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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN30253_c4_g3_i6
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		ubiquilin-1_isoform_X1_[Bombyx_mori]
Ontology
GO:0000502 C proteasome complex
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0005783 C endoplasmic reticulum
GO:0005886 C plasma membrane
GO:0006914 P autophagy
GO:0016020 C membrane
GO:0016235 C aggresome
GO:0016241 P regulation of macroautophagy
GO:0019900 F kinase binding
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0031396 P regulation of protein ubiquitination
GO:0031398 P positive regulation of protein ubiquitination
GO:0031410 C cytoplasmic vesicle
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0034140 P negative regulation of toll-like receptor 3 signaling pathway
GO:0034976 P response to endoplasmic reticulum stress
GO:0035973 P aggrephagy
GO:0042802 F identical protein binding
GO:0043234 C protein-containing complex
GO:0048471 C perinuclear region of cytoplasm
GO:0071456 P cellular response to hypoxia
GO:1901097 P negative regulation of autophagosome maturation
GO:1901340 P negative regulation of store-operated calcium channel activity
GO:1902175 P regulation of oxidative stress-induced intrinsic apoptotic signaling pathway
GO:1903071 P positive regulation of ER-associated ubiquitin-dependent protein catabolic process
GO:2000785 P regulation of autophagosome assembly
Transcript
Level		FPKM:66.49 TPM:37.02
ORF EntryO_BomoIG1371_complete:A_BomoIG_DN30253_c4_g3_i6
Sequence
(Nucleotide)
GGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCTGTTTGGAATA
AATGAAATTAAATTAAAATTTGTATTATGAAGCAAAAAAAGGGCAAATATTTCATAAAAA
CGTTTCCCCCAAAACCATTATATTTTAATATAAACTTTTTCGTGACCGCTGTCTTTTCAA
ACACGTTATACTAAAGCAATCATACATTAAAAATGATGCATCAGAGTAGGAATGTAAATT
TGGACATCTGCCTGGACTATTTTAACGCTAAGAAATTGATGACGAATTAGAAACTATTAA
ATTTGAACGTTAAATAATGTGACCATAGGTGTAAAAGTCTGAGAACTTTAACAAAAAAAT
TTATTGTTTTATTCTACAATTTTTAGGTGTCAAAAATATATGTATTAAAATGATAATGCA
AAAAACTGAATGATCAACATCTAAATGCAATATTTGTAAAAGACAGTGGCGTTATAGGAT
GAAACAAACGTTATCGCTTTATCGCTGACAGGGCGCGGTAGTGTTAGCTCATGGAGAGCT
GACCAAGCGCCAGTAGCCTCTCCACCGCCGCGTTTACATCCCCAAATGTCGCGATTAGAG
CTTGTAAATTGGCCTCCCTATTCAGGAAGCCCATGGCAGCCAGTTGCTCCAATTGTTGGG
AATAACGTTGCTCAGGGGGCTGCTGTGTGTTCGTCTGGTTGTTCGACATGGCCGACATCA
TCCGTTGCATAAACTGCGTGAAGAGTTCAGAATTGTTTTGTTGTCGTGCCTGGGCGGGGT
TCTGGGCAGCGCTGGGCGGTTGGGCCGGCGGCGTGGCGGCGGCGGCGCCCACGCCCATGC
CCAAGTTGTTGACAAGGCTGGGCGCCGCTGTACGCAACTGTTCCATGCCTTGTTGTATTT
GTAGCAGAGCATTCAACGCCTGCGGATTAGACATCATCTGTTGCATTTCAGGGTTCTGTA
GCTGAGCGAGAAGTTGCGGCATCATTGTGCGGATTTGGTCTTGAAGTTGCGGATTGTTGG
CGAACATTGGATTCTGATTAATTAGTTGAGATGCCATTTCGGGGTCAGCACTAAGGGCCT
GTAACATGGAGTTGGTGTATGGCGCAGAGAGCATAGACTGGACAAGGCGAGGATTTTCTG
ACATCTGTTGCAGAAGAGATTGCATGCCGGGTGTATTGATGAGGCCGGGACCGGAGCCCG
AGCCGGCCGCAGAGGCACTGCCCTGGGAAGCTCCGCCGCCGCCTCCTCCTCCACCACGCT
GCCACGGGTTGGGTAGCGGCTGCCTGTTCTCAGATCCTTGCTGCGGGTTTGTGCCGTCTG
CAGAATTGTCTACGAGTCCAGAGAAAGGGTTCCCTGCCATGCTACTGGCCACATTGAGCA
TCGGTTCCTGTATGTCCCTATACATTCTTTGGAGCGCATTGTAACCACCTGGTATACTTT
CGAGATTGGAGAGGGCGCGGTCGTGTGAGCGCATCAACTCTTGCAACATAGCGGGGTTGC
GAGCCAACTCCATAGTTTGACGTAATAATTCAGGATTGTTTAACATATGACTGATTTCTG
GATTTCTAGACATGAGATCTTGCATTTGTGGGTTGGAGGTGATGAGGCTACGCATATTCT
CAGGATCATTCATCATCTGCTGCACCAATGGATTGTCTAAGACTTGTCTGAGCATATCAG
GGTTGGACAGAAGTTCCTGTTGCATTCTAGCCTGGAGATCCATAAAAGTACTCTGACCAA
GGCCCAAGCTTTCAAGACCCGCCAGCCCACCCAGCGAGTTTAAACCAAATGGTGTAGCAC
TGACGTCAGCTGGGGGTCTACGAGCCGCACCCTCCGGTTCTGGTCTTGGAGGAGCTTTAA
TCACTAGATGCACTGTCAACCCATCTTTGATGTTGTGTTGCTTCAGGGTATCGGCATCAT
TCATGATTTTCCCGGCGAAAATAAGACATAATTGTTCTGGTTCTGTACTGAATTTTGAAG
ACAACACTTCTTTGAGTCTTTTGATATCGGCATCTTCCTCAATTTCAACTTGCTGCTTCT
CTTTCGGGGTTTTAACTGTGATCGTAATTTTTTTAGGGTCGTCTTGTCCCTCTGCCATTT
TGGCAATTCTAGAATGACTATGTACTTTGGCGGAAAAGTAAAATTTATACGAGAAAGACA
AATTGACGAATAGCGTTGACTTGTATATTGTCTATGGGTCAGTATGACGGCTAACTAGTA
GTGCTGCCA
(2229 bp)

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