SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN30279_c0_g1_i1
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		zinc_finger_protein_chinmo_[Bombyx_mori]
Ontology
GO:0000794 C condensed nuclear chromosome
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006342 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007435 P salivary gland morphogenesis
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0031208 F POZ domain binding
GO:0031519 C PcG protein complex
GO:0035167 P larval lymph gland hemopoiesis
GO:0042803 F protein homodimerization activity
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
Transcript
Level		FPKM:2.05 TPM:1.14
ORF EntryO_BomoIG1564_complete:A_BomoIG_DN30279_c0_g1_i1
Sequence
(Nucleotide)
AGCGAGATAATATTAAATAATATGTTTATTATAACTGAACAATTAAAAACGCTTACTGAA
ATATGACGCCAATAAAATGGATTAACATGAAAAAAGAAAAACCCAACTCACGAATATGAC
GAAGCGATACGTGCGAACATCGTTTGTCTTAATAAGCCAAGTCTCGATTTCGATTTGCAG
AAAATTCGAGAAGGCACTGGATTTATCATGTCATTACATCGATATACCGGCCCTATAACT
GACCACAAGGGGAGCCACGTAGAGAAGTCAATACATGTGACAACCTAACGTGTAAGCTAT
TTAGGCTCTCAAATTTCTAGGTCAGTGTATGTTCAAAAATTAATCTCTCAACAATTGGTA
GGTACTGTCGGAAATATGTTATTCCGATAATCAGTTTTTTTTTTGTTTCCCGACAAGTTA
TTTCGTCGTATATTGTTGAACCCATCCTAAGCTGTATTCAGTAGAAAGAGACCACCGCCA
ACCACGTGTTAAAGTCACAGACAAGAATAAAACGTGTGTTCAATGTGCGATAATTACTTA
CGTTAAACGCAAAAAATATAAGCCACGTTCACTATTTGCCATCATCTGTCGGTCTAAATA
ACATCAATCAAAGCTTATACCCTCGCTTCGGAATGAAGGAAATATGAAAATGATTTTTTT
TTATTGTCTAATAGTGCATAATTGAAGTCCGTGAACTTTTACCACTTCAAACTACATATC
TCCCCATTACCGATATTGTTTGATGAACTGGAAATCAATACAGGCTTACCTTTCAAAAAC
GTAATTATTATTTCATAATACATTTACATACAAAAATCTCAATGGCCTGTCTATTCGGAT
AAAAAGCTTGAAAATTTCAAATCAACTGTATTTTATTAGCTTCTATTTGGTATTTGTATA
ATGCGTAATCGTTCGAGATTATTCTTGTGTCGAATATCTCAACATCGGAGATTTTCCGTC
AACTAATCAATTCAAAGAATTCGTCAAACAAAAAATAACAACAAATTGAATACTCTCAGT
AAAATGTGACTAAAGATTTACATAAAAGGAATAATAATAGCCATTTAAAAGAAAACTAAA
ACGCTGTCTTTTCAACGGTAGATAAAAACTGAATCTAAAATAATAATATATAAAAGTCAC
TTAGCCTTGATAAACATTCGTCTATAATATATTCTATAATGATATCTTAAAATGTAAATA
TAATAATAAATATGAATGCAACTTATTCCTAAATATCAGGAATATAACACACAGACGCTA
CATTCACTCACGACAATAATAAATAATACAAACGAATGTCAACTTAAAATTGAAGTTATT
TGGCACTGACCGTTGTAACCTAAGACCAATTATTGCAGTTGAATTTATAATAAAAGATTA
