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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN30700_c2_g1_i9
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		ring_finger_protein_5_[Bombyx_mori]
Ontology
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006914 P autophagy
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0036503 P ERAD pathway
GO:0036513 C Derlin-1 retrotranslocation complex
GO:0044390 F ubiquitin-like protein conjugating enzyme binding
GO:0046872 F metal ion binding
GO:0051865 P protein autoubiquitination
GO:1904264 F ubiquitin protein ligase activity
Transcript
Level		FPKM:13.77 TPM:7.67
ORF EntryO_BomoIG100835_complete:A_BomoIG_DN30700_c2_g1_i9
Sequence
(Nucleotide)
TGTACTGCGAGTTCCAATATTTTCTATAAACATCGACTGTCATAGGACCCTTGTCCTTAC
AGCTGACAATTGACAATCAAGATTTTTTGACGCTGAATGACATCTACTGACAGATCAGCA
ATCAGCATACCACGGGATTGGAAATGTGATTTATTTATTTATTAACAAGTTTCTATATGA
AATAATAAACTCAAACATCAAATTTAAAGTGGGAAATGGCGGAGACTAGTCAAGCGCGAG
CGAGCCCCTCGGCGCCTGGGGGCGACGCTGGTGGCGAAGAAGACAAACATGACGAAAGAA
TGTTAGAATGCAACATCTGTCTGGACACAGCCCGTGATGCAGTCGTCAGTATGTGCGGCC
ACCTCTTCTGCTGGCCATGTTTACATCAATGGTTGGAAACCAGACCCAGTCGGCAAGTCT
GTCCTGTTTGCAAGGCTGCCATCAGCAGAGAGAAAGTGATCCCGCTCTATGGAAGAGGAA
ACACAAAGCAGGAAGACCCAAGAAACAAGGTGCCCCCCCGGCCGGCAGGACAGCGCACGG
AGCCGGAGAGTACGAGCGGCTTCCCAGGTTTCGGCTTCGGCGAGGGATTCCACATGTCGT
TCGGGATAGGAGCCTTCCCGTTTGGAATTTTCACCTCAACATTTAATTTTGGTGATCCAA
GGCCTAGCGCCGCGCCGCGCGGTACGGCCCAGTTCGAAGAAGAGCAGTTCCTATCGAAGA
TATTCCTGTGGGTCGCGATCCTGTTCGTGCTGTGGCTGGTGTTTGCCTGACCGCCCACAA
GTACTGCCACCAGGTTACAATACTAATTAACTCTGTAAACATTTTATTTAATAGAAGAAT
ACTTGTAAAGTTCTTTTCAAAATTGATTCTTGTGACTACGGTAGTGTTTTGTTGACAGTG
ACAGATCAAGTCGTGGTTATTTAATTAAAGACACCGAACCTTTTATCTGTATATTTATGT
GATGATGAGAACGATATCTGCGAATTTGTTGCATTTTTTTTTTCAAATTAAAAAAGAGCA
ATAACGTGTCACCATCAGCAACCGCCAATTTGAATATGGCTATCAATAGTAAACGTTTTT
AATTTTTCCATAACACTAAATCAAATGAAAGGAAAAGGGTCAATGACCCTTGTAGTATTG
GTTCGAAATATTTTTGATGCGATGATACCTCTGTGCGAGTATTAAATGCGGCGCGGATCT
GGTAGAACTGAAAAGCGAAAACATTTATGTAAATATTCCGTATGTTCTTGGATATTCGCG
AGCCGTGCGAAATGAAAACATTTACAATTTACCTACGGTTTAGTCTCACGTATCTCTCAT
CGTTTGATTTTATTAATTGCGCCGTTTTGAATACAGAATATTTCCCACAGTTTTTAACAT
TGCGTTAAATAAAAATACGTAGAACAAAAATTATTACGAGTATTATAAACGTCAGAAATA
ACAAAACATAATGTTAACACTAAAGCTATTCTCTGTAGCAACCAAACGAATAAATGAAGT
TTTAACTAACACAATCAGATGATTATTGAGAAAAAAATCAAATATATTTCGGTGTTTTTA
GTTAGATAACAACCGCTACGTAAAAACTCTGACTGGCTTAAAGAAATCATTTAATTTCTG
AGGTTTGACGAGTGAACGAAAATATTTACGGCTCAATATCGCGTTCAGTTCAAACACGAA
ACAATTCGAGAGCTCGACCTCACGCCTCGAGCAGCAATCGAGTGGCGTCCGTGAGCGCCG
ATGAGCACTAAACGCCGAGTGGCTTGTGAGGTGGACGCATAGAAATGAAATAAGAAAAAA
CACCACCAGAACGCCTGTTAGAATGACATCACAAATGTTGTAATGTCGATAAATATCCAT
TAACCAGGACTATGACATACCGTAAAGCTCACCTGTGCTCAATATGAGTATTGTTTTGGA
AACGTGCAGGTTCACGGCACAGTGCTCTCAACTCCGTACACATTTTTCAAACACAAATTT
AAAAAATAAAACATCATTGGACTGTCGCCATTCTGTATGCTTAGTGCGAGTTTTTTAACG
TTCTCGATGCGTAAAAGTTAACTCAAATTTGTATGAAGTTGAAAAAGTCCCTTCGTTTCC
CGCTCGGGGAAAAAAACTCGCAATAAGTATGTACACTGTTCTAATCTAATATTATTCCTG
GTATTTTTTCCTATTGAACCAACATTCCTTTTTTTATGATAACCTTTAAAAGTTCATAAT
AATAAAATACATATTATGTAATTTATTTTAATGTTAAAATTAACGTGCATTGATGTTTGT
ATCAGAAGGTAATTTTCTAAAATTGTTGGAAATTGTTAAATTGACGCATTCGAAGGAAAG
TTTTGGGCACCACAACTTCATGGTGAGTTCAATGAGGTCGGCTTGGCATCCGTGGGGATG
TTGCCTTCGTGGTGTGGTGGGCTGATGGCTGCTCATCACAAATTGGCGCGGGGGTGGTAC
CAAAGATGGTGGTAGATCGTAAAAAAGTATTTTGGTGGAAACGCTGAAAATTACCTCCTG
AAAAACAGTAGTATGTAGTAAGTTTAGGAAACAGTAAAAAGGTCTAACGGTTTCAAAAAT
GAATTTAATCACGCCAGTAATTTAATTAACTACATTTGCGCTATATTTTGAAGTATTGCG
TGTTCAATCTGTGGTTATTATAATATTTTCGTGTATATAACGTGTATATATTATTATTGT
GTTATTGTATTTGCTGTAAGTACATAAATTTTAATGGGAAGGTTCATTTTATTGTAATAA
ATAAAATAAAATAATCTAAAAAAAAAA
(2787 bp)

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