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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN30253_c4_g3_i7
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		ubiquilin-1_isoform_X1_[Bombyx_mori]
Ontology
GO:0000502 C proteasome complex
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0005783 C endoplasmic reticulum
GO:0005886 C plasma membrane
GO:0006914 P autophagy
GO:0016020 C membrane
GO:0016235 C aggresome
GO:0016241 P regulation of macroautophagy
GO:0019900 F kinase binding
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0031396 P regulation of protein ubiquitination
GO:0031398 P positive regulation of protein ubiquitination
GO:0031410 C cytoplasmic vesicle
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0034140 P negative regulation of toll-like receptor 3 signaling pathway
GO:0034976 P response to endoplasmic reticulum stress
GO:0035973 P aggrephagy
GO:0042802 F identical protein binding
GO:0043234 C protein-containing complex
GO:0048471 C perinuclear region of cytoplasm
GO:0071456 P cellular response to hypoxia
GO:1901097 P negative regulation of autophagosome maturation
GO:1901340 P negative regulation of store-operated calcium channel activity
GO:1902175 P regulation of oxidative stress-induced intrinsic apoptotic signaling pathway
GO:1903071 P positive regulation of ER-associated ubiquitin-dependent protein catabolic process
GO:2000785 P regulation of autophagosome assembly
Transcript
Level		FPKM:10.92 TPM:6.08
ORF EntryO_BomoIG1373_complete:A_BomoIG_DN30253_c4_g3_i7
Sequence
(Nucleotide)
TTATGAATGTTTCTGATCATAAATATTAAAATATTTTTAAAGAAATTTTAAAATAAAACT
AAGCCTCACCTTTCCAGTCACTTATGAATTTATAATTTAATTAGTTAATTAATTGGTACA
CAGTTTTTGACAGTTTATATAATTTATTGCAATTTGTTAATATTATATTGCTGAGAAGAT
ACAATTGCTAAGATATTCTAGCTGATTGTTGTGTAACAACTATCTATTACTTCATCATAC
ATACAGTTTACTAAGTTTATTCTATAAAATGCTATGTAGTTTTTATAATACCATATGCAT
GGTAGTGCAAAAGATTTTTCAGTGGAAAAGCAAACTATTTACATAAACTTATTCTTAATT
TGACGTTTCATAACGCAAATCTACTAAAACGTCCGTGTTATTAAAATAATGTAACAAAGA
AAATAATTAAACTAATTAATAGAAATAGAAATAAATTTCTATACAAATACAGTTGTAGTG
TACAAAATATTGATTTTATATCATCGCTACGTAAAATCAGTGAGTAATGAGTGACTTGTA
AACAAAAACTTCTGAATTGTTTACTACCAAAGGAATGAATAAAAATTAAATAAAGACACC
TTTTACCTTTATTAAGTCTAATTACTACAGTAACATACCACAATTTTTAACTACTATCAA
TCAATTTGGGTACTAGTTTGGAATAAATGAAATTAAATTAAAATTTGTATTATGAAGCAA