ACACGAGACGGAGCCCCGCGGTATCTACTCAACAAAATATAATACAATGACACCGCAAGA
CTCCCACAATTTATCAATAAAATAATTATTCTCTTTCAAAAAATCTCAACTGGTTGCACT
TGTAATGACTAGGATTAAAGAAGCAGTAAGTGGCCTTCTAAATGCACTACGATAAGAAAC
CTAACGGAATGTTAAAATCGATACCATCGCCATGAAACATATAATTATTTGGTATGAATA
GTAACATCCGCTACAGGCGAGCCCGTTGCGTACTGCAGAAATGGATTTATCAAACACATT
CACGCATCAGCCCTTACATGCGAAAATTTTAACACGTTTTTTTTTTTTTCGATTTTCCCT
AACTACTTAGAATCTACGGCAAATTGTACTTTGTACAAAACTGAAGCCCGTTTAAATTCA
ATGTGTATTTTAAAAAAAAAAAACTGTTTGAAACCCTATTTTCGTATTTTTTCGCATTTA
TCTCATCGTACAAATACATAGAATGTGGCAATATGAGGAAATTATCATTAAGTATACGGC
CTGTTCGATATTGTAATGATTGGTTTTGTATCACAGATATATTTTATGTGTAAACTTAAA
ATATCTAGACTATTGTCATTATGAGCACAAAGCATTAGAATGTATTCAATAAAAACTATA
AGAAAAAAATAATGTATTCAATATAAAGAGGTAGTTTTGCCACAGGGTGCAGTAACAAAT
GTCTCAACCTAGGCCAAGGCGTTTACAACATTCTCCTATTATTTACACACACTTAGCCTA
TGACCATCAGTCTCAACAACATATCTAAGATTCCCTAGTTCTGGTTATTGAAATAAGGTA
CGTGATAACTAGACCGAGAGCACAAAATAAAACGAATATAAAGGTAACTTTTATCTCACA
GTCAACTGGACATATTACTATAAATTGCATAATTAAGGTACATAAAAGTGATGCGGGCGC
TATTACACGGGGTACAATATTTTTAAAACACGGTACCAGACAGATACGAGTACTGAGCAA
CCATTCGTAGTCACACCTGAACATTAAATTAAGTAACAATTATCGCACAATTCAAACCTT
AAAATCTTAAGATAAAATTTTGAGGTAGATACTGTTTTTTTATAATATGCATCGACGAGG
TAATTTATTGTACGTTTGTTACGTACCGTTCGCGGCCCGGCGAGGGCGACCAGGGACATA
AGGACATCCACAAGCGCAGACTATAAAATTAAACGTCAAAAAATTATACTCCACTGGATA
CATTTAACATTAAAGAGGTAGATTTACGGTCGCCCTCGCTGGCCGGAAAGTACAGAGGTA
GTTCGGTTACAAGTTTGAGAGTTTAGCATGTTCGCGATCGATCTTACTGCGTGTGGTTCG
GTAGTGGTCCTTGGGAGATGTGCGGCGTGACCTGGTGGCGGTGCTCGCGCGCGATGTGGC
GCCGCACGGTGTTGTTGCGCGTGAAGGTGCGCGAGCAGTGCGGACAAGGCACCCTGATGC
CCTGATGCCGCTGCCTGATGTGGGCCCGTAGATTTGTCTCGTATCCGTATAGTCTCTCGC
AATATGGGCATTTCAGTTTCTTTCCGTCAGCAGTAGCAATTCCTCCAGATTTGCTGGTTA
TTATTTTCGTTGGCCAAATGTCGGGGCTTTGTTTGGGTGGCACCGAAGTCTCTATCGGCT
TCTCATGGTAGTTGGTGCCGGTAATGGACGGCGCCGGTGGCGGCGAATTGTTGTACCCCC
CACTTGGGTGGTAATCATTATCATTTTTAACCCGTAAATCTTCAGCACCCTGGTCGTTTG
GCAAGCGTTCCATTATTTCGTCGTTAGCGGATGCACTGCGTTCGTAGCCGTTGTTCTTAA
CCGGATTGCCGTGGGTCGATGTGCAGTCTGGGGGGTTCTCCTCATATCTAGCACTAGCTC
CAGGCGATGAACGGGTGTCCGGCTCGTCGGCGACACTCCCGCAGTGCGATGATGAAGAAC
TTTGCCTGTAATTCCTTGTGATCGGACTCTGGCATGGAGAGGACTTTGGAGGCGCTGGTC
GGCGGTGAGACGGGTGTATTGGCAAGTGGTGGCCGGAGGGCGCAAATCGCCCTATGTTTC
CACCGCTATGGATGGGCAGTCCATATTGGGGCATAATTGGAGCGAAAGTGGTATTGTGGG
