTGAGCAACTTTCT
TTTGCATTTATTAACTCAGCAAATCACATTTAATTCATTTAAAAATTTACAAACATTTGG
GTAAGGTGTCATAAATATTATGTGTATTATCTTTTTTTTAAAGGGATTTTATGACCTGGT
AACTAAGACCTTTAAG
(4216 bp)

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