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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN30703_c7_g4_i9
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		transcription_factor_AP-4_[Bombyx_mori]
Ontology
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003713 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006461 P protein-containing complex assembly
GO:0006978 P DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator
GO:0008285 P negative regulation of cell population proliferation
GO:0010629 P negative regulation of gene expression
GO:0017053 C transcription repressor complex
GO:0042803 F protein homodimerization activity
GO:0042826 F histone deacetylase binding
GO:0043065 P positive regulation of apoptotic process
GO:0043392 P negative regulation of DNA binding
GO:0043565 F sequence-specific DNA binding
GO:0043922 P negative regulation by host of viral transcription
GO:0043923 P positive regulation by host of viral transcription
GO:0044212 F transcription cis-regulatory region binding
GO:0045736 P negative regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0046983 F protein dimerization activity
GO:0070888 F E-box binding
GO:0071157 P regulation of cell cycle
GO:0071549 P cellular response to dexamethasone stimulus
GO:2001269 P positive regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway
Transcript
Level		FPKM:0.31 TPM:0.17
ORF EntryO_BomoIG101453_complete:A_BomoIG_DN30703_c7_g4_i9
Sequence
(Nucleotide)
CTATGGTCTTCAGTGCATCGACGTATTGTTGCCCTTGACTTGTGTAAAAATTGCTGTTTT
TCTGTAATTGATGCATAAAATTTTTAATACCGAATGTTATTATGTTGGTTTGATGTGTGA
CTAAAGGACTGTACAACGGATTTAGTGTGTTGTTTAGTGATATTGCTTTTAATTTGCGAA
GCGTCACCTGACTGAACTCATTGTCATTTCCCGCCATTGTGGCTCGTGTGTAAACTGATG
GATATTAGTTAACGCCTTGTGCATCCTCTGAAGTATATGAGGAATAAGTAGAAAACAACG
ACTAAGGAATGTCATTGCACGTGAGAAACATTCGACATCAGGGAGTAAGACAATGGAGGC
AGAAAAAAGGATTAGACGAGAAATTGCCAACAGCAATGAACGCCGACGAATGCAGAGCAT
CAATGCAGGTTTTCAAGCTTTGCGGACTTTACTTCCACGTCATGAGGGCGAAAAATTAAG
CAAAGCAGCTATTTTACAACAAACTGCAGAATACATTTACAATCTTGAACAAGAGAAAAC
AAGACTACTTTCACAGAATTGTCAACTAAAGAGATTACTAAATCAGCATGAAGGAGGTGA
AGTTCCATTGAAAAAAAGAAAAGGTGATATACTAACACATATACCATCAGTCATACCTCC
TGATTCTACAGACGATACTTTATCGAATTCACGATCACCCGAACCAGTTGCTGTTATAAC
AATGTCAAACACATCACAGAAAAAAGATTCTGAGTGTGTAGAATTACGGGCGCAACTTGA
ACAGGAACGGAGATTACGTCGCTTGCTTGCAGAGCGGTTCAACGCACTAGAAACGCAGGT
CTATCCTAAAACAGGGCACGACATCGCGCGACCTTTATCAGGCCCTATCGAACAGACTGA
AATCTCAGACTGCAAAGTGGAGAATGAAGAAATTCCCATAAAACCTGTTGAGCCACCCCC
ACCCACAACTCAATTACTTGAAGCCGCCATCAAGGCTGAGCCCCGAGTGGAAGTCGAGGT
ACTGCCAGAGGCGAATCAAGACAGCTCTTCGCGGCTCTACCTAGCAAGCACGAGCCGCCA
AAACCTCGAGACCATTGTGGAGGCTATCCGACACTTGGAGGGCGACCACCTGTTTCGCGA
GGAGACGGCCGAAGCGCCCCTAGCGCTAACCAAGAAGCCGAGTGCGCCCCCGCCACGACC
CGGTGTCATCGTCGTCAAGCACTTGTGATCGCCTCGACGAGCGGTTTAGACTTTTAGCTC
GTAAAATGCTTATCGCTTAGCGAGCGCACCTGACCCTCCTCGAATGTAGTTTTAAATTTT
AGTTATTTAGTTGTATCTTCCAAAGTGACGAATCGATAAGTCTGCGTCTTTGTTTATTTT
ATGCATTGAAGTCAAATAAAACACGGTAGATTTAGTCCTCCGGGTGAGCATTCTAATGGA
CGTATGGTCTCAAATATTATTATTTCATACTGTTGTGTTATTTTTACATGTAAAATTATT
GTAACTGTGTTAGTGAAATGAGGGGTGACTGAAATATTTGTCGCGAGTTCTAACTCATTG
CTTAAAAATATATGGATTGATTGATCAGAAAAATATGTACAAAAAAGCATCATTATAGTG