AAAAAGGGCAAATATTTCATAAAAACGTTTCCCCCAAAACCATTATATTTTAATATAAAC
TTTTTCGTGACCGCTGTCTTTTCAAACACGTTATACTAAAGCAATCATACATTAAAAATG
ATGCATCAGAGTAGGAATGTAAATTTGGACATCTGCCTGGACTATTTTAACGCTAAGAAA
TTGATGACGAATTAGAAACTATTAAATTTGAACGTTAAATAATGTGACCATAGGTGTAAA
AGTCTGAGAACTTTAACAAAAAAATTTATTGTTTTATTCTACAATTTTTAGGTGTCAAAA
ATATATGTATTAAAATGATAATGCAAAAAACTGAATGATCAACATCTAAATGCAATATTT
GTAAAAGACAGTGGCGTTATAGGATGAAACAAACGTTATCGCTTTATCGCTGACAGGGCG
CGGTAGTGTTAGCTCATGGAGAGCTGACCAAGCGCCAGTAGCCTCTCCACCGCCGCGTTT
ACATCCCCAAATGTCGCGATTAGAGCTTGTAAATTGGCCTCCCTATTCAGGAAGCCCATG
GCAGCCAGTTGCTCCAATTGTTGGGAATAACGTTGCTCAGGGGGCTGCTGTGTGTTCGTC
TGGTTGTTCGACATGGCCGACATCATCCGTTGCATAAACTGCGTGAAGAGTTCAGAATTG
TTTTGTTGTCGTGCCTGGGCGGGGTTCTGGGCAGCGCTGGGCGGTTGGGCCGGCGGCGTG
GCGGCGGCGGCGCCCACGCCCATGCCCAAGTTGTTGACAAGGCTGGGCGCCGCTGTACGC
AACTGTTCCATGCCTTGTTGTATTTGTAGCAGAGCATTCAACGCCTGCGGATTAGACATC
ATCTGTTGCATTTCAGGGTTCTGTAGCTGAGCGAGAAGTTGCGGCATCATTGTGCGGATT
TGGTCTTGAAGTTGCGGATTGTTGGCGAACATTGGATTCTGATTAATTAGTTGAGATGCC
ATTTCGGGGTCAGCACTAAGGGCCTGTAACATGGAGTTGGTGTATGGCGCAGAGAGCATA
GACTGGACAAGGCGAGGATTTTCTGACATCTGTTGCAGAAGAGATTGCATGCCGGGTGTA
TTGATGAGGCCGGGACCGGAGCCCGAGCCGGCCGCAGAGGCACTGCCCTGGGAAGCTCCG
CCGCCGCCTCCTCCTCCACCACGCTGCCACGGGTTGGGTAGCGGCTGCCTGTTCTCAGAT
CCTTGCTGCGGGTTTGTGCCGTCTGCAGAATTGTCTACGAGTCCAGAGAAAGGGTTCCCT
GCCATGCTACTGGCCACATTGAGCATCGGTTCCTGTATGTCCCTATACATTCTTTGGAGC
GCATTGTAACCACCTGGTATACTTTCGAGATTGGAGAGGGCGCGGTCGTGTGAGCGCATC
AACTCTTGCAACATAGCGGGGTTGCGAGCCAACTCCATAGTTTGACGTAATAATTCAGGA
TTGTTTAACATATGACTGATTTCTGGATTTCTAGACATGAGATCTTGCATTTGTGGGTTG
GAGGTGATGAGGCTACGCATATTCTCAGGATCATTCATCATCTGCTGCACCAATGGATTG
TCTAAGACTTGTCTGAGCATATCAGGGTTGGACAGAAGTTCCTGTTGCATTCTAGCCTGG
AGATCCATAAAAGTACTCTGACCAAGGCCCAAGCTTTCAAGACCCGCCAGCCCACCCAGC
GAGTTTAAACCAAATGGTGTAGCACTGACGTCAGCTGGGGGTCTACGAGCCGCACCCTCC
GGTTCTGGTCTTGGAGGAGCTTTAATCACTAGATGCACTGTCAACCCATCTTTGATGTTG
TGTTGCTTCAGGGTATCGGCATCATTCATGATTTTCCCGGCGAAAATAAGACATAATTGT
TCTGGTTCTGTACTGAATTTTGAAGACAACACTTCTTTGAGTCTTTTGATATCGGCATCT
TCCTCAATTTCAACTTGCTGCTTCTCTTTCGGGGTTTTAACTGTGATCGTAATTTTTTTA
GGGTCGTCTTGTCCCTCTGCCATTTTGGCAATTCTAGAATGACTATGTACTTTGGCGGAA
AAGTAAAATTTATACGAGAAAGACAAATTGACGAATAGCGTTGACTTGTATATTGTCTAT
GGGTCAGTATGACGGCTAACTAGTAGTGCTGCCA
(2854 bp)

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