SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN30230_c3_g9_i3
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		tRNA-splicing_ligase_RtcB_homolog_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003972 F RNA ligase (ATP) activity
GO:0005524 F ATP binding
GO:0006388 P tRNA splicing, via endonucleolytic cleavage and ligation
GO:0006396 P RNA processing
GO:0008033 P tRNA processing
GO:0008452 F RNA ligase activity
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
GO:0072669 C tRNA-splicing ligase complex
Transcript
Level		FPKM:0.00 TPM:0.00
ORF EntryO_BomoIG1407_5prime_partial:A_BomoIG_DN30230_c3_g9_i3
Sequence
(Nucleotide)
CCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCTCTTAATTTAACAGTTTTT
TTGCTAATACCAGCAGCATGACATGTATCTACGACATCTGTTACATTCTTGTATGACTCT
GGTGCCTCTTCCATTACTAGTTTTGGAGATGCAACTCTAATGGAAATACCCATAGTTTCA
AGTTTGTTTAGAACTTCTTTGTAGTCTATGTTTCTTCTAGACTTGGCTCTAGACAGAGCT
CGACCAGCACCATGGCATGTGGATCCAAACGTTTCTGTCATTCCTTGATGAGTACCAGTT
AGTACATAACTGCAGGTTCCCATTGTACCACCAATAAGTACAGGCTGACCAGTTAGTTGA
TAATCCACAGGTATTAATGGATGATTTGGTGGGAATGCTCTAGTTGAGCCCTTCCTATGT
ACTAGTAGAGTTTTCAATTTCCCATCTACTACATGTTCTTCAACCTTGGCAATATTATGA
GACACATCATATATGACATGCATGTCAAGATCATCAGGTGCCATTTTAAATTGCTTCGCA
AAAGCTTGACGGGTCAAGAATGTCATTGAGCTACGGTTCACCCAAGCAAAATTGGCAGCA
GCAGACATAGCTTTAAGATAATCTTGACCTTCAACAGATTTTATCCTGGCACATGCAAGT
TGTCTATCATTAGTTTCTATGTTATCTCTCTTCATAGCTTTCTCCATTTGCACTAAAGCA
TCAGTTGCTACTTGATGCCCAAAACCACGACTTCCAGAGTGAATCATCACACAAACTTGA
CCAATACTTTCAATACCCATTTTTCCAGCAGCATATTTATCAAATATTTCATCAACAACA
GATCGGAAGAGCA
(853 bp)

- SilkBase 1999-2023 -