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Last updated: 2022/11/18
NameA_BomoIG_DN30710_c4_g2_i1
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)
collagen_alpha-1(IX)_chain_[Bombyx_mori]
Ontology
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005581 C collagen trimer
GO:0005737 C cytoplasm
GO:0005788 C endoplasmic reticulum lumen
Transcript
Level
FPKM:7.98 TPM:4.44
ORF EntryO_BomoIG100720_complete:A_BomoIG_DN30710_c4_g2_i1
Sequence
(Nucleotide)
GGCGAACAAATCTTGGTGATAGTTCGATCAGTACGCGTCTTGTCCCCATACTTACTGTGC
AACATTTAGCGAAATATGTTCATTTAACTAAATTAAAATGTATTTCTGGTTACCATACGT
CTTGGTCTTCCTATCTATTCTCTTCTCATACAGCAACGGGCAAGCAGATAATTTCACGAC
AATGGCTCCGTTCGCGAGATCCTTTTGCTCTCCAAATTCGAAAGACTCAGACTTCCAGAC
GGTGGATCTGATAGCCGTATATCGACTGGATAGATCGGACACCACCGGTGTGACCCTAGT
TCAGGGGTCTCAGGATCTTCAAATGGCGTATAGGATTGGAGGGGGAGCCAATCTAACTTT
ACCTCTGAAAGAAGTGTTCCCGGGTGGTCTTCCGAACCGGTTCAGTGTGGAGGGAACCTT
TAATGCTCGCGGACACCGAAGACCGTGGAGTCTTCTGCGAGCACGTTCAAATAACGTGCT
GTTTTCTCTCATTTTAATGCCGGAACCAAGGAAAGTTGCGGTCCTAGTGCAGGGTTCTAG
GGCCGTGTTCAAGAGTCCTGAGTTATTTACTACGGGATGGCACAAGCTACACGTGGCTGT
CGCGAATCGATCGGTTCATATAGCAGTCGATTGTGTTGAGTTGAATCCAGTGAACATCTC
CGCTTACGACTTCAGCAATGCCACCTCACTGACGATTGTCTCAAACGATGACGGCACGCC
GGCACCGATTGATCTTCAGTGGCTCTCGTTGAGTTGCGACCGCTACGTTCTGAAGGAAGA
TAGCTGTGAGGAGATTGATAATCCAAACTACCTGATAGCAACTTCAGCGCCGCCCTTTGC
TTTCGACCCATCGTCCAGAGAAATTCCTTCGCTAAACACGACTTGCAATGTGACGTGTCC
AGAAGGTCCCATGGGCCCTCCTGGACCTACAGGCGAACAGGGCGTGAGGGGTCTCCCAGG
ACTACCGGGCTTTAGAGGCGAGAAAGGCGAAATTGGGCCCATTGGCCCAGCCGGCCCGAA
AGGTGACAAAGGCGAAGTTGGGCCGCCCGGTTTAGCCGTTAATGTAACTGGTACAGGAGT
GAAGGGTGAACAAGGACCACCAGGCCCCAGGGGTTATAAAGGCGATAAAGGCGAAACTGG
ATCGAAAGGTGATACCGGCGATCCAGGTCCCGTTGGGTTTTCTGGTATACCCGGAGTCGA
TGGGAAAGACGGTATTCCTGGGTCACCAGGCCCAATCGGTCCTCCTGGGATACCGGGACC
TCGTGGACCACCCGGACCATTGACCAATATCAACGCTTCTCTAATACAAGGTGCTAAAGG
CGAAAGGGGGTCACCTGGTCGACCAGGGAGAGACGGTGGTCCCGGACCCGTCGGACCTCC
TGGAAAGGATGGCGAAAGGGGTCTACCAGGGCCGGAGGGTGCCCCTGGTGCAGCTGGTCT
CCCCGCTCCCAGTGGGCCGCGCGGTCCCCCTGGGGAGAGGGGCCCTGAAGGACCACAGGG
TCCCGAGGGTCCTTCAGGTAAACCTGGAACTCCAGGCCCGCCAGGTGTACCTGCCCCCTT
AATCACTGCAGCCAGTATACCGGGTCCTCCTGGACCGGCGGGGGTGCGCGGAGAGAAAGG
GGATCCAGGGTTACCGGGTCTTCCAGGGCGGGATGGGCTTGACGGAATTCCAGGTATACC
AGGGCATGCTGGCCCGCCCGGGGCTCCCGGAGTCAACACCGTCTCAGTACAAACACCGTC
GATGTCGGAAAATGACGTGAGGAACATTTGCGAAAGCATCGTCAGAGAACGACTGAACGA
GCTATCAGCAAGTCTAACGGCACCCACCCAGACCGTGGTTACAAAGCGTGGCCCTCCAGG
AAGACCTGGTCTTCCTGGGCCTCCGGGTGTCCGAGGGGAATCAGGCGAGCCTGGTCCACG
TGGGTACCCTGGAGAACCAGGTGATACGGGGAGACCGGGACCATCGGGAAGTAATGGCGC
AAAGGGCGATAAAGGAGATAGGGGTGTTGAGGGAGTAGGGCTACCCGGAACCGAAGGTCC
TAGAGGAGCTCCGGGTCCAGTTGGTCTACCTGGGTTCGAGGGTAGGAGGGGAGAACGAGG
AGATCCTGGTCGAGAAGGGCCTATAGGACCTCGCGGACCTCCAGGACAGCGGGGGGTTTG
TGATTGTCCCGTAGCCTACTACAGCTACCCACAGGGACTCGTCAAAGGACCGTAGACCGG
GTTCTTCAATTCACAAACAGTATTCTCGAAGTCCCGTTAAGCAAATAATAATCATTTGAA
GAATCTCCAAAAAAAAATACTGTTTCTAGAAACCTGTACACATAAATAAAAGAAAGAAAA
AAAAAACAAAAAAAAAAAAAAAAA
(2364 bp)

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