GTTGCAGAGGGGTAGACTCTTGGACCTCACAATTCCCCGACCCTGATACCGGACTTGTCT
TTATACGTGTTTGGTGACGTTCTCCAGATGATTGCTGTGTTTGTTGTTTTACCCAAGCAT
CCTGGGACATTTCCATAGACAGACCCTTGACCTGTAAATTCTCGCCGCTTTTAAGAAAGC
TTGAAAGGGCATCCTGGCTGACGTGTACCTCGCCCTTGTACATGAATTCGAGGAGGGCCT
GCATGTTGTCGGCAGTGGTAGCCTCCAAAATGACATAACAAGCGCCCGCATGGCTAGGTG
GCGCCGTGTCGAATAACTCTTGAAAATGTTTACTGCACGCGGCCAGTATCACCTTATGCG
CTTTGAATTGGCGACCTTCGCAGTAGAGCGTGACATCGGCGAGACTCTCCGAATTCCAGA
GGTTCGCGAATGACGTGGCGAGGTTCGAACCGAAGCTGTTCCATTTTAGGCAGTACTGTT
GCTGCTGCGAGTCCATGCCCGGGCCGCCTCGAATGCCTGCCCTCGATTCCATTTCGCTAA
TTCCACAGTCCTCGTATCGTTATATATTTAAACCATCAGAGCTCTAATGAGCCGTTCACA
ACTATCATAGTTTGTATCACTTGGTGTCCGTCAATCAGCTCACAACACTCGAGGCACACA
GGCTTAGTTAGTTAGGGTCGGTGTGATTACTTCCGCATGTTGCAGCGCTCGCGACGCGCG
TGTGTGTAGGGCCGTACGCGTTCGCTCCTAGCCGCGGGGAGCCTCGCTCGCGAATGCGAC
CGCCGAAAACTCTTCGCGCCGTCCGAATGCAGAAAATTCGGACGCGTCGAGTGGGGGACG
CTCTACGACTATCCAAAACTTGTGCGCGTACGTGCACTGTGTTTCGCTATGAAAAAAAAA
AAAAAATAACAGCCAAGGTTAACGCGCGATGCCAAAAAAAGACGCACGGAAAATGAAAAA
AGACGGCTAGAGCGGTGGTGCCCCTCGCGGGCCCTCGTGATGCAGCCGATTCTGCACACG
CCGTGGCACGCACCTACTTCGCATATACAGCGCGCTACATTCACCTGCGACTCGTTAACA
ATGCATTAGAACATTTTTGAATGCGCAAATACACGTTCTAACAAATACTTCTGTTTCATT
ACGGTTAATGACTTCAATATTATTATCTAATGAACTTGTATTGAGCGCCAAAAGTCAATG
TACGAAATGCTTTTGGATTAATTCAATGATTTTCGTAATTTCAATAGATAAGTCGTATTT
TATTGGACGCGTTCCAGTTTCAAGTTTGTGACATCAAACAGCCGCTAATGCTGAACGTAA
AACATTATGCAAAATATTAAATTGAATGCGGCACGTGTAAGTTTCTAGTGCCTCACTAAG
AAGTACTTTGTGCAAAAACAACGAATAATTGGCCAGTAAAATTTTCAAGTCAGGCTAATT
AATAAAATGTAGTATATAAAGTAATAAAGTGTAATAGTAAAATGTTCTATGTTCAAGCTA
ATTAGTCTTTGATTTCAATTTAACAATTTCCATAATGAACACAAAATAAGGTGATTTATT
TTTCTACTACGTATATTCATTCGGTACGCCAAAAATGTCTTCGGAAGAAGCTAATCCCAT
TTACGAATTAAAACGTAAATATATGCGCTGAATTGATACAATCTTGACTGTATCATGTCA
TTATAAAATGCTGTTAATGTTATTGTTTTACTTTTATAACAATGCACGGGGGTATGTGTA
CAATTTCTAATTTAGATTTATTTTTGCGGTATAAAAAGTAGCTTCGATCACTGTCGGGTG
CATCAAAGATCAATTTAAATCATAGATCCATTGCTATGTAAACTCAAGAACCAGTAAAGG
TACACTATAGCATTATGATTATAAACCAATTAAAAGTAATTTACTAATGACTGTATAATA
AACTGACATTTAGAACTTACTCTTTTAAATTATCTATTTCTTTAATTAAATTTTTAGTTT
CAATATTATAGATAATAAACTATCTTCAACAAAATACTATCAACCATTGTTACTGAGTCG
ACAACAAACATAAAAACTTTCATACTTTTATTATTAGTATAAAT
(5624 bp)

- SilkBase 1999-2023 -