SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN30709_c1_g1_i1
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		nicastrin_[Bombyx_mori]
Ontology
GO:0005770 C late endosome
GO:0005886 C plasma membrane
GO:0006509 P membrane protein ectodomain proteolysis
GO:0007010 P cytoskeleton organization
GO:0007219 P Notch signaling pathway
GO:0007220 P Notch receptor processing
GO:0008594 P photoreceptor cell morphogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016485 P protein processing
GO:0045314 P regulation of compound eye photoreceptor development
GO:0045463 P R8 cell development
GO:0046331 P lateral inhibition
GO:0055037 C recycling endosome
GO:0070765 C gamma-secretase complex
Transcript
Level		FPKM:26.47 TPM:14.74
ORF EntryO_BomoIG102109_complete:A_BomoIG_DN30709_c1_g1_i1
Sequence
(Nucleotide)
GGAGGAGAGAGCGAAATACTTGCTTCACCGCTGCGATTATTTATGGCCCAAACTGCACGG
ACAACTATACACGAGATTAATCATGTCGATGTTGTGCTAAATATGCAGTCCAGTATAATA
GGGATAAGGATTTACTTCATCTTACTAAAGTAGATTTGCGTGAATCTTGGAAAACCTCCT
TGGTGGTCATGTTAGTGAAAAGGAAAATTAATATTAATGAAAAGAAAAGAAAATAAAAGG
TTTTATTATTTATATTTCAATTTAAATACTATATTTAGATTTAATTACCTGTACTTATAA
AGTCATAAGTTATTGTTAATAAAATTTTGTTTTCCATTTATTAAATTAAGCGGATGGAAT
GTGGCAAATGTTGTGAAATAAATCACAGCCAAATAATATTTCTTGACTGCTGTCACACTC
TCTAACAGTTCACAGAACGTAAAATTCCGGAAGCAGCATCGTCAACAACGATGGTTGCTG
ACGGCGGATCGACAAATATGAGTGATGAGTGTCTGCGTAGCCAAAACGTGAGCAGGGCCG
CAATAAGGGTTGACACGGCACCGGTCGCGGCCGCCACGCACGCGCTGCCGCCGCTCGCCG
ACACGAACACTCGGGCCCACATTGTTTGCCAAACTGACTCGGTCCACGTAGAATACGTAC
CCGATTTAAAATCATAATCTGATATTATAAAAGCTGGACTGAGTGCTTGACTAAAGTTCA
TTGTGGTCTCGATGCAAACGCCATTGTGATTCCATCCTTTTAACCAGAGCCTTGTATATC
CCGATTCTGGTTTCGTTTCGCACTGTGATTTGTTGAGCGAGAGTTGCGTGCCGGTAAGCA
AGGCCAGCAGGTGTCCGGCGAACACGGGCGCCACCGTGTTCCAGGAGGTCACGCCCACGT
ACAGCGGCGCCGGCCCTGCACCCTCCCGCGGCCCCTCGTTGCCGCCAAACTCCGCAGCCG
ATAACAACTTGCACGTCTCGTTCTTCAGGAAACAGTACAGCATTTCATCTACCAAATGTG
CGGACACTGTAATATTACCAGTGTACGCCTCACCGACAACTCTTTGATATAGTGCATGAG
CTAAAGCCGTCGCCAACCGAGATATCTTTACTTGAGTGTCAGTTTCTTTCATCAAACCAT
CTGCTATGAGTTCAGCTGTGGATATAAATGTAACATTGTTGATCATACTGATGTTTTTAT
AGACATAAGCGATTTTGTCACTGTCGTCCAAAGCAGAGTTGTAGAAAACATTCGTGAAGG
TCTCTTTGTGATCAACTAATAACATTTCAAGCATTTCACCGCTCTCTGTCACATTGGATA
ATATTCTTCTGAATGAATGTATAGATGACGGTGGCAGAGAGCCATTAAAGATTCCGGGTA
TTGTCATGTTATATGCATTCGACAATTGTTTCAGGAAGATTTGTATATCATTATCACCGT
CATTTATTGTTGATGGCGCGAGGGTAGGTACAAAAGCGTTCAAGGGCCATGTATTTTCGT
TCACATAATCTGATAAGGATCCACCGATCTGGCCGATTTCAACGTGTAGTTTTACATCGG
TCGGTGCCAGCGGTGCATTCGGCGGCCACACCCCGCGCTTTATGTCGTAGGCAACTCGCT
GTGAACCAATATAATCAAATGCTTCCCCGTTGAATAACGTCCATAATATATTCGTCTCGT
ATAGATTCGATTTAGAAACTGGAATCAGCTGAGCTAATGCGGCGGCTGCTGATATCAGCG
TGACTAGGCCGACGACAGAACTAGCAGCACCCGGAGACACCCCATCAAATAAAGAAGCTG
AATCGATCCTTGCAGTCACCAACGTGATGGACTGCTTCTTAGATTCTTTCGTTCTAGGGA
AAAGGGAATAATAAACGTTTTGATCGCCAAGCGGATCGCACACTTTCGTTGTTGTTACTA
TCGTTGAGGTAGCTGACCTTCTCATGCAAACTTCGGTATTTATTGCAGCAAACATGAAGG
AATTCAACTGTATTGAGCATAGCGACCGACCCCTTTGGTTGTTTTTATCGTAATTGAATC
TTCCGAAACAATGACTGATTTTTTCAATTTCTTCATATCTTGATTCTGGTATGAAAAATA
TTGGAAATGGTATTTCTCTCTTTAATAAACCTGTGCCTTTTTCATTCCACACAACACCAC
CTTCCTTTGAAGATGAACACTGGTTTCCATCTGCTGATGAAAACTCATTTGGACATCTTG
TGTCATGTGTAAAAAATGAGGGGATATCAGAAGCATTTTCATATGTAAGTACTCCTGCAA
TATTTGTTGGATGATCTATGAGAAACTCTACTAGGCCAAATTTTGATGTGCTGACAACAG
CCATATATGGGCCTGCAGATGCATTAGTGGCAAGCCACAAAACATCATCATGATCTTGAA
CAAAATGTACAACTCCAACTGCACCTTTATCTGATGTAGAGCAACCAGTTTGATGTGTGC
CATTGAGCCGCCTAAAACAGGCTGCACTGCCTTCAATAGAGGAATATATCAGTTCATGTA
GCCTTTCGCAACTATAACCTTTAAATATGAGTAAGATTATGGTAACTAACAAATATATAT
GTTTCAAAGACATTCTGCTTAGATTAACACTTCAGTCACATTCACTTTCCTTTGATCAAC
ACGATTTCATACTAAGTAGCTGATATAATTGTAATACGCTCAGAAAATGAGAATGTTACA
GGTTTTTATTCCTTTTTTAGGTGGACCTGGTAAGCTAATTTTAAAAATATTAGGTTTTCA
ATTATTATGGATCGTCTCTTTCATTCACTTGTTTCGGAAATATATATATATTTTTTTAAA
GAAAGAT
(2827 bp)

- SilkBase 1999-2023 -