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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN30269_c4_g9_i1
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		periodic_tryptophan_protein_2_homolog_[Bombyx_mori]
Ontology
GO:0000028 P ribosomal small subunit assembly
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0030515 F snoRNA binding
GO:0032040 C small-subunit processome
GO:0034388 C Pwp2p-containing subcomplex of 90S preribosome
GO:0044822 F RNA binding
Transcript
Level		FPKM:5.09 TPM:2.83
ORF EntryO_BomoIG1680_complete:A_BomoIG_DN30269_c4_g9_i1
Sequence
(Nucleotide)
CAGCATTGACAGCTATCTATCAGTGACAGGAAATGTAAAAACAAATAGATTCACATTGTG
GTTCTAAGTTTATTTATGAACCGAACACAATTTCACGATGAATATGGTGTGATTCTTTAT
GCAGTTGTTTCAAATATTAAGAGCAAATTCAATAGAATTATTACATAGTTACGAAGCACT
TTAGTCACCATGAAGTTTAATTATAAGTTTCAAAATTTACTCGGAACAGTTTACCGTAAA
GGTGATGTGCTCTTCAGTAAAGATGGAAATTGCGTTATCAGTCCAGTTGGTAACAGAATA
ACCATATATAATTTGAAACAGAATAAAAGTAACACTCTATCATTTGAAAGTCACTACAAT
TATACAGCTGTTGATATTGCACCAAATGGAATGACATTGTTGGCTGTTACGGAAAAGGGT
GAAGCACAAATTATAAGTCTTACAACTTCTGTGGTGTTACACAAGTATAAGTTCAAGCAG
CAAGTGAATGCGGTTAAGTTTAGTCCTGATGGAAAATACTTTGCCGTGTGCTGCGATAAT
ACAGTATTCGTGATGACAGCACCGGTACATTTCACCGGCGAATACCGGCCCTTCATCATG
AAACGTGTCTTCAAGAAAGCCCTAGACGAAGTGACGTGTCTGGACTGGTCGTCCTGCTCG
AGACTCCTGGCGGTCGGATCGAAAGACACGACAACGAAGATTCACACCGTCGAATATTTA
GAGAACATCACTATGTATTCGCTCAGCGGACACACAGATAAAATTATCGGTGTCTTCTTC
GAGAGGAAAAGCTTAGATCTGATAACGGTCAGTAGGAACGGTCAGCTGTGCTTGTGGGAG
GCCAGTATAGATGCCGATGAGCTTGCAGTGAAGCAGGATGACACGTCGCGCAAGAAACGA
GTGAGACTGCAGAACGAGGGTAATCTAGAGGAAGAATTTGACGCAAAGGATGATATTGAG
AAAGAAAAGGAATATGACAGCGACAGAGACGCGGAACAAGAACAGAACAATTCGAAGGTT
AACTCTGAAGAGAACGATAAGAGATTGATGTACAAAAAACTGGGGAGGCACTACATCGGC
GATGCGATACGCAACGCCGATCGGAAGGTCAAGCTCACGGCCGTTCAGTACCACAAGGAG
AATAAGCTGCTAGTGACCGGTTTCTCGAGCGGTCTGTTCTTCTTGCACGAGATGCCGGAC
GTGAATCTGATCCACACGCTCAGCATATCGGAGCACCGCATCAGCAGCATCAGCGTGTCG
CCGCCCGGGGACTGGATCGCGTTCGCCTGTCCCAACATCGGTCAGCTGCTGGTCTGGGAG
TGGCAAAGCGAGCAATACGTGATGAAGCAGCAGGGTCACTCGTTGGACATGACGTGCCTG
GCGTACTCGCCGGACGGGCTGCACGTCGTGACCGGGGGTTTCGACGGTAAAGTGAAGGTC
TGGAACACGACGAACGGCTTCTGCTTCGTGACCTTCCACGAGCACAAGGCGACCGTGAGC
GGCGTCACGTGCAGCGCCAACAAGAAGTTCTTCGTGTCGTCGTCGCTAGATGGCACTGTA
CGATGCTACGACTTGACCAGATACCGCAACTTCCGTACGCTGACGTCACCCAGCCTGGTG
CAGTTCAGCTGTGTGGCGCTGGACTCCAGCGGAGAGTTCTGTGCGGCCGGCGGTCAGGAC
GTCTTCGAAATATTCGTTTGGTCGATCAAGTTCGGGAAGTTGCTAGAGGTTCTAGGTGGT
CACGAGGCGCCGGTGTCGAGTCTCGCGTTCAGCCCGACGCTGACCAGCACGCGCCTGGCC
TCCGCCAGCTGGGACGGGACGGTCCGTCTGTGGGACTGCATCGACCGGGAGGTGCAGTGC
GAGCCGATCCGACTCAACTCTGACGCGCTGCAAGTCGCCTTCAGACCCGACGGGGAAGAG
ATCGCGGTGTCGACCCTGGACGGCAACATAACGTTCTTCGAGCCGAGCACGTGCGAGCAG
ACGGGTAGCGTGGAGGGCAGGTCCGACCTGGGCTCTGGGAGGGCAGAAACCGACCTGGTC
ACGCCGCAGACACTCTTGAAAACCAAAGCGTTCACAACAATATGCTATTCTGCTGACGGT
ACCTGCATACTGGGAGGCGGCAACTCGAAGAACGTTTGTCTTTATAGCGTGAAGGATTCC
GTACTCATCAAGAAGTTTGTCGTCACGGAAAATAGATCTTTGGATGCTGTTAATGACTTT
GTGAATCGCCGCAACCTCACGGAGTTCGGGAATATGGCGCTACTGGAAGAGAGGGAGGAT
CTGGAAGGAGGAAACGTCAACATCCGATTGCCGGGCGTCAAGACCGGGGACATGGCCGAT
AGGAACGTCAAACCTGAGGTCCGCGTGTACTGCGTCCGGTTCTCGCCGACCGGGGAGAGC
TTCGCGGTGGCCGCCACGGAGGGCCTGATGCTGTACAGCCAGAACGCCGGCCTCGACGGT
ACTTTCAGGCCGTATCGACTGGAGGCGACGTCAACGCCGGCCGCGGTGAGGCAGTCCCTC
CGAGACGGCGCCTGGGGCTCCGCCCTCACCGGCGCCCTACAGCTGGCGGAGCAAGCGCTC
ATACAGGAGTGCCTTGAATCTGTGCCCACTAAAGACATATCCCTAACGGTATCGAGTCTA
GACGAAGACTACGGCGACCGGCTGCTGAGCACGATAGCGCGCCTCCTCGAGGACAGCAGG
CACGTGGAGCAGCTGCTGCACTGGACCACGGCGCTCGTGTCGACGGGGAGACACAAGTTC
CCGCCGAGCGCGCTGCTCGCCGTAGAGAAAGTTCTGACCGTCAAATACTCGCAGTTGAGT
AAAATATGTGATTTCAACAAATATACGATAAGGTGCATAAAGACCGTCGGAGATGTGGTC
TTAAAACGAGAAGAAGTTGAGCCCATGGACACTGACGGACCAACGTCCTCTGATTCTGAA
TAAAATATGTTATTGTCATGATAAAAAAAAAAAA
(2974 bp)

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