AAGAATATTTTAGCCGAGATACAAGCCGCGTTGGAACTGGCGACGAATGGTAGCAATGCA
GTACGCCATGTGCCAAAAGTCGAAAGATGGCTAGGTGTATTGTAAATTTATAATGAATGT
GTGGTTTGCATTAGTTACGAATTGTGATATTTTTACTGGAACTTGAAAGACAATGCAAAA
AATCAAAAAATTATGATTAATCTACCATAAACCAATAAAACACTCATATATCTACGCTAA
AAAGAGGGATTTTCGAAAATTTCAGCAATATGCAGCAAGTTAGTAAAGTACCACTTAATC
TAATAAAAGTATATTAGCTTGAATATTTTAAAATAATTGAAAAACAAGTATTGACTAAGC
TTTGTAAATTTTTAAAATGAACATCATTTTATAAGTTAATGAACATTATAAGTGTTGCAA
AAACAGCTTACAGCTATGGAATAGAGAGTATAAATGAAGACCCTAACTATTATGCTCTAT
AGCTTCCTGTAAAAATAATATATGAAATATCTAGTAAATGATTATAATTAGGTTTAAAAC
AGCAATAATATATTTAATAAAAAGTTGACATTGAGAGATCTGAAATAATGATTGCTTCAA
AATGTATTTTATAGGGCAATATAACTTTGAATGACCATATTGTAAGTTTTCTTGATAATA
TTTAACTGGAACCCCAGTGCATAGCTTGATTCTTATTCGGAATTAGTAAATTTAATAATG
GTATTGTTCGCCATTGCATTTTGGGGACAAAAATACCCCTGCATTCCATGTTGTTGAATT
CTTTAAAGAGGTATTCCCTATATTGCGTAGTTAATCGAATGAGTTAGTGTGTATTTTAAT
CAATTTAAATTACTAGTGTAATTTACTGCTTAAAAATATAATTACCTACTTAATAATATA
TATTTATCTACTAGTATTGGAGTTATATATTTTAATTGAAAATTTTATAGTTCAGTGAAT
GAAAATTTGTGAAATTCAATAACCTTATTCAATTTAAAGAATTTCCAATGTTCAAGTTTC
TTTGGTTTTCAATTGTAAATTAGAAGTTGTCATGGTAATGTTTTATTGTGTGGACAAGTC
TACCAAGTAAGCAATTGCATATGTAAGTCGATTTGGCAGATAAATTGATTGATCAACATG
ATGAAATTGTTAATTTTAATTACATATGCAGTCTTTGACATCGAAATAATATAGCAATCA
TCAAAAAGATATAAGAGAAGTATAAAGACACAATATAAGAAAGATGAAGATAAACAGAAT
GAAAATTTGAAAGTGTTAATTTCTTTCTTGCGTGTATTGTATTCAAGGTAGTAGCGTAAT
TATATATTTTAAAAATTCACAAGAAAAAAGAGCTGTCTTTTTTTTTTTTACAAGAAACTT
ATTTTCATTTTCCGATTGTACTCTAGACAACCTTTGTTGCGATCGAAAGGGATCCGAATA
AATGTTAACGTGAACAGTGATTAAGCTAAATTGCATTCAATTGCTGACATTTTTGTTAGA
AATACATATTGTGCTTTTGTTATTTAAATCGTAAGTTTTGTGTGTGTGTATTTTAAGTTA
GACTCAGTAACAGAGTGAAACTGATTTAAGTACAGTGTACTTCAGGTAGTCTTATGAGGA
GTCATGGATTTTTAAGACTGATCAATTTTCATTATTAAGTTACACTACATAGTTCAAGTA
AATAATAATAATAGTATAGTTTGTGTGCGTGTGTGTGTATGTGTGTTGTTTATGTATCTT
GATGTTTATATGTACATTTAATATTTTAATGCCTTTTGGTGGACAGAGATCACTAGTCGA
TTCATATTTTGTAAAGAATTATTAGTTTGTAGACAGATAAATACTTAGTTTCTAGAGAAA
TTATCCTTTATTGCTATGAGGACTGAACCATTATTATTCTGCACTTTATGCACTTATAAT
ATCATATTTCTCTTCGTTAATAATTTGAATGAGTTTGTATTAATTTATATTAAAAAATCA
TAGTGATCTCTATACCTTTAGGCAATAAATATACAATGTGTGCTTCAACGAAATGCTCTT
CTTCATTATGGACGTAATCCTTGTATTGTGTTTTTTTAATAGACCAATTATGACACCGAT
TTAACGTCCTGTAATAAACTTTGTGGTTGCACATATAGTGGTGTGAGGTTGCATGTTTAA
AAATGCAGCTGAATAAAATATTAACCCTTCCTCTTAAAAGATGTAATTACAGTTGATTCA
GCGATATCTTAATTTTTATTTACGTTTATTTCATTAACACTCTACCACAGCTGTTTGTTG
AACTATATTGATAGAAAGACAGAAGTCAAAGTCTTGTTTTATTTTAATTTATATCAATAT
ATGTAATTTAACTATATTAATCTTTTGAATTACATATTTTCTTATAAAATAACACTTTTT
TTAACAGATAGAAATGAGATTAATATTTCTTGTGCGTTTGAAATCGTTTTCATAGTTGGT
TGCCATTTTTCTCCCGAGAAAGCTCATTACGTCACTCTGTTTCTGAGTCCGTAATTTTAG
AAGTTGCCTACCGCCTTTAAATTATGTCATAGGATAATTATTAACTATGTAACATAACAG
ACTTGGTTATACTATTAGTGTAGTCAGAATAGAAGTAAGAGATTTTAAGTCAAAGAAACA
AGTTAAATTGTTTAAAATGTGTTATTATTTATGTCGTAAAGTATTAAAAACGGTTATTTC
TTATTAATTAGTTTGTAACGGATAGCAATCGTCTGTATTTTAAAGCTAAATATTTTTCTT
GTCGAGCCAAGTCTACATTCATTCTTTCATACAATGATTGATTGATTCTTGTGTAAAAAT
TGTAGTAATTATTAATAAAAACTTATAACTTTATGAAGTAGGTACCAGTTTTCTTCTTTT
TTTTTGCAATTGATATTATTTTCTACAGATTTAACACAGAATCATTCAAACACTCAAATT
CAAGCAGAGAATATTTGTATGTGTTTAATACATAATGTTCATTATCTGTTGTTAAATAAA
AAAAGATATTAATATCTTTTTT
(4642 bp)

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